RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
SPTLC3-204ENST00000450297 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
SPTLC3-204ENST00000450297 CHIC1Q5VXU3 224 aa23■■□□□ 1.27
SPTLC3-204ENST00000450297 ABCC9O60706 1549 aa21.95■■□□□ 1.1
SPTLC3-204ENST00000450297 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
SPTLC3-204ENST00000450297 RB1CC1Q8TDY2 1594 aa20.73■□□□□ 0.91
SPTLC3-204ENST00000450297 DNAJC5BQ9UF47 199 aa20.71■□□□□ 0.91
SPTLC3-204ENST00000450297 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
SPTLC3-204ENST00000450297 NACADO15069 1562 aa20.53■□□□□ 0.88
SPTLC3-204ENST00000450297 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
SPTLC3-204ENST00000450297 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
SPTLC3-204ENST00000450297 PHF23Q9BUL5 403 aaPredicted RBP20.25■□□□□ 0.83
SPTLC3-204ENST00000450297 MYO15BQ96JP2 1530 aa20.14■□□□□ 0.81
SPTLC3-204ENST00000450297 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
SPTLC3-204ENST00000450297 BICRAQ9NZM4 1560 aa20.07■□□□□ 0.8
SPTLC3-204ENST00000450297 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
SPTLC3-204ENST00000450297 DCAF1Q9Y4B6 1507 aa19.84■□□□□ 0.77
SPTLC3-204ENST00000450297 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
SPTLC3-204ENST00000450297 SHROOM4Q9ULL8 1493 aa19.79■□□□□ 0.76
SPTLC3-204ENST00000450297 CECR2Q9BXF3 1484 aa19.76■□□□□ 0.75
SPTLC3-204ENST00000450297 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
SPTLC3-204ENST00000450297 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
SPTLC3-204ENST00000450297 DNAJC5Q9H3Z4 198 aa19.14■□□□□ 0.65
SPTLC3-204ENST00000450297 FOXD1Q16676 465 aa19.07■□□□□ 0.64
SPTLC3-204ENST00000450297 ERCC6Q03468 1493 aa18.99■□□□□ 0.63
SPTLC3-204ENST00000450297 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
SPTLC3-204ENST00000450297 ATAD2BQ9ULI0 1458 aa18.91■□□□□ 0.62
SPTLC3-204ENST00000450297 CUX2O14529 1486 aa18.9■□□□□ 0.62
SPTLC3-204ENST00000450297 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
SPTLC3-204ENST00000450297 SMARCA4P51532 1647 aa18.81■□□□□ 0.6
SPTLC3-204ENST00000450297 HMGXB3Q12766 1538 aa18.78■□□□□ 0.6
SPTLC3-204ENST00000450297 NESP48681 1621 aa18.77■□□□□ 0.6
SPTLC3-204ENST00000450297 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.59
SPTLC3-204ENST00000450297 BAZ1AQ9NRL2 1556 aaPredicted RBP18.73■□□□□ 0.59
SPTLC3-204ENST00000450297 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
SPTLC3-204ENST00000450297 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
SPTLC3-204ENST00000450297 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
SPTLC3-204ENST00000450297 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
SPTLC3-204ENST00000450297 THOC2Q8NI27 1593 aaKnown RBP18.5■□□□□ 0.55
SPTLC3-204ENST00000450297 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
SPTLC3-204ENST00000450297 PLPPR3Q6T4P5 718 aa18.45■□□□□ 0.54
SPTLC3-204ENST00000450297 KIF21AQ7Z4S6 1674 aa18.42■□□□□ 0.54
SPTLC3-204ENST00000450297 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
SPTLC3-204ENST00000450297 MRC2Q9UBG0 1479 aa18.36■□□□□ 0.53
SPTLC3-204ENST00000450297 WIZO95785 1651 aa18.33■□□□□ 0.52
SPTLC3-204ENST00000450297 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
SPTLC3-204ENST00000450297 WDR62O43379 1518 aa18.26■□□□□ 0.51
SPTLC3-204ENST00000450297 FANCD2Q9BXW9 1451 aa18.24■□□□□ 0.51
SPTLC3-204ENST00000450297 RSF1Q96T23 1441 aaPredicted RBP18.18■□□□□ 0.5
SPTLC3-204ENST00000450297 CFTRP13569 1480 aa18.15■□□□□ 0.5
SPTLC3-204ENST00000450297 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
SPTLC3-204ENST00000450297 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
SPTLC3-204ENST00000450297 URB2Q14146 1524 aaKnown RBP18.06■□□□□ 0.48
SPTLC3-204ENST00000450297 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
SPTLC3-204ENST00000450297 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
SPTLC3-204ENST00000450297 ADRA2BP18089 450 aa17.93■□□□□ 0.46
SPTLC3-204ENST00000450297 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
SPTLC3-204ENST00000450297 ZNF608Q9ULD9 1512 aaPredicted RBP17.89■□□□□ 0.45
SPTLC3-204ENST00000450297 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
SPTLC3-204ENST00000450297 PIAS4Q8N2W9 510 aaPredicted RBP17.84■□□□□ 0.45
SPTLC3-204ENST00000450297 ABCC8Q09428 1581 aa17.81■□□□□ 0.44
SPTLC3-204ENST00000450297 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
SPTLC3-204ENST00000450297 FBLN2P98095 1184 aa17.8■□□□□ 0.44
SPTLC3-204ENST00000450297 RIMBP3CA6NJZ7 1639 aa17.78■□□□□ 0.44
SPTLC3-204ENST00000450297 RIMBP3BA6NNM3 1639 aa17.78■□□□□ 0.44
SPTLC3-204ENST00000450297 RIMBP3Q9UFD9 1639 aa17.78■□□□□ 0.44
SPTLC3-204ENST00000450297 MSH5O43196 834 aa17.77■□□□□ 0.44
SPTLC3-204ENST00000450297 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
SPTLC3-204ENST00000450297 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.43
SPTLC3-204ENST00000450297 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
SPTLC3-204ENST00000450297 ARHGEF11O15085 1522 aa17.73■□□□□ 0.43
SPTLC3-204ENST00000450297 EIF4G3O43432 1585 aaKnown RBP17.72■□□□□ 0.43
SPTLC3-204ENST00000450297 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
SPTLC3-204ENST00000450297 POLA1P09884 1462 aaPredicted RBP17.65■□□□□ 0.42
SPTLC3-204ENST00000450297 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
SPTLC3-204ENST00000450297 SOGA1O94964 1423 aa17.64■□□□□ 0.42
SPTLC3-204ENST00000450297 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
SPTLC3-204ENST00000450297 TARBP1Q13395 1621 aaKnown RBP17.63■□□□□ 0.41
SPTLC3-204ENST00000450297 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
SPTLC3-204ENST00000450297 CHD1O14646 1710 aa17.58■□□□□ 0.41
SPTLC3-204ENST00000450297 ARAP1Q96P48 1450 aa17.55■□□□□ 0.4
SPTLC3-204ENST00000450297 SNAPC4Q5SXM2 1469 aa17.54■□□□□ 0.4
SPTLC3-204ENST00000450297 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
SPTLC3-204ENST00000450297 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
SPTLC3-204ENST00000450297 CUX1P39880 1505 aa17.47■□□□□ 0.39
SPTLC3-204ENST00000450297 MAGI1Q96QZ7 1491 aaPredicted RBP17.45■□□□□ 0.38
SPTLC3-204ENST00000450297 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
SPTLC3-204ENST00000450297 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
SPTLC3-204ENST00000450297 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
SPTLC3-204ENST00000450297 SYNJ2O15056 1496 aa17.41■□□□□ 0.38
SPTLC3-204ENST00000450297 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
SPTLC3-204ENST00000450297 GAPVD1Q14C86 1478 aa17.38■□□□□ 0.37
SPTLC3-204ENST00000450297 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
SPTLC3-204ENST00000450297 WRNQ14191 1432 aaPredicted RBP eCLIP17.28■□□□□ 0.36
SPTLC3-204ENST00000450297 PBRM1Q86U86 1689 aa17.27■□□□□ 0.36
SPTLC3-204ENST00000450297 ABCA5Q8WWZ7 1642 aa17.23■□□□□ 0.35
SPTLC3-204ENST00000450297 GRIN2AQ12879 1464 aa17.22■□□□□ 0.35
SPTLC3-204ENST00000450297 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
SPTLC3-204ENST00000450297 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
SPTLC3-204ENST00000450297 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms