RNA–Protein interactions for RNA: ENST00000450656.5

POLR2B-206, Transcript of RNA polymerase II subunit B, humanhuman

TSL 4

Gene POLR2B, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-206ENST00000450656 NISCHQ9Y2I1 1504 aa30.92■■■□□ 2.54
POLR2B-206ENST00000450656 CCDC180Q9P1Z9 1646 aa27.48■■□□□ 1.99
POLR2B-206ENST00000450656 ABCC9O60706 1549 aa26.6■■□□□ 1.85
POLR2B-206ENST00000450656 ZCCHC6Q5VYS8 1495 aaKnown RBP25.81■■□□□ 1.72
POLR2B-206ENST00000450656 NACADO15069 1562 aa25.8■■□□□ 1.72
POLR2B-206ENST00000450656 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
POLR2B-206ENST00000450656 RB1CC1Q8TDY2 1594 aa25.77■■□□□ 1.72
POLR2B-206ENST00000450656 DCAF1Q9Y4B6 1507 aa25.69■■□□□ 1.7
POLR2B-206ENST00000450656 DCAF8L2P0C7V8 631 aa25.55■■□□□ 1.68
POLR2B-206ENST00000450656 UNC13AQ9UPW8 1703 aa25.07■■□□□ 1.6
POLR2B-206ENST00000450656 BICRAQ9NZM4 1560 aa24.95■■□□□ 1.58
POLR2B-206ENST00000450656 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
POLR2B-206ENST00000450656 SHROOM4Q9ULL8 1493 aa24.89■■□□□ 1.57
POLR2B-206ENST00000450656 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
POLR2B-206ENST00000450656 EIF4G1Q04637 1599 aaKnown RBP24.29■■□□□ 1.48
POLR2B-206ENST00000450656 DNAJC5BQ9UF47 199 aa24.26■■□□□ 1.47
POLR2B-206ENST00000450656 CC2D2AQ9P2K1 1620 aa24.12■■□□□ 1.45
POLR2B-206ENST00000450656 CECR2Q9BXF3 1484 aa23.99■■□□□ 1.43
POLR2B-206ENST00000450656 BAZ1AQ9NRL2 1556 aaPredicted RBP23.98■■□□□ 1.43
POLR2B-206ENST00000450656 SMARCA4P51532 1647 aa23.94■■□□□ 1.42
POLR2B-206ENST00000450656 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
POLR2B-206ENST00000450656 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
POLR2B-206ENST00000450656 PEG3Q9GZU2 1588 aa23.8■■□□□ 1.4
POLR2B-206ENST00000450656 ATAD2BQ9ULI0 1458 aa23.79■■□□□ 1.4
POLR2B-206ENST00000450656 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
POLR2B-206ENST00000450656 HMGXB3Q12766 1538 aa23.72■■□□□ 1.39
POLR2B-206ENST00000450656 BAZ1BQ9UIG0 1483 aaKnown RBP23.59■■□□□ 1.37
POLR2B-206ENST00000450656 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.36
POLR2B-206ENST00000450656 WIZO95785 1651 aa23.48■■□□□ 1.35
POLR2B-206ENST00000450656 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
POLR2B-206ENST00000450656 LAMC3Q9Y6N6 1575 aa23.14■■□□□ 1.3
POLR2B-206ENST00000450656 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
POLR2B-206ENST00000450656 NESP48681 1621 aa23.05■■□□□ 1.28
POLR2B-206ENST00000450656 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.28
POLR2B-206ENST00000450656 CFTRP13569 1480 aa22.99■■□□□ 1.27
POLR2B-206ENST00000450656 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
POLR2B-206ENST00000450656 ERCC6Q03468 1493 aa22.96■■□□□ 1.27
POLR2B-206ENST00000450656 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
POLR2B-206ENST00000450656 KIF21AQ7Z4S6 1674 aa22.8■■□□□ 1.24
POLR2B-206ENST00000450656 FANCD2Q9BXW9 1451 aa22.79■■□□□ 1.24
POLR2B-206ENST00000450656 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
POLR2B-206ENST00000450656 CUX2O14529 1486 aa22.77■■□□□ 1.24
POLR2B-206ENST00000450656 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
POLR2B-206ENST00000450656 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
POLR2B-206ENST00000450656 MRC2Q9UBG0 1479 aa22.72■■□□□ 1.23
POLR2B-206ENST00000450656 WDR62O43379 1518 aa22.66■■□□□ 1.22
POLR2B-206ENST00000450656 URB2Q14146 1524 aaKnown RBP22.54■■□□□ 1.2
POLR2B-206ENST00000450656 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
POLR2B-206ENST00000450656 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
POLR2B-206ENST00000450656 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
POLR2B-206ENST00000450656 CUX1P39880 1505 aa22.31■■□□□ 1.16
POLR2B-206ENST00000450656 IFT140Q96RY7 1462 aa22.3■■□□□ 1.16
POLR2B-206ENST00000450656 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
POLR2B-206ENST00000450656 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
POLR2B-206ENST00000450656 FGD5Q6ZNL6 1462 aa22.21■■□□□ 1.15
POLR2B-206ENST00000450656 TOP2BQ02880 1626 aa22.2■■□□□ 1.14
POLR2B-206ENST00000450656 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
POLR2B-206ENST00000450656 BIVM-ERCC5R4GMW8 1640 aa22.18■■□□□ 1.14
POLR2B-206ENST00000450656 SOGA1O94964 1423 aa22.15■■□□□ 1.14
POLR2B-206ENST00000450656 WDR97A6NE52 1622 aa22.15■■□□□ 1.14
POLR2B-206ENST00000450656 SYNJ1O43426 1573 aa22.14■■□□□ 1.13
POLR2B-206ENST00000450656 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
POLR2B-206ENST00000450656 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
POLR2B-206ENST00000450656 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.12
POLR2B-206ENST00000450656 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
POLR2B-206ENST00000450656 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.112e-6■■■■□ 23.4
POLR2B-206ENST00000450656 TDRD9Q8NDG6 1382 aaKnown RBP21.97■■□□□ 1.11
POLR2B-206ENST00000450656 ABCA5Q8WWZ7 1642 aa21.95■■□□□ 1.1
POLR2B-206ENST00000450656 GRIN2BQ13224 1484 aa21.92■■□□□ 1.1
POLR2B-206ENST00000450656 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
POLR2B-206ENST00000450656 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
POLR2B-206ENST00000450656 PBRM1Q86U86 1689 aa21.83■■□□□ 1.09
POLR2B-206ENST00000450656 DNAJC5Q9H3Z4 198 aa21.83■■□□□ 1.09
POLR2B-206ENST00000450656 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
POLR2B-206ENST00000450656 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
POLR2B-206ENST00000450656 SYNJ2O15056 1496 aa21.77■■□□□ 1.08
POLR2B-206ENST00000450656 KIF27Q86VH2 1401 aa21.77■■□□□ 1.08
POLR2B-206ENST00000450656 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
POLR2B-206ENST00000450656 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
POLR2B-206ENST00000450656 ADAMTS12P58397 1594 aa21.71■■□□□ 1.07
POLR2B-206ENST00000450656 CHD1O14646 1710 aa21.71■■□□□ 1.07
POLR2B-206ENST00000450656 FHAD1B1AJZ9 1412 aa21.7■■□□□ 1.06
POLR2B-206ENST00000450656 CHMP7Q8WUX9 453 aaPredicted RBP21.67■■□□□ 1.06
POLR2B-206ENST00000450656 IGF1RP08069 1367 aa21.64■■□□□ 1.06
POLR2B-206ENST00000450656 FBLN2P98095 1184 aa21.63■■□□□ 1.05
POLR2B-206ENST00000450656 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
POLR2B-206ENST00000450656 CUL7Q14999 1698 aa21.63■■□□□ 1.05
POLR2B-206ENST00000450656 CLASP1Q7Z460 1538 aa21.57■■□□□ 1.04
POLR2B-206ENST00000450656 NUP160Q12769 1436 aa21.56■■□□□ 1.04
POLR2B-206ENST00000450656 CHIC1Q5VXU3 224 aa21.53■■□□□ 1.04
POLR2B-206ENST00000450656 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
POLR2B-206ENST00000450656 CARMIL1Q5VZK9 1371 aa21.5■■□□□ 1.03
POLR2B-206ENST00000450656 EEA1Q15075 1411 aa21.5■■□□□ 1.03
POLR2B-206ENST00000450656 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
POLR2B-206ENST00000450656 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
POLR2B-206ENST00000450656 RAPGEF2Q9Y4G8 1499 aa21.42■■□□□ 1.02
POLR2B-206ENST00000450656 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
POLR2B-206ENST00000450656 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
POLR2B-206ENST00000450656 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
POLR2B-206ENST00000450656 SHROOM2Q13796 1616 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms