RNA–Protein interactions for RNA: ENST00000451645.1

USF1P1-201, Transcript of upstream transcription factor 1 pseudogene 1, humanhuman

BASIC

Gene USF1P1, Length 526 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P1-201ENST00000451645 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
USF1P1-201ENST00000451645 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
USF1P1-201ENST00000451645 ABCC9O60706 1549 aa22.62■■□□□ 1.21
USF1P1-201ENST00000451645 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
USF1P1-201ENST00000451645 MYO15BQ96JP2 1530 aa22.18■■□□□ 1.14
USF1P1-201ENST00000451645 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
USF1P1-201ENST00000451645 NACADO15069 1562 aa22.14■■□□□ 1.13
USF1P1-201ENST00000451645 RB1CC1Q8TDY2 1594 aa22.08■■□□□ 1.13
USF1P1-201ENST00000451645 DCAF8L2P0C7V8 631 aa21.8■■□□□ 1.08
USF1P1-201ENST00000451645 UNC13AQ9UPW8 1703 aa21.59■■□□□ 1.05
USF1P1-201ENST00000451645 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
USF1P1-201ENST00000451645 SHROOM4Q9ULL8 1493 aa21.35■■□□□ 1.01
USF1P1-201ENST00000451645 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
USF1P1-201ENST00000451645 PABPN1Q86U42 306 aaKnown RBP eCLIP21.04■□□□□ 0.96
USF1P1-201ENST00000451645 DNAJC5BQ9UF47 199 aa20.95■□□□□ 0.94
USF1P1-201ENST00000451645 EIF4G1Q04637 1599 aaKnown RBP20.76■□□□□ 0.91
USF1P1-201ENST00000451645 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
USF1P1-201ENST00000451645 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
USF1P1-201ENST00000451645 CC2D2AQ9P2K1 1620 aa20.57■□□□□ 0.88
USF1P1-201ENST00000451645 CECR2Q9BXF3 1484 aa20.56■□□□□ 0.88
USF1P1-201ENST00000451645 PEG3Q9GZU2 1588 aa20.49■□□□□ 0.87
USF1P1-201ENST00000451645 SMARCA2P51531 1590 aa20.47■□□□□ 0.87
USF1P1-201ENST00000451645 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
USF1P1-201ENST00000451645 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
USF1P1-201ENST00000451645 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
USF1P1-201ENST00000451645 NCAPD3P42695 1498 aa20.34■□□□□ 0.85
USF1P1-201ENST00000451645 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
USF1P1-201ENST00000451645 WIZO95785 1651 aa20.26■□□□□ 0.83
USF1P1-201ENST00000451645 BAZ1BQ9UIG0 1483 aaKnown RBP20.25■□□□□ 0.83
USF1P1-201ENST00000451645 TOP2AP11388 1531 aaKnown RBP20.16■□□□□ 0.82
USF1P1-201ENST00000451645 LAMC3Q9Y6N6 1575 aa19.85■□□□□ 0.77
USF1P1-201ENST00000451645 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
USF1P1-201ENST00000451645 PRDM2Q13029 1718 aa19.79■□□□□ 0.76
USF1P1-201ENST00000451645 CCDC88BA6NC98 1476 aa19.79■□□□□ 0.76
USF1P1-201ENST00000451645 CADPSQ9ULU8 1353 aa19.72■□□□□ 0.75
USF1P1-201ENST00000451645 CFTRP13569 1480 aa19.71■□□□□ 0.75
USF1P1-201ENST00000451645 NESP48681 1621 aa19.64■□□□□ 0.73
USF1P1-201ENST00000451645 PDS5BQ9NTI5 1447 aa19.63■□□□□ 0.73
USF1P1-201ENST00000451645 DNAJC5Q9H3Z4 198 aa19.58■□□□□ 0.72
USF1P1-201ENST00000451645 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
USF1P1-201ENST00000451645 ERCC6Q03468 1493 aa19.55■□□□□ 0.72
USF1P1-201ENST00000451645 FANCD2Q9BXW9 1451 aa19.51■□□□□ 0.71
USF1P1-201ENST00000451645 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
USF1P1-201ENST00000451645 THOC2Q8NI27 1593 aaKnown RBP19.46■□□□□ 0.71
USF1P1-201ENST00000451645 MRC2Q9UBG0 1479 aa19.41■□□□□ 0.7
USF1P1-201ENST00000451645 WDR62O43379 1518 aa19.38■□□□□ 0.69
USF1P1-201ENST00000451645 ABCC8Q09428 1581 aa19.36■□□□□ 0.69
USF1P1-201ENST00000451645 CUX2O14529 1486 aa19.34■□□□□ 0.69
USF1P1-201ENST00000451645 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
USF1P1-201ENST00000451645 URB2Q14146 1524 aaKnown RBP19.28■□□□□ 0.68
USF1P1-201ENST00000451645 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
USF1P1-201ENST00000451645 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
USF1P1-201ENST00000451645 CUX1P39880 1505 aa19.19■□□□□ 0.66
USF1P1-201ENST00000451645 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
USF1P1-201ENST00000451645 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
USF1P1-201ENST00000451645 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
USF1P1-201ENST00000451645 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
USF1P1-201ENST00000451645 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
USF1P1-201ENST00000451645 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
USF1P1-201ENST00000451645 FGD5Q6ZNL6 1462 aa19.08■□□□□ 0.64
USF1P1-201ENST00000451645 TARBP1Q13395 1621 aaKnown RBP19.05■□□□□ 0.64
USF1P1-201ENST00000451645 ABCA10Q8WWZ4 1543 aa18.97■□□□□ 0.63
USF1P1-201ENST00000451645 SOGA1O94964 1423 aa18.96■□□□□ 0.63
USF1P1-201ENST00000451645 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
USF1P1-201ENST00000451645 ABCA5Q8WWZ7 1642 aa18.91■□□□□ 0.62
USF1P1-201ENST00000451645 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
USF1P1-201ENST00000451645 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
USF1P1-201ENST00000451645 ZNF608Q9ULD9 1512 aaPredicted RBP18.85■□□□□ 0.61
USF1P1-201ENST00000451645 GAPVD1Q14C86 1478 aa18.8■□□□□ 0.6
USF1P1-201ENST00000451645 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
USF1P1-201ENST00000451645 GRIN2BQ13224 1484 aa18.79■□□□□ 0.6
USF1P1-201ENST00000451645 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
USF1P1-201ENST00000451645 KIF27Q86VH2 1401 aa18.78■□□□□ 0.6
USF1P1-201ENST00000451645 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.59
USF1P1-201ENST00000451645 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.59
USF1P1-201ENST00000451645 TDRD9Q8NDG6 1382 aaKnown RBP18.75■□□□□ 0.59
USF1P1-201ENST00000451645 CUL7Q14999 1698 aa18.73■□□□□ 0.59
USF1P1-201ENST00000451645 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
USF1P1-201ENST00000451645 ADAMTS12P58397 1594 aa18.7■□□□□ 0.58
USF1P1-201ENST00000451645 EEA1Q15075 1411 aa18.7■□□□□ 0.58
USF1P1-201ENST00000451645 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
USF1P1-201ENST00000451645 CHD1O14646 1710 aa18.65■□□□□ 0.58
USF1P1-201ENST00000451645 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
USF1P1-201ENST00000451645 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
USF1P1-201ENST00000451645 IGF1RP08069 1367 aa18.56■□□□□ 0.56
USF1P1-201ENST00000451645 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
USF1P1-201ENST00000451645 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
USF1P1-201ENST00000451645 CARMIL1Q5VZK9 1371 aa18.49■□□□□ 0.55
USF1P1-201ENST00000451645 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
USF1P1-201ENST00000451645 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
USF1P1-201ENST00000451645 KIF21BO75037 1637 aa18.48■□□□□ 0.55
USF1P1-201ENST00000451645 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
USF1P1-201ENST00000451645 NUP160Q12769 1436 aa18.47■□□□□ 0.55
USF1P1-201ENST00000451645 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
USF1P1-201ENST00000451645 CEP170Q5SW79 1584 aa18.43■□□□□ 0.54
USF1P1-201ENST00000451645 CTTNBP2Q8WZ74 1663 aa18.42■□□□□ 0.54
USF1P1-201ENST00000451645 CSRNP3Q8WYN3 585 aa18.42■□□□□ 0.54
USF1P1-201ENST00000451645 OSCARQ8IYS5 282 aa18.41■□□□□ 0.54
USF1P1-201ENST00000451645 FBLN2P98095 1184 aa18.4■□□□□ 0.54
USF1P1-201ENST00000451645 SHROOM2Q13796 1616 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms