RNA–Protein interactions for RNA: ENST00000450898.1

SATB1-207, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 464 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-207ENST00000450898 NISCHQ9Y2I1 1504 aa68.11■■■■■ 8.49
SATB1-207ENST00000450898 CCDC180Q9P1Z9 1646 aa61■■■■■ 7.36
SATB1-207ENST00000450898 ABCC9O60706 1549 aa60.89■■■■■ 7.34
SATB1-207ENST00000450898 RB1CC1Q8TDY2 1594 aa57.99■■■■■ 6.87
SATB1-207ENST00000450898 NACADO15069 1562 aa57.65■■■■■ 6.82
SATB1-207ENST00000450898 DCAF8L2P0C7V8 631 aa57.45■■■■■ 6.79
SATB1-207ENST00000450898 DNAJC5BQ9UF47 199 aa57.04■■■■■ 6.72
SATB1-207ENST00000450898 MYO15BQ96JP2 1530 aa56.91■■■■■ 6.7
SATB1-207ENST00000450898 PABPN1Q86U42 306 aaKnown RBP eCLIP56.76■■■■■ 6.68
SATB1-207ENST00000450898 UNC13AQ9UPW8 1703 aa56.74■■■■■ 6.67
SATB1-207ENST00000450898 ZCCHC6Q5VYS8 1495 aaKnown RBP56.47■■■■■ 6.63
SATB1-207ENST00000450898 BICRAQ9NZM4 1560 aa56.35■■■■■ 6.61
SATB1-207ENST00000450898 DCAF1Q9Y4B6 1507 aa56.25■■■■■ 6.6
SATB1-207ENST00000450898 SCRIBQ14160 1630 aa55.63■■■■■ 6.5
SATB1-207ENST00000450898 SHROOM4Q9ULL8 1493 aa55.54■■■■■ 6.48
SATB1-207ENST00000450898 CC2D2AQ9P2K1 1620 aa55.01■■■■■ 6.4
SATB1-207ENST00000450898 EIF4G1Q04637 1599 aaKnown RBP54.93■■■■■ 6.38
SATB1-207ENST00000450898 CECR2Q9BXF3 1484 aa54.82■■■■■ 6.37
SATB1-207ENST00000450898 NCAPD3P42695 1498 aa53.24■■■■■ 6.11
SATB1-207ENST00000450898 ATAD2BQ9ULI0 1458 aa53.11■■■■■ 6.09
SATB1-207ENST00000450898 SMARCA4P51532 1647 aa53.09■■■■■ 6.09
SATB1-207ENST00000450898 SMARCA2P51531 1590 aa52.94■■■■■ 6.07
SATB1-207ENST00000450898 BAZ1AQ9NRL2 1556 aaPredicted RBP52.84■■■■■ 6.05
SATB1-207ENST00000450898 HMGXB3Q12766 1538 aa52.83■■■■■ 6.05
SATB1-207ENST00000450898 BAZ1BQ9UIG0 1483 aaKnown RBP52.58■■■■■ 6.01
SATB1-207ENST00000450898 PEG3Q9GZU2 1588 aa52.56■■■■■ 6
SATB1-207ENST00000450898 ERCC6Q03468 1493 aa52.53■■■■■ 6
SATB1-207ENST00000450898 MROH2BQ7Z745 1585 aa52.51■■■■■ 6
SATB1-207ENST00000450898 CUX2O14529 1486 aa52.37■■■■■ 5.97
SATB1-207ENST00000450898 NESP48681 1621 aa52.37■■■■■ 5.97
SATB1-207ENST00000450898 DNAJC5Q9H3Z4 198 aa52.21■■■■■ 5.95
SATB1-207ENST00000450898 LAMC3Q9Y6N6 1575 aa52■■■■■ 5.91
SATB1-207ENST00000450898 WIZO95785 1651 aa51.88■■■■■ 5.89
SATB1-207ENST00000450898 THOC2Q8NI27 1593 aaKnown RBP51.77■■■■■ 5.88
SATB1-207ENST00000450898 PDS5BQ9NTI5 1447 aa51.7■■■■■ 5.87
SATB1-207ENST00000450898 KIF21AQ7Z4S6 1674 aa51.68■■■■■ 5.86
SATB1-207ENST00000450898 CADPSQ9ULU8 1353 aa51.64■■■■■ 5.86
SATB1-207ENST00000450898 RSF1Q96T23 1441 aaPredicted RBP51.47■■■■■ 5.83
SATB1-207ENST00000450898 MRC2Q9UBG0 1479 aa51.23■■■■■ 5.79
SATB1-207ENST00000450898 TOP2AP11388 1531 aaKnown RBP51.2■■■■■ 5.79
SATB1-207ENST00000450898 WDR62O43379 1518 aa51.11■■■■■ 5.77
SATB1-207ENST00000450898 CFTRP13569 1480 aa51.08■■■■■ 5.77
SATB1-207ENST00000450898 CEP164Q9UPV0 1460 aa51.07■■■■■ 5.77
SATB1-207ENST00000450898 FANCD2Q9BXW9 1451 aa51.04■■■■■ 5.76
SATB1-207ENST00000450898 CCDC88BA6NC98 1476 aa50.66■■■■■ 5.7
SATB1-207ENST00000450898 URB2Q14146 1524 aaKnown RBP50.62■■■■■ 5.69
SATB1-207ENST00000450898 PRDM2Q13029 1718 aa50.56■■■■■ 5.68
SATB1-207ENST00000450898 TOPBP1Q92547 1522 aa50.11■■■■■ 5.61
SATB1-207ENST00000450898 OSCARQ8IYS5 282 aa50.06■■■■■ 5.6
SATB1-207ENST00000450898 IFT140Q96RY7 1462 aa50.05■■■■■ 5.6
SATB1-207ENST00000450898 ZNF608Q9ULD9 1512 aaPredicted RBP49.99■■■■■ 5.59
SATB1-207ENST00000450898 ABCC8Q09428 1581 aa49.98■■■■■ 5.59
SATB1-207ENST00000450898 TRIM41Q8WV44 630 aa49.98■■■■■ 5.59
SATB1-207ENST00000450898 DNMBPQ6XZF7 1577 aa49.92■■■■■ 5.58
SATB1-207ENST00000450898 EIF4G3O43432 1585 aaKnown RBP49.68■■■■■ 5.54
SATB1-207ENST00000450898 TARBP1Q13395 1621 aaKnown RBP49.65■■■■■ 5.54
SATB1-207ENST00000450898 POLA1P09884 1462 aaPredicted RBP49.6■■■■■ 5.53
SATB1-207ENST00000450898 AQRO60306 1485 aaKnown RBP eCLIP49.56■■■■■ 5.52
SATB1-207ENST00000450898 RAD54L2Q9Y4B4 1467 aa49.44■■■■■ 5.5
SATB1-207ENST00000450898 SOGA1O94964 1423 aa49.39■■■■■ 5.5
SATB1-207ENST00000450898 RIMBP3CA6NJZ7 1639 aa49.37■■■■■ 5.49
SATB1-207ENST00000450898 RIMBP3BA6NNM3 1639 aa49.37■■■■■ 5.49
SATB1-207ENST00000450898 RIMBP3Q9UFD9 1639 aa49.37■■■■■ 5.49
SATB1-207ENST00000450898 SUPT5HO00267 1087 aaKnown RBP49.34■■■■■ 5.49
SATB1-207ENST00000450898 FGD5Q6ZNL6 1462 aa49.31■■■■■ 5.48
SATB1-207ENST00000450898 CUX1P39880 1505 aa49.31■■■■■ 5.48
SATB1-207ENST00000450898 CHD1O14646 1710 aa49.29■■■■■ 5.48
SATB1-207ENST00000450898 TDRD9Q8NDG6 1382 aaKnown RBP49.28■■■■■ 5.48
SATB1-207ENST00000450898 ARHGEF11O15085 1522 aa49.23■■■■■ 5.47
SATB1-207ENST00000450898 FBLN2P98095 1184 aa49.19■■■■■ 5.47
SATB1-207ENST00000450898 WDR97A6NE52 1622 aa49.1■■■■■ 5.45
SATB1-207ENST00000450898 SNAPC4Q5SXM2 1469 aa49.04■■■■■ 5.44
SATB1-207ENST00000450898 GRIN2BQ13224 1484 aa48.92■■■■■ 5.42
SATB1-207ENST00000450898 MAGI1Q96QZ7 1491 aaPredicted RBP48.9■■■■■ 5.42
SATB1-207ENST00000450898 CYB5RLQ6IPT4 315 aa48.89■■■■■ 5.42
SATB1-207ENST00000450898 CHMP7Q8WUX9 453 aaPredicted RBP48.85■■■■■ 5.41
SATB1-207ENST00000450898 GAPVD1Q14C86 1478 aa48.79■■■■■ 5.4
SATB1-207ENST00000450898 ARAP1Q96P48 1450 aa48.77■■■■■ 5.4
SATB1-207ENST00000450898 ABCA10Q8WWZ4 1543 aa48.76■■■■■ 5.4
SATB1-207ENST00000450898 SYNJ2O15056 1496 aa48.74■■■■■ 5.39
SATB1-207ENST00000450898 CLASP1Q7Z460 1538 aa48.73■■■■■ 5.39
SATB1-207ENST00000450898 PBRM1Q86U86 1689 aa48.73■■■■■ 5.39
SATB1-207ENST00000450898 SYNJ1O43426 1573 aa48.69■■■■■ 5.39
SATB1-207ENST00000450898 ABCA5Q8WWZ7 1642 aa48.67■■■■■ 5.38
SATB1-207ENST00000450898 WRNQ14191 1432 aaPredicted RBP eCLIP48.59■■■■■ 5.37
SATB1-207ENST00000450898 TOP2BQ02880 1626 aa48.55■■■■■ 5.36
SATB1-207ENST00000450898 BIVM-ERCC5R4GMW8 1640 aa48.54■■■■■ 5.36
SATB1-207ENST00000450898 GRIN2AQ12879 1464 aa48.29■■■■■ 5.32
SATB1-207ENST00000450898 ADAMTS12P58397 1594 aa48.28■■■■■ 5.32
SATB1-207ENST00000450898 TRHP20396 242 aaPredicted RBP48.27■■■■■ 5.32
SATB1-207ENST00000450898 FHAD1B1AJZ9 1412 aa48.16■■■■■ 5.3
SATB1-207ENST00000450898 ERICH3Q5RHP9 1530 aa48.14■■■■■ 5.3
SATB1-207ENST00000450898 NUP160Q12769 1436 aa48.14■■■■■ 5.3
SATB1-207ENST00000450898 CEP170Q5SW79 1584 aa48.13■■■■■ 5.29
SATB1-207ENST00000450898 ERCC6L2Q5T890 1561 aa48.02■■■■■ 5.28
SATB1-207ENST00000450898 SHROOM2Q13796 1616 aa47.89■■■■■ 5.26
SATB1-207ENST00000450898 JPH4Q96JJ6 628 aa47.67■■■■■ 5.22
SATB1-207ENST00000450898 PRG4Q92954 1404 aaPredicted RBP47.66■■■■■ 5.22
SATB1-207ENST00000450898 IGF1RP08069 1367 aa47.62■■■■■ 5.21
SATB1-207ENST00000450898 KIF27Q86VH2 1401 aa47.61■■■■■ 5.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms