RNA–Protein interactions for RNA: ENST00000451391.5

IDH1-206, Transcript of isocitrate dehydrogenase (NADP(+)) 1, cytosolic, humanhuman

TSL 3

Gene IDH1, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH1-206ENST00000451391 NISCHQ9Y2I1 1504 aa46.29■■■■■ 5
IDH1-206ENST00000451391 CCDC180Q9P1Z9 1646 aa41.16■■■■■ 4.18
IDH1-206ENST00000451391 ABCC9O60706 1549 aa40.57■■■■■ 4.08
IDH1-206ENST00000451391 RB1CC1Q8TDY2 1594 aa38.95■■■■□ 3.83
IDH1-206ENST00000451391 DCAF8L2P0C7V8 631 aa38.91■■■■□ 3.82
IDH1-206ENST00000451391 NACADO15069 1562 aa38.87■■■■□ 3.81
IDH1-206ENST00000451391 MYO15BQ96JP2 1530 aa38.61■■■■□ 3.77
IDH1-206ENST00000451391 ZCCHC6Q5VYS8 1495 aaKnown RBP38.49■■■■□ 3.75
IDH1-206ENST00000451391 DCAF1Q9Y4B6 1507 aa38.33■■■■□ 3.73
IDH1-206ENST00000451391 PABPN1Q86U42 306 aaKnown RBP eCLIP37.94■■■■□ 3.66
IDH1-206ENST00000451391 UNC13AQ9UPW8 1703 aa37.77■■■■□ 3.64
IDH1-206ENST00000451391 BICRAQ9NZM4 1560 aa37.66■■■■□ 3.62
IDH1-206ENST00000451391 SCRIBQ14160 1630 aa37.52■■■■□ 3.6
IDH1-206ENST00000451391 DNAJC5BQ9UF47 199 aa37.45■■■■□ 3.59
IDH1-206ENST00000451391 SHROOM4Q9ULL8 1493 aa37.44■■■■□ 3.58
IDH1-206ENST00000451391 EIF4G1Q04637 1599 aaKnown RBP36.75■■■■□ 3.47
IDH1-206ENST00000451391 CC2D2AQ9P2K1 1620 aa36.63■■■■□ 3.45
IDH1-206ENST00000451391 CECR2Q9BXF3 1484 aa36.53■■■■□ 3.44
IDH1-206ENST00000451391 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
IDH1-206ENST00000451391 BAZ1AQ9NRL2 1556 aaPredicted RBP35.91■■■■□ 3.34
IDH1-206ENST00000451391 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
IDH1-206ENST00000451391 ATAD2BQ9ULI0 1458 aa35.86■■■■□ 3.33
IDH1-206ENST00000451391 SMARCA2P51531 1590 aa35.81■■■■□ 3.32
IDH1-206ENST00000451391 HMGXB3Q12766 1538 aa35.64■■■■□ 3.3
IDH1-206ENST00000451391 MROH2BQ7Z745 1585 aa35.62■■■■□ 3.29
IDH1-206ENST00000451391 PEG3Q9GZU2 1588 aa35.59■■■■□ 3.29
IDH1-206ENST00000451391 BAZ1BQ9UIG0 1483 aaKnown RBP35.55■■■■□ 3.28
IDH1-206ENST00000451391 RSF1Q96T23 1441 aaPredicted RBP35.22■■■■□ 3.23
IDH1-206ENST00000451391 WIZO95785 1651 aa35.14■■■■□ 3.22
IDH1-206ENST00000451391 ERCC6Q03468 1493 aa35.06■■■■□ 3.2
IDH1-206ENST00000451391 NESP48681 1621 aa34.99■■■■□ 3.19
IDH1-206ENST00000451391 LAMC3Q9Y6N6 1575 aa34.93■■■■□ 3.18
IDH1-206ENST00000451391 CADPSQ9ULU8 1353 aa34.88■■■■□ 3.17
IDH1-206ENST00000451391 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
IDH1-206ENST00000451391 PDS5BQ9NTI5 1447 aa34.83■■■■□ 3.17
IDH1-206ENST00000451391 CUX2O14529 1486 aa34.77■■■■□ 3.16
IDH1-206ENST00000451391 CFTRP13569 1480 aa34.58■■■■□ 3.13
IDH1-206ENST00000451391 CCDC88BA6NC98 1476 aa34.49■■■■□ 3.11
IDH1-206ENST00000451391 THOC2Q8NI27 1593 aaKnown RBP34.45■■■■□ 3.11
IDH1-206ENST00000451391 KIF21AQ7Z4S6 1674 aa34.44■■■■□ 3.1
IDH1-206ENST00000451391 FANCD2Q9BXW9 1451 aa34.42■■■■□ 3.1
IDH1-206ENST00000451391 CEP164Q9UPV0 1460 aa34.4■■■■□ 3.1
IDH1-206ENST00000451391 MRC2Q9UBG0 1479 aa34.39■■■■□ 3.1
IDH1-206ENST00000451391 WDR62O43379 1518 aa34.24■■■■□ 3.07
IDH1-206ENST00000451391 SUPT5HO00267 1087 aaKnown RBP34.21■■■■□ 3.07
IDH1-206ENST00000451391 PRDM2Q13029 1718 aa34.04■■■■□ 3.04
IDH1-206ENST00000451391 DNAJC5Q9H3Z4 198 aa34.03■■■■□ 3.04
IDH1-206ENST00000451391 URB2Q14146 1524 aaKnown RBP34.02■■■■□ 3.04
IDH1-206ENST00000451391 ABCC8Q09428 1581 aa33.91■■■■□ 3.02
IDH1-206ENST00000451391 TOPBP1Q92547 1522 aa33.81■■■■□ 3
IDH1-206ENST00000451391 DNMBPQ6XZF7 1577 aa33.73■■■□□ 2.99
IDH1-206ENST00000451391 IFT140Q96RY7 1462 aa33.72■■■□□ 2.99
IDH1-206ENST00000451391 POLA1P09884 1462 aaPredicted RBP33.51■■■□□ 2.96
IDH1-206ENST00000451391 ZNF608Q9ULD9 1512 aaPredicted RBP33.49■■■□□ 2.95
IDH1-206ENST00000451391 SOGA1O94964 1423 aa33.45■■■□□ 2.95
IDH1-206ENST00000451391 CUX1P39880 1505 aa33.43■■■□□ 2.94
IDH1-206ENST00000451391 OSCARQ8IYS5 282 aa33.4■■■□□ 2.94
IDH1-206ENST00000451391 FGD5Q6ZNL6 1462 aa33.39■■■□□ 2.94
IDH1-206ENST00000451391 TARBP1Q13395 1621 aaKnown RBP33.39■■■□□ 2.93
IDH1-206ENST00000451391 RAD54L2Q9Y4B4 1467 aa33.36■■■□□ 2.93
IDH1-206ENST00000451391 AQRO60306 1485 aaKnown RBP eCLIP33.33■■■□□ 2.934e-7■■■■□ 23.2
IDH1-206ENST00000451391 EIF4G3O43432 1585 aaKnown RBP33.29■■■□□ 2.92
IDH1-206ENST00000451391 TDRD9Q8NDG6 1382 aaKnown RBP33.26■■■□□ 2.92
IDH1-206ENST00000451391 WRNQ14191 1432 aaPredicted RBP eCLIP33.24■■■□□ 2.91
IDH1-206ENST00000451391 WDR97A6NE52 1622 aa33.2■■■□□ 2.91
IDH1-206ENST00000451391 ABCA10Q8WWZ4 1543 aa33.1■■■□□ 2.89
IDH1-206ENST00000451391 TOP2BQ02880 1626 aa33.09■■■□□ 2.89
IDH1-206ENST00000451391 FBLN2P98095 1184 aa33.08■■■□□ 2.89
IDH1-206ENST00000451391 GRIN2BQ13224 1484 aa33.07■■■□□ 2.88
IDH1-206ENST00000451391 GAPVD1Q14C86 1478 aa33.03■■■□□ 2.88
IDH1-206ENST00000451391 BIVM-ERCC5R4GMW8 1640 aa33.02■■■□□ 2.88
IDH1-206ENST00000451391 SYNJ1O43426 1573 aa33.01■■■□□ 2.88
IDH1-206ENST00000451391 MAGI1Q96QZ7 1491 aaPredicted RBP33■■■□□ 2.87
IDH1-206ENST00000451391 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
IDH1-206ENST00000451391 CHMP7Q8WUX9 453 aaPredicted RBP32.98■■■□□ 2.87
IDH1-206ENST00000451391 SYNJ2O15056 1496 aa32.87■■■□□ 2.85
IDH1-206ENST00000451391 ABCA5Q8WWZ7 1642 aa32.87■■■□□ 2.85
IDH1-206ENST00000451391 CHD1O14646 1710 aa32.82■■■□□ 2.85
IDH1-206ENST00000451391 TRIM41Q8WV44 630 aa32.78■■■□□ 2.84
IDH1-206ENST00000451391 PBRM1Q86U86 1689 aa32.76■■■□□ 2.84
IDH1-206ENST00000451391 ERICH3Q5RHP9 1530 aa32.7■■■□□ 2.83
IDH1-206ENST00000451391 ARHGEF11O15085 1522 aa32.68■■■□□ 2.82
IDH1-206ENST00000451391 FHAD1B1AJZ9 1412 aa32.68■■■□□ 2.82
IDH1-206ENST00000451391 RIMBP3CA6NJZ7 1639 aa32.63■■■□□ 2.81
IDH1-206ENST00000451391 RIMBP3BA6NNM3 1639 aa32.63■■■□□ 2.81
IDH1-206ENST00000451391 RIMBP3Q9UFD9 1639 aa32.63■■■□□ 2.81
IDH1-206ENST00000451391 KIF27Q86VH2 1401 aa32.6■■■□□ 2.81
IDH1-206ENST00000451391 CLASP1Q7Z460 1538 aa32.6■■■□□ 2.81
IDH1-206ENST00000451391 GRIN2AQ12879 1464 aa32.6■■■□□ 2.81
IDH1-206ENST00000451391 ADAMTS12P58397 1594 aa32.59■■■□□ 2.81
IDH1-206ENST00000451391 CYB5RLQ6IPT4 315 aa32.52■■■□□ 2.8
IDH1-206ENST00000451391 IGF1RP08069 1367 aa32.49■■■□□ 2.79
IDH1-206ENST00000451391 NUP160Q12769 1436 aa32.49■■■□□ 2.79
IDH1-206ENST00000451391 ARAP1Q96P48 1450 aa32.39■■■□□ 2.78
IDH1-206ENST00000451391 CEP170Q5SW79 1584 aa32.36■■■□□ 2.77
IDH1-206ENST00000451391 CARMIL1Q5VZK9 1371 aa32.3■■■□□ 2.76
IDH1-206ENST00000451391 CUL7Q14999 1698 aa32.28■■■□□ 2.76
IDH1-206ENST00000451391 JPH4Q96JJ6 628 aa32.25■■■□□ 2.75
IDH1-206ENST00000451391 KIAA0586Q9BVV6 1533 aa32.16■■■□□ 2.74
IDH1-206ENST00000451391 SHROOM2Q13796 1616 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms