RNA–Protein interactions for RNA: ENST00000451454.5

PITRM1-207, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 3

Gene PITRM1, Length 875 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-207ENST00000451454 NISCHQ9Y2I1 1504 aa34.67■■■■□ 3.14
PITRM1-207ENST00000451454 ABCC9O60706 1549 aa31.54■■■□□ 2.64
PITRM1-207ENST00000451454 CCDC180Q9P1Z9 1646 aa31.22■■■□□ 2.59
PITRM1-207ENST00000451454 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
PITRM1-207ENST00000451454 DNAJC5BQ9UF47 199 aa29.84■■■□□ 2.37
PITRM1-207ENST00000451454 NACADO15069 1562 aa29.61■■■□□ 2.33
PITRM1-207ENST00000451454 DCAF8L2P0C7V8 631 aa29.41■■■□□ 2.3
PITRM1-207ENST00000451454 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.29
PITRM1-207ENST00000451454 MYO15BQ96JP2 1530 aa29.12■■■□□ 2.25
PITRM1-207ENST00000451454 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
PITRM1-207ENST00000451454 BICRAQ9NZM4 1560 aa29■■■□□ 2.23
PITRM1-207ENST00000451454 ZCCHC6Q5VYS8 1495 aaKnown RBP28.67■■■□□ 2.18
PITRM1-207ENST00000451454 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
PITRM1-207ENST00000451454 DCAF1Q9Y4B6 1507 aa28.63■■■□□ 2.17
PITRM1-207ENST00000451454 CECR2Q9BXF3 1484 aa28.46■■■□□ 2.15
PITRM1-207ENST00000451454 CC2D2AQ9P2K1 1620 aa28.46■■■□□ 2.15
PITRM1-207ENST00000451454 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
PITRM1-207ENST00000451454 EIF4G1Q04637 1599 aaKnown RBP28.34■■■□□ 2.13
PITRM1-207ENST00000451454 DNAJC5Q9H3Z4 198 aa27.66■■■□□ 2.02
PITRM1-207ENST00000451454 NCAPD3P42695 1498 aa27.36■■□□□ 1.97
PITRM1-207ENST00000451454 CUX2O14529 1486 aa27.33■■□□□ 1.97
PITRM1-207ENST00000451454 ERCC6Q03468 1493 aa27.29■■□□□ 1.96
PITRM1-207ENST00000451454 ATAD2BQ9ULI0 1458 aa27.22■■□□□ 1.95
PITRM1-207ENST00000451454 SMARCA2P51531 1590 aa27.14■■□□□ 1.94
PITRM1-207ENST00000451454 HMGXB3Q12766 1538 aa27.12■■□□□ 1.93
PITRM1-207ENST00000451454 SMARCA4P51532 1647 aa27.09■■□□□ 1.93
PITRM1-207ENST00000451454 NESP48681 1621 aa27■■□□□ 1.91
PITRM1-207ENST00000451454 BAZ1BQ9UIG0 1483 aaKnown RBP26.95■■□□□ 1.91
PITRM1-207ENST00000451454 BAZ1AQ9NRL2 1556 aaPredicted RBP26.94■■□□□ 1.9
PITRM1-207ENST00000451454 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
PITRM1-207ENST00000451454 THOC2Q8NI27 1593 aaKnown RBP26.78■■□□□ 1.88
PITRM1-207ENST00000451454 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
PITRM1-207ENST00000451454 MROH2BQ7Z745 1585 aa26.7■■□□□ 1.86
PITRM1-207ENST00000451454 PDS5BQ9NTI5 1447 aa26.66■■□□□ 1.86
PITRM1-207ENST00000451454 KIF21AQ7Z4S6 1674 aa26.6■■□□□ 1.85
PITRM1-207ENST00000451454 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
PITRM1-207ENST00000451454 MRC2Q9UBG0 1479 aa26.44■■□□□ 1.82
PITRM1-207ENST00000451454 WDR62O43379 1518 aa26.37■■□□□ 1.81
PITRM1-207ENST00000451454 WIZO95785 1651 aa26.34■■□□□ 1.81
PITRM1-207ENST00000451454 TRIM41Q8WV44 630 aa26.33■■□□□ 1.81
PITRM1-207ENST00000451454 CEP164Q9UPV0 1460 aa26.28■■□□□ 1.8
PITRM1-207ENST00000451454 FANCD2Q9BXW9 1451 aa26.21■■□□□ 1.79
PITRM1-207ENST00000451454 CFTRP13569 1480 aa26.14■■□□□ 1.78
PITRM1-207ENST00000451454 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
PITRM1-207ENST00000451454 OSCARQ8IYS5 282 aa26.04■■□□□ 1.76
PITRM1-207ENST00000451454 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
PITRM1-207ENST00000451454 URB2Q14146 1524 aaKnown RBP26■■□□□ 1.75
PITRM1-207ENST00000451454 PRDM2Q13029 1718 aa25.77■■□□□ 1.72
PITRM1-207ENST00000451454 IFT140Q96RY7 1462 aa25.77■■□□□ 1.72
PITRM1-207ENST00000451454 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
PITRM1-207ENST00000451454 CCDC88BA6NC98 1476 aa25.72■■□□□ 1.71
PITRM1-207ENST00000451454 RIMBP3CA6NJZ7 1639 aa25.69■■□□□ 1.7
PITRM1-207ENST00000451454 RIMBP3BA6NNM3 1639 aa25.69■■□□□ 1.7
PITRM1-207ENST00000451454 RIMBP3Q9UFD9 1639 aa25.69■■□□□ 1.7
PITRM1-207ENST00000451454 TOPBP1Q92547 1522 aa25.67■■□□□ 1.7
PITRM1-207ENST00000451454 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
PITRM1-207ENST00000451454 ARHGEF11O15085 1522 aa25.6■■□□□ 1.69
PITRM1-207ENST00000451454 EIF4G3O43432 1585 aaKnown RBP25.56■■□□□ 1.68
PITRM1-207ENST00000451454 DNMBPQ6XZF7 1577 aa25.55■■□□□ 1.68
PITRM1-207ENST00000451454 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.674e-7■■■■■ 34.2
PITRM1-207ENST00000451454 CYB5RLQ6IPT4 315 aa25.44■■□□□ 1.66
PITRM1-207ENST00000451454 TARBP1Q13395 1621 aaKnown RBP25.44■■□□□ 1.66
PITRM1-207ENST00000451454 CHD1O14646 1710 aa25.4■■□□□ 1.66
PITRM1-207ENST00000451454 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
PITRM1-207ENST00000451454 FBLN2P98095 1184 aa25.38■■□□□ 1.65
PITRM1-207ENST00000451454 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
PITRM1-207ENST00000451454 RAD54L2Q9Y4B4 1467 aa25.3■■□□□ 1.64
PITRM1-207ENST00000451454 SOGA1O94964 1423 aa25.28■■□□□ 1.64
PITRM1-207ENST00000451454 TRHP20396 242 aaPredicted RBP25.27■■□□□ 1.64
PITRM1-207ENST00000451454 TDRD9Q8NDG6 1382 aaKnown RBP25.27■■□□□ 1.64
PITRM1-207ENST00000451454 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
PITRM1-207ENST00000451454 WDR97A6NE52 1622 aa25.19■■□□□ 1.62
PITRM1-207ENST00000451454 FGD5Q6ZNL6 1462 aa25.19■■□□□ 1.62
PITRM1-207ENST00000451454 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
PITRM1-207ENST00000451454 CLASP1Q7Z460 1538 aa25.14■■□□□ 1.62
PITRM1-207ENST00000451454 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.61
PITRM1-207ENST00000451454 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
PITRM1-207ENST00000451454 CUX1P39880 1505 aa25.11■■□□□ 1.61
PITRM1-207ENST00000451454 GRIN2BQ13224 1484 aa25.1■■□□□ 1.61
PITRM1-207ENST00000451454 SYNJ2O15056 1496 aa25.05■■□□□ 1.6
PITRM1-207ENST00000451454 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
PITRM1-207ENST00000451454 PBRM1Q86U86 1689 aa24.91■■□□□ 1.58
PITRM1-207ENST00000451454 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
PITRM1-207ENST00000451454 ABCA5Q8WWZ7 1642 aa24.86■■□□□ 1.57
PITRM1-207ENST00000451454 GRIN2AQ12879 1464 aa24.77■■□□□ 1.56
PITRM1-207ENST00000451454 AEBP2Q6ZN18 517 aaPredicted RBP24.77■■□□□ 1.56
PITRM1-207ENST00000451454 WRNQ14191 1432 aaPredicted RBP eCLIP24.75■■□□□ 1.55
PITRM1-207ENST00000451454 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
PITRM1-207ENST00000451454 ERCC6L2Q5T890 1561 aa24.71■■□□□ 1.55
PITRM1-207ENST00000451454 NUP160Q12769 1436 aa24.7■■□□□ 1.55
PITRM1-207ENST00000451454 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
PITRM1-207ENST00000451454 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
PITRM1-207ENST00000451454 FHAD1B1AJZ9 1412 aa24.65■■□□□ 1.54
PITRM1-207ENST00000451454 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
PITRM1-207ENST00000451454 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
PITRM1-207ENST00000451454 SHROOM2Q13796 1616 aa24.6■■□□□ 1.53
PITRM1-207ENST00000451454 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
PITRM1-207ENST00000451454 PRG4Q92954 1404 aaPredicted RBP24.5■■□□□ 1.51
PITRM1-207ENST00000451454 JPH4Q96JJ6 628 aa24.45■■□□□ 1.5
PITRM1-207ENST00000451454 KIF13AQ9H1H9 1805 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms