RNA–Protein interactions for RNA: ENST00000450981.5

SEC22C-210, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-210ENST00000450981 NISCHQ9Y2I1 1504 aa24.69■■□□□ 1.54
SEC22C-210ENST00000450981 ABCC9O60706 1549 aa22.31■■□□□ 1.16
SEC22C-210ENST00000450981 CCDC180Q9P1Z9 1646 aa22.13■■□□□ 1.13
SEC22C-210ENST00000450981 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
SEC22C-210ENST00000450981 DCAF8L2P0C7V8 631 aa21.06■□□□□ 0.96
SEC22C-210ENST00000450981 DNAJC5BQ9UF47 199 aa20.99■□□□□ 0.95
SEC22C-210ENST00000450981 NACADO15069 1562 aa20.93■□□□□ 0.94
SEC22C-210ENST00000450981 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
SEC22C-210ENST00000450981 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
SEC22C-210ENST00000450981 MYO15BQ96JP2 1530 aa20.53■□□□□ 0.88
SEC22C-210ENST00000450981 BICRAQ9NZM4 1560 aa20.53■□□□□ 0.88
SEC22C-210ENST00000450981 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
SEC22C-210ENST00000450981 SCRIBQ14160 1630 aa20.29■□□□□ 0.84
SEC22C-210ENST00000450981 DCAF1Q9Y4B6 1507 aa20.28■□□□□ 0.84
SEC22C-210ENST00000450981 CC2D2AQ9P2K1 1620 aa20.1■□□□□ 0.81
SEC22C-210ENST00000450981 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
SEC22C-210ENST00000450981 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
SEC22C-210ENST00000450981 EIF4G1Q04637 1599 aaKnown RBP20.01■□□□□ 0.79
SEC22C-210ENST00000450981 NCAPD3P42695 1498 aa19.32■□□□□ 0.68
SEC22C-210ENST00000450981 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
SEC22C-210ENST00000450981 SMARCA4P51532 1647 aa19.28■□□□□ 0.68
SEC22C-210ENST00000450981 ERCC6Q03468 1493 aa19.23■□□□□ 0.67
SEC22C-210ENST00000450981 DNAJC5Q9H3Z4 198 aa19.22■□□□□ 0.67
SEC22C-210ENST00000450981 SMARCA2P51531 1590 aa19.21■□□□□ 0.67
SEC22C-210ENST00000450981 NESP48681 1621 aa19.16■□□□□ 0.66
SEC22C-210ENST00000450981 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
SEC22C-210ENST00000450981 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
SEC22C-210ENST00000450981 BAZ1BQ9UIG0 1483 aaKnown RBP19.12■□□□□ 0.65
SEC22C-210ENST00000450981 CUX2O14529 1486 aa19.11■□□□□ 0.65
SEC22C-210ENST00000450981 MROH2BQ7Z745 1585 aa19.08■□□□□ 0.65
SEC22C-210ENST00000450981 PEG3Q9GZU2 1588 aa19■□□□□ 0.63
SEC22C-210ENST00000450981 LAMC3Q9Y6N6 1575 aa18.9■□□□□ 0.62
SEC22C-210ENST00000450981 KIF21AQ7Z4S6 1674 aa18.89■□□□□ 0.61
SEC22C-210ENST00000450981 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.61
SEC22C-210ENST00000450981 WIZO95785 1651 aa18.88■□□□□ 0.61
SEC22C-210ENST00000450981 PDS5BQ9NTI5 1447 aa18.81■□□□□ 0.6
SEC22C-210ENST00000450981 CADPSQ9ULU8 1353 aa18.77■□□□□ 0.6
SEC22C-210ENST00000450981 MRC2Q9UBG0 1479 aa18.66■□□□□ 0.58
SEC22C-210ENST00000450981 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
SEC22C-210ENST00000450981 WDR62O43379 1518 aa18.59■□□□□ 0.57
SEC22C-210ENST00000450981 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
SEC22C-210ENST00000450981 FANCD2Q9BXW9 1451 aa18.58■□□□□ 0.56
SEC22C-210ENST00000450981 TOP2AP11388 1531 aaKnown RBP18.55■□□□□ 0.56
SEC22C-210ENST00000450981 CFTRP13569 1480 aa18.52■□□□□ 0.55
SEC22C-210ENST00000450981 TRIM41Q8WV44 630 aa18.5■□□□□ 0.55
SEC22C-210ENST00000450981 URB2Q14146 1524 aaKnown RBP18.44■□□□□ 0.54
SEC22C-210ENST00000450981 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.53
SEC22C-210ENST00000450981 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
SEC22C-210ENST00000450981 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
SEC22C-210ENST00000450981 ZNF608Q9ULD9 1512 aaPredicted RBP18.25■□□□□ 0.51
SEC22C-210ENST00000450981 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
SEC22C-210ENST00000450981 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
SEC22C-210ENST00000450981 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
SEC22C-210ENST00000450981 EIF4G3O43432 1585 aaKnown RBP18.11■□□□□ 0.49
SEC22C-210ENST00000450981 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
SEC22C-210ENST00000450981 RIMBP3CA6NJZ7 1639 aa18.1■□□□□ 0.49
SEC22C-210ENST00000450981 RIMBP3BA6NNM3 1639 aa18.1■□□□□ 0.49
SEC22C-210ENST00000450981 RIMBP3Q9UFD9 1639 aa18.1■□□□□ 0.49
SEC22C-210ENST00000450981 AQRO60306 1485 aaKnown RBP eCLIP18.09■□□□□ 0.49
SEC22C-210ENST00000450981 FBLN2P98095 1184 aa18.05■□□□□ 0.48
SEC22C-210ENST00000450981 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
SEC22C-210ENST00000450981 CHD1O14646 1710 aa18.03■□□□□ 0.48
SEC22C-210ENST00000450981 POLA1P09884 1462 aaPredicted RBP18.03■□□□□ 0.48
SEC22C-210ENST00000450981 RAD54L2Q9Y4B4 1467 aa18.03■□□□□ 0.48
SEC22C-210ENST00000450981 ARHGEF11O15085 1522 aa18■□□□□ 0.47
SEC22C-210ENST00000450981 TDRD9Q8NDG6 1382 aaKnown RBP17.98■□□□□ 0.47
SEC22C-210ENST00000450981 SOGA1O94964 1423 aa17.98■□□□□ 0.47
SEC22C-210ENST00000450981 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
SEC22C-210ENST00000450981 SUPT5HO00267 1087 aaKnown RBP17.94■□□□□ 0.46
SEC22C-210ENST00000450981 FGD5Q6ZNL6 1462 aa17.94■□□□□ 0.46
SEC22C-210ENST00000450981 CUX1P39880 1505 aa17.91■□□□□ 0.46
SEC22C-210ENST00000450981 SNAPC4Q5SXM2 1469 aa17.88■□□□□ 0.45
SEC22C-210ENST00000450981 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
SEC22C-210ENST00000450981 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
SEC22C-210ENST00000450981 TRHP20396 242 aaPredicted RBP17.81■□□□□ 0.44
SEC22C-210ENST00000450981 GRIN2BQ13224 1484 aa17.78■□□□□ 0.44
SEC22C-210ENST00000450981 WDR97A6NE52 1622 aa17.77■□□□□ 0.44
SEC22C-210ENST00000450981 PBRM1Q86U86 1689 aa17.76■□□□□ 0.43
SEC22C-210ENST00000450981 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
SEC22C-210ENST00000450981 SYNJ1O43426 1573 aa17.74■□□□□ 0.43
SEC22C-210ENST00000450981 CLASP1Q7Z460 1538 aa17.74■□□□□ 0.43
SEC22C-210ENST00000450981 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
SEC22C-210ENST00000450981 SYNJ2O15056 1496 aa17.71■□□□□ 0.43
SEC22C-210ENST00000450981 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
SEC22C-210ENST00000450981 ABCA5Q8WWZ7 1642 aa17.67■□□□□ 0.42
SEC22C-210ENST00000450981 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
SEC22C-210ENST00000450981 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.41
SEC22C-210ENST00000450981 TOP2BQ02880 1626 aa17.58■□□□□ 0.4
SEC22C-210ENST00000450981 ERCC6L2Q5T890 1561 aa17.57■□□□□ 0.4
SEC22C-210ENST00000450981 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
SEC22C-210ENST00000450981 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
SEC22C-210ENST00000450981 CEP170Q5SW79 1584 aa17.53■□□□□ 0.4
SEC22C-210ENST00000450981 FHAD1B1AJZ9 1412 aa17.49■□□□□ 0.39
SEC22C-210ENST00000450981 NUP160Q12769 1436 aa17.47■□□□□ 0.39
SEC22C-210ENST00000450981 ERICH3Q5RHP9 1530 aa17.43■□□□□ 0.38
SEC22C-210ENST00000450981 SHROOM2Q13796 1616 aa17.4■□□□□ 0.38
SEC22C-210ENST00000450981 PRG4Q92954 1404 aaPredicted RBP17.38■□□□□ 0.37
SEC22C-210ENST00000450981 JPH4Q96JJ6 628 aa17.37■□□□□ 0.37
SEC22C-210ENST00000450981 RUSC2Q8N2Y8 1516 aa17.3■□□□□ 0.36
SEC22C-210ENST00000450981 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms