RNA–Protein interactions for RNA: ENST00000450374.1

PTBP3-206, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 5

Gene PTBP3, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-206ENST00000450374 NISCHQ9Y2I1 1504 aa26.71■■□□□ 1.87
PTBP3-206ENST00000450374 CCDC180Q9P1Z9 1646 aa23.9■■□□□ 1.42
PTBP3-206ENST00000450374 ABCC9O60706 1549 aa23.34■■□□□ 1.33
PTBP3-206ENST00000450374 RB1CC1Q8TDY2 1594 aa22.49■■□□□ 1.19
PTBP3-206ENST00000450374 NACADO15069 1562 aa22.44■■□□□ 1.18
PTBP3-206ENST00000450374 MYO15BQ96JP2 1530 aa22.32■■□□□ 1.16
PTBP3-206ENST00000450374 ZCCHC6Q5VYS8 1495 aaKnown RBP22.27■■□□□ 1.16
PTBP3-206ENST00000450374 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
PTBP3-206ENST00000450374 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
PTBP3-206ENST00000450374 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
PTBP3-206ENST00000450374 BICRAQ9NZM4 1560 aa21.82■■□□□ 1.08
PTBP3-206ENST00000450374 PABPN1Q86U42 306 aaKnown RBP eCLIP21.7■■□□□ 1.06
PTBP3-206ENST00000450374 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
PTBP3-206ENST00000450374 SHROOM4Q9ULL8 1493 aa21.67■■□□□ 1.06
PTBP3-206ENST00000450374 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
PTBP3-206ENST00000450374 EIF4G1Q04637 1599 aaKnown RBP21.25■□□□□ 0.99
PTBP3-206ENST00000450374 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
PTBP3-206ENST00000450374 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
PTBP3-206ENST00000450374 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
PTBP3-206ENST00000450374 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
PTBP3-206ENST00000450374 NCAPD3P42695 1498 aa20.68■□□□□ 0.9
PTBP3-206ENST00000450374 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
PTBP3-206ENST00000450374 ATAD2BQ9ULI0 1458 aa20.66■□□□□ 0.9
PTBP3-206ENST00000450374 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
PTBP3-206ENST00000450374 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
PTBP3-206ENST00000450374 MROH2BQ7Z745 1585 aa20.56■□□□□ 0.88
PTBP3-206ENST00000450374 BAZ1BQ9UIG0 1483 aaKnown RBP20.5■□□□□ 0.87
PTBP3-206ENST00000450374 WIZO95785 1651 aa20.33■□□□□ 0.85
PTBP3-206ENST00000450374 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.83
PTBP3-206ENST00000450374 LAMC3Q9Y6N6 1575 aa20.19■□□□□ 0.82
PTBP3-206ENST00000450374 NESP48681 1621 aa20.17■□□□□ 0.82
PTBP3-206ENST00000450374 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
PTBP3-206ENST00000450374 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
PTBP3-206ENST00000450374 CUX2O14529 1486 aa20.05■□□□□ 0.8
PTBP3-206ENST00000450374 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
PTBP3-206ENST00000450374 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
PTBP3-206ENST00000450374 PDS5BQ9NTI5 1447 aa20■□□□□ 0.79
PTBP3-206ENST00000450374 KIF21AQ7Z4S6 1674 aa20■□□□□ 0.79
PTBP3-206ENST00000450374 CFTRP13569 1480 aa19.93■□□□□ 0.78
PTBP3-206ENST00000450374 PRDM2Q13029 1718 aa19.86■□□□□ 0.77
PTBP3-206ENST00000450374 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
PTBP3-206ENST00000450374 MRC2Q9UBG0 1479 aa19.83■□□□□ 0.76
PTBP3-206ENST00000450374 CEP164Q9UPV0 1460 aa19.83■□□□□ 0.76
PTBP3-206ENST00000450374 FANCD2Q9BXW9 1451 aa19.82■□□□□ 0.76
PTBP3-206ENST00000450374 WDR62O43379 1518 aa19.81■□□□□ 0.76
PTBP3-206ENST00000450374 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.73
PTBP3-206ENST00000450374 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
PTBP3-206ENST00000450374 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
PTBP3-206ENST00000450374 TOPBP1Q92547 1522 aa19.51■□□□□ 0.71
PTBP3-206ENST00000450374 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
PTBP3-206ENST00000450374 DNAJC5Q9H3Z4 198 aa19.44■□□□□ 0.7
PTBP3-206ENST00000450374 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
PTBP3-206ENST00000450374 POLA1P09884 1462 aaPredicted RBP19.34■□□□□ 0.69
PTBP3-206ENST00000450374 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.69
PTBP3-206ENST00000450374 CUX1P39880 1505 aa19.31■□□□□ 0.68
PTBP3-206ENST00000450374 EIF4G3O43432 1585 aaKnown RBP19.31■□□□□ 0.68
PTBP3-206ENST00000450374 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
PTBP3-206ENST00000450374 FGD5Q6ZNL6 1462 aa19.26■□□□□ 0.67
PTBP3-206ENST00000450374 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
PTBP3-206ENST00000450374 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
PTBP3-206ENST00000450374 SOGA1O94964 1423 aa19.18■□□□□ 0.66
PTBP3-206ENST00000450374 BIVM-ERCC5R4GMW8 1640 aa19.17■□□□□ 0.66
PTBP3-206ENST00000450374 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.667e-6■■□□□ 12.2
PTBP3-206ENST00000450374 TOP2BQ02880 1626 aa19.14■□□□□ 0.66
PTBP3-206ENST00000450374 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
PTBP3-206ENST00000450374 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
PTBP3-206ENST00000450374 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
PTBP3-206ENST00000450374 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
PTBP3-206ENST00000450374 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
PTBP3-206ENST00000450374 CHD1O14646 1710 aa19.06■□□□□ 0.64
PTBP3-206ENST00000450374 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
PTBP3-206ENST00000450374 PBRM1Q86U86 1689 aa19.05■□□□□ 0.64
PTBP3-206ENST00000450374 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
PTBP3-206ENST00000450374 MAGI1Q96QZ7 1491 aaPredicted RBP19.03■□□□□ 0.64
PTBP3-206ENST00000450374 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
PTBP3-206ENST00000450374 GAPVD1Q14C86 1478 aa19.01■□□□□ 0.63
PTBP3-206ENST00000450374 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
PTBP3-206ENST00000450374 ADAMTS12P58397 1594 aa18.89■□□□□ 0.62
PTBP3-206ENST00000450374 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
PTBP3-206ENST00000450374 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
PTBP3-206ENST00000450374 RIMBP3CA6NJZ7 1639 aa18.88■□□□□ 0.61
PTBP3-206ENST00000450374 RIMBP3BA6NNM3 1639 aa18.88■□□□□ 0.61
PTBP3-206ENST00000450374 RIMBP3Q9UFD9 1639 aa18.88■□□□□ 0.61
PTBP3-206ENST00000450374 ARHGEF11O15085 1522 aa18.86■□□□□ 0.61
PTBP3-206ENST00000450374 FBLN2P98095 1184 aa18.85■□□□□ 0.61
PTBP3-206ENST00000450374 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
PTBP3-206ENST00000450374 GRIN2AQ12879 1464 aa18.8■□□□□ 0.6
PTBP3-206ENST00000450374 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
PTBP3-206ENST00000450374 NUP160Q12769 1436 aa18.74■□□□□ 0.59
PTBP3-206ENST00000450374 KIF27Q86VH2 1401 aa18.73■□□□□ 0.59
PTBP3-206ENST00000450374 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
PTBP3-206ENST00000450374 CUL7Q14999 1698 aa18.7■□□□□ 0.58
PTBP3-206ENST00000450374 ARAP1Q96P48 1450 aa18.7■□□□□ 0.58
PTBP3-206ENST00000450374 TRIM41Q8WV44 630 aa18.69■□□□□ 0.58
PTBP3-206ENST00000450374 SHROOM2Q13796 1616 aa18.65■□□□□ 0.58
PTBP3-206ENST00000450374 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
PTBP3-206ENST00000450374 IGF1RP08069 1367 aa18.62■□□□□ 0.57
PTBP3-206ENST00000450374 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
PTBP3-206ENST00000450374 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
PTBP3-206ENST00000450374 CARMIL1Q5VZK9 1371 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms