RNA–Protein interactions for RNA: ENST00000450679.2

RHBDD1-210, Transcript of rhomboid domain containing 1, humanhuman

TSL 3

Gene RHBDD1, Length 514 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-210ENST00000450679 NISCHQ9Y2I1 1504 aa26.75■■□□□ 1.87
RHBDD1-210ENST00000450679 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.43
RHBDD1-210ENST00000450679 ABCC9O60706 1549 aa23.74■■□□□ 1.39
RHBDD1-210ENST00000450679 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
RHBDD1-210ENST00000450679 NACADO15069 1562 aa22.6■■□□□ 1.21
RHBDD1-210ENST00000450679 DCAF8L2P0C7V8 631 aa22.47■■□□□ 1.19
RHBDD1-210ENST00000450679 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
RHBDD1-210ENST00000450679 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
RHBDD1-210ENST00000450679 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
RHBDD1-210ENST00000450679 DCAF1Q9Y4B6 1507 aa22.13■■□□□ 1.13
RHBDD1-210ENST00000450679 PABPN1Q86U42 306 aaKnown RBP eCLIP22.11■■□□□ 1.13
RHBDD1-210ENST00000450679 DNAJC5BQ9UF47 199 aa22.1■■□□□ 1.13
RHBDD1-210ENST00000450679 BICRAQ9NZM4 1560 aa22.03■■□□□ 1.12
RHBDD1-210ENST00000450679 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
RHBDD1-210ENST00000450679 SHROOM4Q9ULL8 1493 aa21.79■■□□□ 1.08
RHBDD1-210ENST00000450679 EIF4G1Q04637 1599 aaKnown RBP21.48■■□□□ 1.03
RHBDD1-210ENST00000450679 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
RHBDD1-210ENST00000450679 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
RHBDD1-210ENST00000450679 NCAPD3P42695 1498 aa20.85■□□□□ 0.93
RHBDD1-210ENST00000450679 SMARCA4P51532 1647 aa20.83■□□□□ 0.93
RHBDD1-210ENST00000450679 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
RHBDD1-210ENST00000450679 SMARCA2P51531 1590 aa20.78■□□□□ 0.92
RHBDD1-210ENST00000450679 BAZ1AQ9NRL2 1556 aaPredicted RBP20.76■□□□□ 0.91
RHBDD1-210ENST00000450679 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
RHBDD1-210ENST00000450679 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.9
RHBDD1-210ENST00000450679 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
RHBDD1-210ENST00000450679 MROH2BQ7Z745 1585 aa20.59■□□□□ 0.89
RHBDD1-210ENST00000450679 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
RHBDD1-210ENST00000450679 NESP48681 1621 aa20.44■□□□□ 0.86
RHBDD1-210ENST00000450679 CUX2O14529 1486 aa20.43■□□□□ 0.86
RHBDD1-210ENST00000450679 LAMC3Q9Y6N6 1575 aa20.37■□□□□ 0.85
RHBDD1-210ENST00000450679 WIZO95785 1651 aa20.36■□□□□ 0.85
RHBDD1-210ENST00000450679 PDS5BQ9NTI5 1447 aa20.24■□□□□ 0.83
RHBDD1-210ENST00000450679 RSF1Q96T23 1441 aaPredicted RBP20.23■□□□□ 0.83
RHBDD1-210ENST00000450679 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
RHBDD1-210ENST00000450679 THOC2Q8NI27 1593 aaKnown RBP20.22■□□□□ 0.83
RHBDD1-210ENST00000450679 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
RHBDD1-210ENST00000450679 DNAJC5Q9H3Z4 198 aa20.2■□□□□ 0.82
RHBDD1-210ENST00000450679 TOP2AP11388 1531 aaKnown RBP20.13■□□□□ 0.81
RHBDD1-210ENST00000450679 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
RHBDD1-210ENST00000450679 CFTRP13569 1480 aa20.03■□□□□ 0.8
RHBDD1-210ENST00000450679 CEP164Q9UPV0 1460 aa20■□□□□ 0.79
RHBDD1-210ENST00000450679 WDR62O43379 1518 aa19.99■□□□□ 0.79
RHBDD1-210ENST00000450679 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
RHBDD1-210ENST00000450679 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
RHBDD1-210ENST00000450679 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
RHBDD1-210ENST00000450679 URB2Q14146 1524 aaKnown RBP19.81■□□□□ 0.76
RHBDD1-210ENST00000450679 TOPBP1Q92547 1522 aa19.63■□□□□ 0.73
RHBDD1-210ENST00000450679 ABCC8Q09428 1581 aa19.62■□□□□ 0.73
RHBDD1-210ENST00000450679 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
RHBDD1-210ENST00000450679 DNMBPQ6XZF7 1577 aa19.58■□□□□ 0.73
RHBDD1-210ENST00000450679 ZNF608Q9ULD9 1512 aaPredicted RBP19.52■□□□□ 0.72
RHBDD1-210ENST00000450679 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
RHBDD1-210ENST00000450679 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
RHBDD1-210ENST00000450679 TARBP1Q13395 1621 aaKnown RBP19.44■□□□□ 0.7
RHBDD1-210ENST00000450679 POLA1P09884 1462 aaPredicted RBP19.44■□□□□ 0.7
RHBDD1-210ENST00000450679 SUPT5HO00267 1087 aaKnown RBP19.44■□□□□ 0.7
RHBDD1-210ENST00000450679 AQRO60306 1485 aaKnown RBP eCLIP19.37■□□□□ 0.69
RHBDD1-210ENST00000450679 TRIM41Q8WV44 630 aa19.36■□□□□ 0.69
RHBDD1-210ENST00000450679 SOGA1O94964 1423 aa19.35■□□□□ 0.69
RHBDD1-210ENST00000450679 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
RHBDD1-210ENST00000450679 CUX1P39880 1505 aa19.34■□□□□ 0.69
RHBDD1-210ENST00000450679 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
RHBDD1-210ENST00000450679 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
RHBDD1-210ENST00000450679 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
RHBDD1-210ENST00000450679 CHD1O14646 1710 aa19.28■□□□□ 0.68
RHBDD1-210ENST00000450679 RIMBP3CA6NJZ7 1639 aa19.24■□□□□ 0.67
RHBDD1-210ENST00000450679 RIMBP3BA6NNM3 1639 aa19.24■□□□□ 0.67
RHBDD1-210ENST00000450679 RIMBP3Q9UFD9 1639 aa19.24■□□□□ 0.67
RHBDD1-210ENST00000450679 FBLN2P98095 1184 aa19.21■□□□□ 0.67
RHBDD1-210ENST00000450679 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
RHBDD1-210ENST00000450679 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
RHBDD1-210ENST00000450679 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
RHBDD1-210ENST00000450679 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
RHBDD1-210ENST00000450679 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
RHBDD1-210ENST00000450679 PBRM1Q86U86 1689 aa19.12■□□□□ 0.65
RHBDD1-210ENST00000450679 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
RHBDD1-210ENST00000450679 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
RHBDD1-210ENST00000450679 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
RHBDD1-210ENST00000450679 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
RHBDD1-210ENST00000450679 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
RHBDD1-210ENST00000450679 BIVM-ERCC5R4GMW8 1640 aa19.1■□□□□ 0.65
RHBDD1-210ENST00000450679 SYNJ2O15056 1496 aa19.09■□□□□ 0.65
RHBDD1-210ENST00000450679 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
RHBDD1-210ENST00000450679 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
RHBDD1-210ENST00000450679 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
RHBDD1-210ENST00000450679 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
RHBDD1-210ENST00000450679 ADAMTS12P58397 1594 aa18.94■□□□□ 0.62
RHBDD1-210ENST00000450679 GRIN2AQ12879 1464 aa18.93■□□□□ 0.62
RHBDD1-210ENST00000450679 ERICH3Q5RHP9 1530 aa18.91■□□□□ 0.62
RHBDD1-210ENST00000450679 FHAD1B1AJZ9 1412 aa18.9■□□□□ 0.62
RHBDD1-210ENST00000450679 NUP160Q12769 1436 aa18.86■□□□□ 0.61
RHBDD1-210ENST00000450679 CEP170Q5SW79 1584 aa18.85■□□□□ 0.61
RHBDD1-210ENST00000450679 SHROOM2Q13796 1616 aa18.76■□□□□ 0.59
RHBDD1-210ENST00000450679 TRHP20396 242 aaPredicted RBP18.76■□□□□ 0.59
RHBDD1-210ENST00000450679 ERCC6L2Q5T890 1561 aa18.75■□□□□ 0.59
RHBDD1-210ENST00000450679 KIF27Q86VH2 1401 aa18.73■□□□□ 0.59
RHBDD1-210ENST00000450679 IGF1RP08069 1367 aa18.68■□□□□ 0.58
RHBDD1-210ENST00000450679 CUL7Q14999 1698 aa18.67■□□□□ 0.58
RHBDD1-210ENST00000450679 RUSC2Q8N2Y8 1516 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms