RNA–Protein interactions for RNA: ENST00000451156.1

TRPS1-205, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 4

Gene TRPS1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-205ENST00000451156 NISCHQ9Y2I1 1504 aa53.13■■■■■ 6.1
TRPS1-205ENST00000451156 CCDC180Q9P1Z9 1646 aa47.27■■■■■ 5.16
TRPS1-205ENST00000451156 ABCC9O60706 1549 aa46.64■■■■■ 5.06
TRPS1-205ENST00000451156 RB1CC1Q8TDY2 1594 aa44.7■■■■■ 4.75
TRPS1-205ENST00000451156 NACADO15069 1562 aa44.6■■■■■ 4.73
TRPS1-205ENST00000451156 DCAF8L2P0C7V8 631 aa44.6■■■■■ 4.73
TRPS1-205ENST00000451156 MYO15BQ96JP2 1530 aa44.28■■■■■ 4.68
TRPS1-205ENST00000451156 ZCCHC6Q5VYS8 1495 aaKnown RBP44.15■■■■■ 4.66
TRPS1-205ENST00000451156 DCAF1Q9Y4B6 1507 aa43.95■■■■■ 4.63
TRPS1-205ENST00000451156 PABPN1Q86U42 306 aaKnown RBP eCLIP43.61■■■■■ 4.57
TRPS1-205ENST00000451156 UNC13AQ9UPW8 1703 aa43.58■■■■■ 4.57
TRPS1-205ENST00000451156 BICRAQ9NZM4 1560 aa43.37■■■■■ 4.53
TRPS1-205ENST00000451156 DNAJC5BQ9UF47 199 aa43.23■■■■■ 4.51
TRPS1-205ENST00000451156 SCRIBQ14160 1630 aa43.09■■■■■ 4.49
TRPS1-205ENST00000451156 SHROOM4Q9ULL8 1493 aa42.91■■■■■ 4.46
TRPS1-205ENST00000451156 EIF4G1Q04637 1599 aaKnown RBP42.24■■■■■ 4.35
TRPS1-205ENST00000451156 CC2D2AQ9P2K1 1620 aa42.14■■■■■ 4.34
TRPS1-205ENST00000451156 CECR2Q9BXF3 1484 aa41.97■■■■■ 4.31
TRPS1-205ENST00000451156 NCAPD3P42695 1498 aa41.23■■■■■ 4.19
TRPS1-205ENST00000451156 SMARCA4P51532 1647 aa41.22■■■■■ 4.19
TRPS1-205ENST00000451156 ATAD2BQ9ULI0 1458 aa41.17■■■■■ 4.18
TRPS1-205ENST00000451156 BAZ1AQ9NRL2 1556 aaPredicted RBP41.16■■■■■ 4.18
TRPS1-205ENST00000451156 SMARCA2P51531 1590 aa41.06■■■■■ 4.16
TRPS1-205ENST00000451156 MROH2BQ7Z745 1585 aa40.92■■■■■ 4.14
TRPS1-205ENST00000451156 HMGXB3Q12766 1538 aa40.9■■■■■ 4.14
TRPS1-205ENST00000451156 PEG3Q9GZU2 1588 aa40.87■■■■■ 4.13
TRPS1-205ENST00000451156 BAZ1BQ9UIG0 1483 aaKnown RBP40.77■■■■■ 4.12
TRPS1-205ENST00000451156 WIZO95785 1651 aa40.4■■■■■ 4.06
TRPS1-205ENST00000451156 RSF1Q96T23 1441 aaPredicted RBP40.39■■■■■ 4.06
TRPS1-205ENST00000451156 NESP48681 1621 aa40.27■■■■■ 4.04
TRPS1-205ENST00000451156 ERCC6Q03468 1493 aa40.21■■■■■ 4.03
TRPS1-205ENST00000451156 LAMC3Q9Y6N6 1575 aa40.1■■■■■ 4.01
TRPS1-205ENST00000451156 CADPSQ9ULU8 1353 aa40.02■■■■■ 4
TRPS1-205ENST00000451156 TOP2AP11388 1531 aaKnown RBP39.98■■■■□ 3.99
TRPS1-205ENST00000451156 CUX2O14529 1486 aa39.93■■■■□ 3.98
TRPS1-205ENST00000451156 PDS5BQ9NTI5 1447 aa39.92■■■■□ 3.98
TRPS1-205ENST00000451156 CFTRP13569 1480 aa39.68■■■■□ 3.94
TRPS1-205ENST00000451156 KIF21AQ7Z4S6 1674 aa39.67■■■■□ 3.94
TRPS1-205ENST00000451156 THOC2Q8NI27 1593 aaKnown RBP39.65■■■■□ 3.94
TRPS1-205ENST00000451156 CCDC88BA6NC98 1476 aa39.58■■■■□ 3.93
TRPS1-205ENST00000451156 FANCD2Q9BXW9 1451 aa39.49■■■■□ 3.91
TRPS1-205ENST00000451156 MRC2Q9UBG0 1479 aa39.47■■■■□ 3.91
TRPS1-205ENST00000451156 CEP164Q9UPV0 1460 aa39.45■■■■□ 3.91
TRPS1-205ENST00000451156 WDR62O43379 1518 aa39.33■■■■□ 3.89
TRPS1-205ENST00000451156 DNAJC5Q9H3Z4 198 aa39.22■■■■□ 3.87
TRPS1-205ENST00000451156 PRDM2Q13029 1718 aa39.16■■■■□ 3.86
TRPS1-205ENST00000451156 SUPT5HO00267 1087 aaKnown RBP39.14■■■■□ 3.86
TRPS1-205ENST00000451156 URB2Q14146 1524 aaKnown RBP39.11■■■■□ 3.85
TRPS1-205ENST00000451156 ABCC8Q09428 1581 aa38.84■■■■□ 3.81
TRPS1-205ENST00000451156 TOPBP1Q92547 1522 aa38.82■■■■□ 3.8
TRPS1-205ENST00000451156 DNMBPQ6XZF7 1577 aa38.71■■■■□ 3.79
TRPS1-205ENST00000451156 IFT140Q96RY7 1462 aa38.67■■■■□ 3.78
TRPS1-205ENST00000451156 ZNF608Q9ULD9 1512 aaPredicted RBP38.52■■■■□ 3.76
TRPS1-205ENST00000451156 POLA1P09884 1462 aaPredicted RBP38.47■■■■□ 3.75
TRPS1-205ENST00000451156 CUX1P39880 1505 aa38.39■■■■□ 3.74
TRPS1-205ENST00000451156 TARBP1Q13395 1621 aaKnown RBP38.39■■■■□ 3.74
TRPS1-205ENST00000451156 SOGA1O94964 1423 aa38.37■■■■□ 3.73
TRPS1-205ENST00000451156 OSCARQ8IYS5 282 aa38.34■■■■□ 3.73
TRPS1-205ENST00000451156 RAD54L2Q9Y4B4 1467 aa38.32■■■■□ 3.72
TRPS1-205ENST00000451156 FGD5Q6ZNL6 1462 aa38.31■■■■□ 3.72
TRPS1-205ENST00000451156 AQRO60306 1485 aaKnown RBP eCLIP38.29■■■■□ 3.72
TRPS1-205ENST00000451156 EIF4G3O43432 1585 aaKnown RBP38.26■■■■□ 3.72
TRPS1-205ENST00000451156 TDRD9Q8NDG6 1382 aaKnown RBP38.19■■■■□ 3.7
TRPS1-205ENST00000451156 WRNQ14191 1432 aaPredicted RBP eCLIP38.06■■■■□ 3.68
TRPS1-205ENST00000451156 WDR97A6NE52 1622 aa38.06■■■■□ 3.68
TRPS1-205ENST00000451156 TOP2BQ02880 1626 aa37.96■■■■□ 3.67
TRPS1-205ENST00000451156 ABCA10Q8WWZ4 1543 aa37.96■■■■□ 3.67
TRPS1-205ENST00000451156 GRIN2BQ13224 1484 aa37.92■■■■□ 3.66
TRPS1-205ENST00000451156 BIVM-ERCC5R4GMW8 1640 aa37.92■■■■□ 3.66
TRPS1-205ENST00000451156 FBLN2P98095 1184 aa37.92■■■■□ 3.66
TRPS1-205ENST00000451156 SYNJ1O43426 1573 aa37.91■■■■□ 3.66
TRPS1-205ENST00000451156 GAPVD1Q14C86 1478 aa37.88■■■■□ 3.65
TRPS1-205ENST00000451156 SNAPC4Q5SXM2 1469 aa37.86■■■■□ 3.65
TRPS1-205ENST00000451156 MAGI1Q96QZ7 1491 aaPredicted RBP37.84■■■■□ 3.65
TRPS1-205ENST00000451156 CHD1O14646 1710 aa37.81■■■■□ 3.64
TRPS1-205ENST00000451156 CHMP7Q8WUX9 453 aaPredicted RBP37.79■■■■□ 3.64
TRPS1-205ENST00000451156 ABCA5Q8WWZ7 1642 aa37.76■■■■□ 3.63
TRPS1-205ENST00000451156 SYNJ2O15056 1496 aa37.71■■■■□ 3.63
TRPS1-205ENST00000451156 TRIM41Q8WV44 630 aa37.7■■■■□ 3.63
TRPS1-205ENST00000451156 PBRM1Q86U86 1689 aa37.67■■■■□ 3.62
TRPS1-205ENST00000451156 RIMBP3CA6NJZ7 1639 aa37.58■■■■□ 3.61
TRPS1-205ENST00000451156 RIMBP3BA6NNM3 1639 aa37.58■■■■□ 3.61
TRPS1-205ENST00000451156 RIMBP3Q9UFD9 1639 aa37.58■■■■□ 3.61
TRPS1-205ENST00000451156 ARHGEF11O15085 1522 aa37.58■■■■□ 3.61
TRPS1-205ENST00000451156 ERICH3Q5RHP9 1530 aa37.48■■■■□ 3.59
TRPS1-205ENST00000451156 CLASP1Q7Z460 1538 aa37.47■■■■□ 3.59
TRPS1-205ENST00000451156 FHAD1B1AJZ9 1412 aa37.44■■■■□ 3.58
TRPS1-205ENST00000451156 ADAMTS12P58397 1594 aa37.41■■■■□ 3.58
TRPS1-205ENST00000451156 GRIN2AQ12879 1464 aa37.4■■■■□ 3.58
TRPS1-205ENST00000451156 CYB5RLQ6IPT4 315 aa37.37■■■■□ 3.57
TRPS1-205ENST00000451156 KIF27Q86VH2 1401 aa37.31■■■■□ 3.56
TRPS1-205ENST00000451156 NUP160Q12769 1436 aa37.28■■■■□ 3.56
TRPS1-205ENST00000451156 IGF1RP08069 1367 aa37.27■■■■□ 3.56
TRPS1-205ENST00000451156 ARAP1Q96P48 1450 aa37.26■■■■□ 3.56
TRPS1-205ENST00000451156 CEP170Q5SW79 1584 aa37.19■■■■□ 3.54
TRPS1-205ENST00000451156 CUL7Q14999 1698 aa37.01■■■■□ 3.52
TRPS1-205ENST00000451156 CARMIL1Q5VZK9 1371 aa37.01■■■■□ 3.51
TRPS1-205ENST00000451156 JPH4Q96JJ6 628 aa36.99■■■■□ 3.51
TRPS1-205ENST00000451156 SHROOM2Q13796 1616 aa36.97■■■■□ 3.51
TRPS1-205ENST00000451156 ERCC6L2Q5T890 1561 aa36.93■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms