RNA–Protein interactions for RNA: ENST00000450844.1

GPATCH3-203, Transcript of G-patch domain containing 3, humanhuman

TSL 2

Gene GPATCH3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-203ENST00000450844 NISCHQ9Y2I1 1504 aa43.56■■■■■ 4.56
GPATCH3-203ENST00000450844 CCDC180Q9P1Z9 1646 aa39.15■■■■□ 3.86
GPATCH3-203ENST00000450844 ABCC9O60706 1549 aa39.11■■■■□ 3.85
GPATCH3-203ENST00000450844 RB1CC1Q8TDY2 1594 aa37.21■■■■□ 3.55
GPATCH3-203ENST00000450844 NACADO15069 1562 aa36.95■■■■□ 3.51
GPATCH3-203ENST00000450844 DNAJC5BQ9UF47 199 aa36.73■■■■□ 3.47
GPATCH3-203ENST00000450844 DCAF8L2P0C7V8 631 aa36.56■■■■□ 3.44
GPATCH3-203ENST00000450844 UNC13AQ9UPW8 1703 aa36.53■■■■□ 3.44
GPATCH3-203ENST00000450844 MYO15BQ96JP2 1530 aa36.44■■■■□ 3.42
GPATCH3-203ENST00000450844 PABPN1Q86U42 306 aaKnown RBP eCLIP36.35■■■■□ 3.41
GPATCH3-203ENST00000450844 BICRAQ9NZM4 1560 aa36.24■■■■□ 3.39
GPATCH3-203ENST00000450844 ZCCHC6Q5VYS8 1495 aaKnown RBP36.13■■■■□ 3.37
GPATCH3-203ENST00000450844 DCAF1Q9Y4B6 1507 aa35.98■■■■□ 3.35
GPATCH3-203ENST00000450844 SCRIBQ14160 1630 aa35.65■■■■□ 3.3
GPATCH3-203ENST00000450844 SHROOM4Q9ULL8 1493 aa35.65■■■■□ 3.3
GPATCH3-203ENST00000450844 CC2D2AQ9P2K1 1620 aa35.38■■■■□ 3.25
GPATCH3-203ENST00000450844 EIF4G1Q04637 1599 aaKnown RBP35.3■■■■□ 3.24
GPATCH3-203ENST00000450844 CECR2Q9BXF3 1484 aa35.22■■■■□ 3.23
GPATCH3-203ENST00000450844 NCAPD3P42695 1498 aa34.11■■■■□ 3.05
GPATCH3-203ENST00000450844 SMARCA4P51532 1647 aa34.02■■■■□ 3.04
GPATCH3-203ENST00000450844 ATAD2BQ9ULI0 1458 aa34.01■■■■□ 3.04
GPATCH3-203ENST00000450844 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
GPATCH3-203ENST00000450844 HMGXB3Q12766 1538 aa33.89■■■■□ 3.02
GPATCH3-203ENST00000450844 BAZ1AQ9NRL2 1556 aaPredicted RBP33.79■■■■□ 3
GPATCH3-203ENST00000450844 PEG3Q9GZU2 1588 aa33.7■■■□□ 2.99
GPATCH3-203ENST00000450844 CUX2O14529 1486 aa33.69■■■□□ 2.98
GPATCH3-203ENST00000450844 ERCC6Q03468 1493 aa33.69■■■□□ 2.98
GPATCH3-203ENST00000450844 DNAJC5Q9H3Z4 198 aa33.66■■■□□ 2.98
GPATCH3-203ENST00000450844 BAZ1BQ9UIG0 1483 aaKnown RBP33.65■■■□□ 2.98
GPATCH3-203ENST00000450844 NESP48681 1621 aa33.64■■■□□ 2.98
GPATCH3-203ENST00000450844 MROH2BQ7Z745 1585 aa33.6■■■□□ 2.97
GPATCH3-203ENST00000450844 THOC2Q8NI27 1593 aaKnown RBP33.36■■■□□ 2.93
GPATCH3-203ENST00000450844 LAMC3Q9Y6N6 1575 aa33.35■■■□□ 2.93
GPATCH3-203ENST00000450844 KIF21AQ7Z4S6 1674 aa33.26■■■□□ 2.91
GPATCH3-203ENST00000450844 WIZO95785 1651 aa33.2■■■□□ 2.91
GPATCH3-203ENST00000450844 PDS5BQ9NTI5 1447 aa33.08■■■□□ 2.89
GPATCH3-203ENST00000450844 CADPSQ9ULU8 1353 aa33.03■■■□□ 2.88
GPATCH3-203ENST00000450844 MRC2Q9UBG0 1479 aa32.87■■■□□ 2.85
GPATCH3-203ENST00000450844 WDR62O43379 1518 aa32.85■■■□□ 2.85
GPATCH3-203ENST00000450844 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
GPATCH3-203ENST00000450844 TOP2AP11388 1531 aaKnown RBP32.76■■■□□ 2.83
GPATCH3-203ENST00000450844 CEP164Q9UPV0 1460 aa32.72■■■□□ 2.83
GPATCH3-203ENST00000450844 CFTRP13569 1480 aa32.7■■■□□ 2.83
GPATCH3-203ENST00000450844 FANCD2Q9BXW9 1451 aa32.69■■■□□ 2.82
GPATCH3-203ENST00000450844 URB2Q14146 1524 aaKnown RBP32.49■■■□□ 2.79
GPATCH3-203ENST00000450844 PRDM2Q13029 1718 aa32.47■■■□□ 2.79
GPATCH3-203ENST00000450844 CCDC88BA6NC98 1476 aa32.35■■■□□ 2.77
GPATCH3-203ENST00000450844 TRIM41Q8WV44 630 aa32.13■■■□□ 2.73
GPATCH3-203ENST00000450844 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
GPATCH3-203ENST00000450844 ZNF608Q9ULD9 1512 aaPredicted RBP32.08■■■□□ 2.73
GPATCH3-203ENST00000450844 IFT140Q96RY7 1462 aa32.05■■■□□ 2.72
GPATCH3-203ENST00000450844 OSCARQ8IYS5 282 aa32.04■■■□□ 2.72
GPATCH3-203ENST00000450844 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
GPATCH3-203ENST00000450844 EIF4G3O43432 1585 aaKnown RBP31.94■■■□□ 2.7
GPATCH3-203ENST00000450844 ABCC8Q09428 1581 aa31.93■■■□□ 2.7
GPATCH3-203ENST00000450844 TARBP1Q13395 1621 aaKnown RBP31.87■■■□□ 2.69
GPATCH3-203ENST00000450844 RIMBP3CA6NJZ7 1639 aa31.81■■■□□ 2.68
GPATCH3-203ENST00000450844 RIMBP3BA6NNM3 1639 aa31.81■■■□□ 2.68
GPATCH3-203ENST00000450844 RIMBP3Q9UFD9 1639 aa31.81■■■□□ 2.68
GPATCH3-203ENST00000450844 POLA1P09884 1462 aaPredicted RBP31.78■■■□□ 2.68
GPATCH3-203ENST00000450844 AQRO60306 1485 aaKnown RBP eCLIP31.73■■■□□ 2.67
GPATCH3-203ENST00000450844 CHD1O14646 1710 aa31.72■■■□□ 2.67
GPATCH3-203ENST00000450844 ARHGEF11O15085 1522 aa31.69■■■□□ 2.66
GPATCH3-203ENST00000450844 RAD54L2Q9Y4B4 1467 aa31.65■■■□□ 2.66
GPATCH3-203ENST00000450844 CUX1P39880 1505 aa31.57■■■□□ 2.64
GPATCH3-203ENST00000450844 FGD5Q6ZNL6 1462 aa31.57■■■□□ 2.64
GPATCH3-203ENST00000450844 SOGA1O94964 1423 aa31.54■■■□□ 2.64
GPATCH3-203ENST00000450844 TDRD9Q8NDG6 1382 aaKnown RBP31.51■■■□□ 2.63
GPATCH3-203ENST00000450844 WDR97A6NE52 1622 aa31.48■■■□□ 2.63
GPATCH3-203ENST00000450844 SNAPC4Q5SXM2 1469 aa31.43■■■□□ 2.62
GPATCH3-203ENST00000450844 FBLN2P98095 1184 aa31.4■■■□□ 2.62
GPATCH3-203ENST00000450844 ARAP1Q96P48 1450 aa31.39■■■□□ 2.62
GPATCH3-203ENST00000450844 CLASP1Q7Z460 1538 aa31.34■■■□□ 2.61
GPATCH3-203ENST00000450844 MAGI1Q96QZ7 1491 aaPredicted RBP31.32■■■□□ 2.6
GPATCH3-203ENST00000450844 CYB5RLQ6IPT4 315 aa31.31■■■□□ 2.6
GPATCH3-203ENST00000450844 GRIN2BQ13224 1484 aa31.3■■■□□ 2.6
GPATCH3-203ENST00000450844 PBRM1Q86U86 1689 aa31.29■■■□□ 2.6
GPATCH3-203ENST00000450844 SYNJ1O43426 1573 aa31.23■■■□□ 2.59
GPATCH3-203ENST00000450844 SUPT5HO00267 1087 aaKnown RBP31.23■■■□□ 2.59
GPATCH3-203ENST00000450844 ABCA5Q8WWZ7 1642 aa31.23■■■□□ 2.59
GPATCH3-203ENST00000450844 SYNJ2O15056 1496 aa31.22■■■□□ 2.59
GPATCH3-203ENST00000450844 ABCA10Q8WWZ4 1543 aa31.19■■■□□ 2.58
GPATCH3-203ENST00000450844 GAPVD1Q14C86 1478 aa31.19■■■□□ 2.58
GPATCH3-203ENST00000450844 CHMP7Q8WUX9 453 aaPredicted RBP31.17■■■□□ 2.58
GPATCH3-203ENST00000450844 BIVM-ERCC5R4GMW8 1640 aa31.07■■■□□ 2.56
GPATCH3-203ENST00000450844 TOP2BQ02880 1626 aa31.04■■■□□ 2.56
GPATCH3-203ENST00000450844 WRNQ14191 1432 aaPredicted RBP eCLIP30.98■■■□□ 2.55
GPATCH3-203ENST00000450844 ADAMTS12P58397 1594 aa30.97■■■□□ 2.55
GPATCH3-203ENST00000450844 GRIN2AQ12879 1464 aa30.93■■■□□ 2.54
GPATCH3-203ENST00000450844 TRHP20396 242 aaPredicted RBP30.92■■■□□ 2.54
GPATCH3-203ENST00000450844 CEP170Q5SW79 1584 aa30.89■■■□□ 2.54
GPATCH3-203ENST00000450844 ERCC6L2Q5T890 1561 aa30.87■■■□□ 2.53
GPATCH3-203ENST00000450844 NUP160Q12769 1436 aa30.85■■■□□ 2.53
GPATCH3-203ENST00000450844 ERICH3Q5RHP9 1530 aa30.79■■■□□ 2.52
GPATCH3-203ENST00000450844 SHROOM2Q13796 1616 aa30.78■■■□□ 2.52
GPATCH3-203ENST00000450844 FHAD1B1AJZ9 1412 aa30.78■■■□□ 2.52
GPATCH3-203ENST00000450844 RUSC2Q8N2Y8 1516 aa30.57■■■□□ 2.48
GPATCH3-203ENST00000450844 PRG4Q92954 1404 aaPredicted RBP30.49■■■□□ 2.47
GPATCH3-203ENST00000450844 JPH4Q96JJ6 628 aa30.4■■■□□ 2.46
GPATCH3-203ENST00000450844 KIF13AQ9H1H9 1805 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 547.2 ms