RNA–Protein interactions for RNA: ENST00000450875.5

CITED1-208, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

TSL 2

Gene CITED1, Length 505 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-208ENST00000450875 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
CITED1-208ENST00000450875 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
CITED1-208ENST00000450875 ABCC9O60706 1549 aa16.87■□□□□ 0.29
CITED1-208ENST00000450875 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
CITED1-208ENST00000450875 RB1CC1Q8TDY2 1594 aa16.23■□□□□ 0.19
CITED1-208ENST00000450875 NACADO15069 1562 aa16.21■□□□□ 0.18
CITED1-208ENST00000450875 ZCCHC6Q5VYS8 1495 aaKnown RBP16.15■□□□□ 0.18
CITED1-208ENST00000450875 MYO15BQ96JP2 1530 aa16.08■□□□□ 0.16
CITED1-208ENST00000450875 DCAF1Q9Y4B6 1507 aa16.03■□□□□ 0.16
CITED1-208ENST00000450875 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
CITED1-208ENST00000450875 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.12
CITED1-208ENST00000450875 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
CITED1-208ENST00000450875 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
CITED1-208ENST00000450875 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
CITED1-208ENST00000450875 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
CITED1-208ENST00000450875 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
CITED1-208ENST00000450875 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
CITED1-208ENST00000450875 EIF4G1Q04637 1599 aaKnown RBP15.3■□□□□ 0.04
CITED1-208ENST00000450875 CC2D2AQ9P2K1 1620 aa15.23■□□□□ 0.03
CITED1-208ENST00000450875 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
CITED1-208ENST00000450875 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
CITED1-208ENST00000450875 SMARCA4P51532 1647 aa15.04■□□□□ -0
CITED1-208ENST00000450875 SMARCA2P51531 1590 aa14.96□□□□□ -0.01
CITED1-208ENST00000450875 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
CITED1-208ENST00000450875 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
CITED1-208ENST00000450875 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
CITED1-208ENST00000450875 BAZ1BQ9UIG0 1483 aaKnown RBP14.88□□□□□ -0.03
CITED1-208ENST00000450875 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
CITED1-208ENST00000450875 PEG3Q9GZU2 1588 aa14.86□□□□□ -0.03
CITED1-208ENST00000450875 RSF1Q96T23 1441 aaPredicted RBP14.8□□□□□ -0.04
CITED1-208ENST00000450875 WIZO95785 1651 aa14.8□□□□□ -0.04
CITED1-208ENST00000450875 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
CITED1-208ENST00000450875 ERCC6Q03468 1493 aa14.59□□□□□ -0.07
CITED1-208ENST00000450875 NESP48681 1621 aa14.58□□□□□ -0.08
CITED1-208ENST00000450875 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
CITED1-208ENST00000450875 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
CITED1-208ENST00000450875 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
CITED1-208ENST00000450875 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
CITED1-208ENST00000450875 CCDC88BA6NC98 1476 aa14.48□□□□□ -0.09
CITED1-208ENST00000450875 CFTRP13569 1480 aa14.44□□□□□ -0.1
CITED1-208ENST00000450875 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
CITED1-208ENST00000450875 FANCD2Q9BXW9 1451 aa14.38□□□□□ -0.11
CITED1-208ENST00000450875 CEP164Q9UPV0 1460 aa14.37□□□□□ -0.11
CITED1-208ENST00000450875 CUX2O14529 1486 aa14.36□□□□□ -0.11
CITED1-208ENST00000450875 MRC2Q9UBG0 1479 aa14.32□□□□□ -0.12
CITED1-208ENST00000450875 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
CITED1-208ENST00000450875 PRDM2Q13029 1718 aa14.31□□□□□ -0.12
CITED1-208ENST00000450875 WDR62O43379 1518 aa14.24□□□□□ -0.13
CITED1-208ENST00000450875 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
CITED1-208ENST00000450875 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
CITED1-208ENST00000450875 TOPBP1Q92547 1522 aa14.13□□□□□ -0.15
CITED1-208ENST00000450875 DNMBPQ6XZF7 1577 aa14.12□□□□□ -0.15
CITED1-208ENST00000450875 IFT140Q96RY7 1462 aa14.05□□□□□ -0.16
CITED1-208ENST00000450875 CUX1P39880 1505 aa14.02□□□□□ -0.16
CITED1-208ENST00000450875 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
CITED1-208ENST00000450875 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
CITED1-208ENST00000450875 SOGA1O94964 1423 aa13.99□□□□□ -0.17
CITED1-208ENST00000450875 WRNQ14191 1432 aaPredicted RBP eCLIP13.98□□□□□ -0.17
CITED1-208ENST00000450875 PHF23Q9BUL5 403 aaPredicted RBP13.98□□□□□ -0.17
CITED1-208ENST00000450875 ZNF608Q9ULD9 1512 aaPredicted RBP13.96□□□□□ -0.17
CITED1-208ENST00000450875 RAD54L2Q9Y4B4 1467 aa13.96□□□□□ -0.17
CITED1-208ENST00000450875 TARBP1Q13395 1621 aaKnown RBP13.94□□□□□ -0.18
CITED1-208ENST00000450875 TOP2BQ02880 1626 aa13.91□□□□□ -0.18
CITED1-208ENST00000450875 TDRD9Q8NDG6 1382 aaKnown RBP13.91□□□□□ -0.18
CITED1-208ENST00000450875 AQRO60306 1485 aaKnown RBP eCLIP13.91□□□□□ -0.18
CITED1-208ENST00000450875 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
CITED1-208ENST00000450875 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
CITED1-208ENST00000450875 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
CITED1-208ENST00000450875 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
CITED1-208ENST00000450875 WDR97A6NE52 1622 aa13.86□□□□□ -0.19
CITED1-208ENST00000450875 FBLN2P98095 1184 aa13.84□□□□□ -0.19
CITED1-208ENST00000450875 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
CITED1-208ENST00000450875 ABCA10Q8WWZ4 1543 aa13.84□□□□□ -0.19
CITED1-208ENST00000450875 GAPVD1Q14C86 1478 aa13.82□□□□□ -0.2
CITED1-208ENST00000450875 GRIN2BQ13224 1484 aa13.81□□□□□ -0.2
CITED1-208ENST00000450875 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
CITED1-208ENST00000450875 SNAPC4Q5SXM2 1469 aa13.78□□□□□ -0.2
CITED1-208ENST00000450875 PBRM1Q86U86 1689 aa13.76□□□□□ -0.21
CITED1-208ENST00000450875 ABCA5Q8WWZ7 1642 aa13.76□□□□□ -0.21
CITED1-208ENST00000450875 MAGI1Q96QZ7 1491 aaPredicted RBP13.76□□□□□ -0.21
CITED1-208ENST00000450875 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
CITED1-208ENST00000450875 CHD1O14646 1710 aa13.73□□□□□ -0.21
CITED1-208ENST00000450875 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
CITED1-208ENST00000450875 SYNJ2O15056 1496 aa13.71□□□□□ -0.21
CITED1-208ENST00000450875 ERICH3Q5RHP9 1530 aa13.69□□□□□ -0.22
CITED1-208ENST00000450875 FHAD1B1AJZ9 1412 aa13.66□□□□□ -0.22
CITED1-208ENST00000450875 ADAMTS12P58397 1594 aa13.64□□□□□ -0.23
CITED1-208ENST00000450875 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
CITED1-208ENST00000450875 IGF1RP08069 1367 aa13.61□□□□□ -0.23
CITED1-208ENST00000450875 CUL7Q14999 1698 aa13.58□□□□□ -0.24
CITED1-208ENST00000450875 CARMIL1Q5VZK9 1371 aa13.57□□□□□ -0.24
CITED1-208ENST00000450875 CLASP1Q7Z460 1538 aa13.55□□□□□ -0.24
CITED1-208ENST00000450875 ARHGEF11O15085 1522 aa13.54□□□□□ -0.24
CITED1-208ENST00000450875 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
CITED1-208ENST00000450875 NUP160Q12769 1436 aa13.54□□□□□ -0.24
CITED1-208ENST00000450875 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
CITED1-208ENST00000450875 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
CITED1-208ENST00000450875 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
CITED1-208ENST00000450875 CEP170Q5SW79 1584 aa13.53□□□□□ -0.24
CITED1-208ENST00000450875 CYB5RLQ6IPT4 315 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms