RNA–Protein interactions for RNA: ENST00000451312.5

NUCB1-206, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-206ENST00000451312 NISCHQ9Y2I1 1504 aa45.54■■■■■ 4.88
NUCB1-206ENST00000451312 ABCC9O60706 1549 aa41.66■■■■■ 4.26
NUCB1-206ENST00000451312 CCDC180Q9P1Z9 1646 aa40.99■■■■■ 4.15
NUCB1-206ENST00000451312 DNAJC5BQ9UF47 199 aa39.71■■■■□ 3.95
NUCB1-206ENST00000451312 RB1CC1Q8TDY2 1594 aa39.32■■■■□ 3.88
NUCB1-206ENST00000451312 NACADO15069 1562 aa38.94■■■■□ 3.82
NUCB1-206ENST00000451312 PABPN1Q86U42 306 aaKnown RBP eCLIP38.75■■■■□ 3.79
NUCB1-206ENST00000451312 DCAF8L2P0C7V8 631 aa38.64■■■■□ 3.78
NUCB1-206ENST00000451312 UNC13AQ9UPW8 1703 aa38.38■■■■□ 3.73
NUCB1-206ENST00000451312 BICRAQ9NZM4 1560 aa38.31■■■■□ 3.72
NUCB1-206ENST00000451312 MYO15BQ96JP2 1530 aa38.26■■■■□ 3.72
NUCB1-206ENST00000451312 SHROOM4Q9ULL8 1493 aa37.65■■■■□ 3.62
NUCB1-206ENST00000451312 ZCCHC6Q5VYS8 1495 aaKnown RBP37.64■■■■□ 3.62
NUCB1-206ENST00000451312 CECR2Q9BXF3 1484 aa37.58■■■■□ 3.61
NUCB1-206ENST00000451312 DCAF1Q9Y4B6 1507 aa37.56■■■■□ 3.6
NUCB1-206ENST00000451312 CC2D2AQ9P2K1 1620 aa37.56■■■■□ 3.6
NUCB1-206ENST00000451312 SCRIBQ14160 1630 aa37.38■■■■□ 3.57
NUCB1-206ENST00000451312 EIF4G1Q04637 1599 aaKnown RBP37.36■■■■□ 3.57
NUCB1-206ENST00000451312 DNAJC5Q9H3Z4 198 aa36.79■■■■□ 3.48
NUCB1-206ENST00000451312 CUX2O14529 1486 aa36.1■■■■□ 3.37
NUCB1-206ENST00000451312 NCAPD3P42695 1498 aa36.04■■■■□ 3.36
NUCB1-206ENST00000451312 ERCC6Q03468 1493 aa35.94■■■■□ 3.34
NUCB1-206ENST00000451312 ATAD2BQ9ULI0 1458 aa35.85■■■■□ 3.33
NUCB1-206ENST00000451312 NESP48681 1621 aa35.66■■■■□ 3.3
NUCB1-206ENST00000451312 HMGXB3Q12766 1538 aa35.66■■■■□ 3.3
NUCB1-206ENST00000451312 SMARCA2P51531 1590 aa35.63■■■■□ 3.29
NUCB1-206ENST00000451312 SMARCA4P51532 1647 aa35.61■■■■□ 3.29
NUCB1-206ENST00000451312 BAZ1BQ9UIG0 1483 aaKnown RBP35.41■■■■□ 3.26
NUCB1-206ENST00000451312 THOC2Q8NI27 1593 aaKnown RBP35.35■■■■□ 3.25
NUCB1-206ENST00000451312 BAZ1AQ9NRL2 1556 aaPredicted RBP35.34■■■■□ 3.25
NUCB1-206ENST00000451312 PEG3Q9GZU2 1588 aa35.29■■■■□ 3.24
NUCB1-206ENST00000451312 LAMC3Q9Y6N6 1575 aa35.21■■■■□ 3.23
NUCB1-206ENST00000451312 MROH2BQ7Z745 1585 aa35.11■■■■□ 3.21
NUCB1-206ENST00000451312 PDS5BQ9NTI5 1447 aa35.06■■■■□ 3.2
NUCB1-206ENST00000451312 KIF21AQ7Z4S6 1674 aa35.05■■■■□ 3.2
NUCB1-206ENST00000451312 CADPSQ9ULU8 1353 aa34.9■■■■□ 3.18
NUCB1-206ENST00000451312 TRIM41Q8WV44 630 aa34.89■■■■□ 3.18
NUCB1-206ENST00000451312 MRC2Q9UBG0 1479 aa34.82■■■■□ 3.16
NUCB1-206ENST00000451312 WDR62O43379 1518 aa34.76■■■■□ 3.15
NUCB1-206ENST00000451312 WIZO95785 1651 aa34.59■■■■□ 3.13
NUCB1-206ENST00000451312 CEP164Q9UPV0 1460 aa34.54■■■■□ 3.12
NUCB1-206ENST00000451312 FANCD2Q9BXW9 1451 aa34.49■■■■□ 3.11
NUCB1-206ENST00000451312 CFTRP13569 1480 aa34.39■■■■□ 3.1
NUCB1-206ENST00000451312 OSCARQ8IYS5 282 aa34.37■■■■□ 3.09
NUCB1-206ENST00000451312 URB2Q14146 1524 aaKnown RBP34.28■■■■□ 3.08
NUCB1-206ENST00000451312 RSF1Q96T23 1441 aaPredicted RBP34.2■■■■□ 3.06
NUCB1-206ENST00000451312 TOP2AP11388 1531 aaKnown RBP34.14■■■■□ 3.06
NUCB1-206ENST00000451312 ZNF608Q9ULD9 1512 aaPredicted RBP33.96■■■■□ 3.03
NUCB1-206ENST00000451312 RIMBP3CA6NJZ7 1639 aa33.96■■■■□ 3.03
NUCB1-206ENST00000451312 RIMBP3BA6NNM3 1639 aa33.96■■■■□ 3.03
NUCB1-206ENST00000451312 RIMBP3Q9UFD9 1639 aa33.96■■■■□ 3.03
NUCB1-206ENST00000451312 IFT140Q96RY7 1462 aa33.89■■■■□ 3.02
NUCB1-206ENST00000451312 ARHGEF11O15085 1522 aa33.84■■■■□ 3.01
NUCB1-206ENST00000451312 CCDC88BA6NC98 1476 aa33.8■■■■□ 3
NUCB1-206ENST00000451312 PRDM2Q13029 1718 aa33.78■■■■□ 3
NUCB1-206ENST00000451312 TOPBP1Q92547 1522 aa33.78■■■■□ 3
NUCB1-206ENST00000451312 EIF4G3O43432 1585 aaKnown RBP33.65■■■□□ 2.98
NUCB1-206ENST00000451312 CYB5RLQ6IPT4 315 aa33.63■■■□□ 2.97
NUCB1-206ENST00000451312 ABCC8Q09428 1581 aa33.59■■■□□ 2.97
NUCB1-206ENST00000451312 AQRO60306 1485 aaKnown RBP eCLIP33.57■■■□□ 2.972e-6■□□□□ 9
NUCB1-206ENST00000451312 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
NUCB1-206ENST00000451312 TARBP1Q13395 1621 aaKnown RBP33.51■■■□□ 2.96
NUCB1-206ENST00000451312 ARAP1Q96P48 1450 aa33.5■■■□□ 2.95
NUCB1-206ENST00000451312 CHD1O14646 1710 aa33.44■■■□□ 2.94
NUCB1-206ENST00000451312 POLA1P09884 1462 aaPredicted RBP33.42■■■□□ 2.94
NUCB1-206ENST00000451312 FBLN2P98095 1184 aa33.39■■■□□ 2.94
NUCB1-206ENST00000451312 TRHP20396 242 aaPredicted RBP33.38■■■□□ 2.93
NUCB1-206ENST00000451312 RAD54L2Q9Y4B4 1467 aa33.32■■■□□ 2.92
NUCB1-206ENST00000451312 TDRD9Q8NDG6 1382 aaKnown RBP33.28■■■□□ 2.92
NUCB1-206ENST00000451312 SOGA1O94964 1423 aa33.23■■■□□ 2.91
NUCB1-206ENST00000451312 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
NUCB1-206ENST00000451312 CLASP1Q7Z460 1538 aa33.17■■■□□ 2.9
NUCB1-206ENST00000451312 FGD5Q6ZNL6 1462 aa33.11■■■□□ 2.89
NUCB1-206ENST00000451312 CHMP7Q8WUX9 453 aaPredicted RBP33.06■■■□□ 2.88
NUCB1-206ENST00000451312 WDR97A6NE52 1622 aa33.05■■■□□ 2.88
NUCB1-206ENST00000451312 MAGI1Q96QZ7 1491 aaPredicted RBP33.04■■■□□ 2.88
NUCB1-206ENST00000451312 CUX1P39880 1505 aa33.01■■■□□ 2.87
NUCB1-206ENST00000451312 SYNJ1O43426 1573 aa33■■■□□ 2.87
NUCB1-206ENST00000451312 GRIN2BQ13224 1484 aa32.99■■■□□ 2.87
NUCB1-206ENST00000451312 SYNJ2O15056 1496 aa32.95■■■□□ 2.87
NUCB1-206ENST00000451312 GAPVD1Q14C86 1478 aa32.84■■■□□ 2.85
NUCB1-206ENST00000451312 AEBP2Q6ZN18 517 aaPredicted RBP32.77■■■□□ 2.84
NUCB1-206ENST00000451312 PBRM1Q86U86 1689 aa32.72■■■□□ 2.83
NUCB1-206ENST00000451312 ABCA10Q8WWZ4 1543 aa32.71■■■□□ 2.83
NUCB1-206ENST00000451312 ABCA5Q8WWZ7 1642 aa32.67■■■□□ 2.82
NUCB1-206ENST00000451312 ERCC6L2Q5T890 1561 aa32.65■■■□□ 2.82
NUCB1-206ENST00000451312 GRIN2AQ12879 1464 aa32.58■■■□□ 2.81
NUCB1-206ENST00000451312 NUP160Q12769 1436 aa32.53■■■□□ 2.8
NUCB1-206ENST00000451312 CEP170Q5SW79 1584 aa32.49■■■□□ 2.79
NUCB1-206ENST00000451312 ADAMTS12P58397 1594 aa32.47■■■□□ 2.79
NUCB1-206ENST00000451312 WRNQ14191 1432 aaPredicted RBP eCLIP32.44■■■□□ 2.78
NUCB1-206ENST00000451312 SHROOM2Q13796 1616 aa32.39■■■□□ 2.78
NUCB1-206ENST00000451312 FHAD1B1AJZ9 1412 aa32.37■■■□□ 2.77
NUCB1-206ENST00000451312 TOP2BQ02880 1626 aa32.27■■■□□ 2.76
NUCB1-206ENST00000451312 BIVM-ERCC5R4GMW8 1640 aa32.25■■■□□ 2.75
NUCB1-206ENST00000451312 ERICH3Q5RHP9 1530 aa32.24■■■□□ 2.75
NUCB1-206ENST00000451312 PRG4Q92954 1404 aaPredicted RBP32.24■■■□□ 2.75
NUCB1-206ENST00000451312 SUPT5HO00267 1087 aaKnown RBP32.22■■■□□ 2.75
NUCB1-206ENST00000451312 KIF13AQ9H1H9 1805 aa32.19■■■□□ 2.74
NUCB1-206ENST00000451312 JPH4Q96JJ6 628 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms