RNA–Protein interactions for RNA: ENST00000450124.1

AMPH-204, Transcript of amphiphysin, humanhuman

TSL 2

Gene AMPH, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMPH-204ENST00000450124 NISCHQ9Y2I1 1504 aa33.76■■■■□ 3
AMPH-204ENST00000450124 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
AMPH-204ENST00000450124 ABCC9O60706 1549 aa29.86■■■□□ 2.37
AMPH-204ENST00000450124 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
AMPH-204ENST00000450124 NACADO15069 1562 aa28.39■■■□□ 2.14
AMPH-204ENST00000450124 UNC13AQ9UPW8 1703 aa28.34■■■□□ 2.13
AMPH-204ENST00000450124 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
AMPH-204ENST00000450124 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.08
AMPH-204ENST00000450124 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
AMPH-204ENST00000450124 BICRAQ9NZM4 1560 aa27.92■■■□□ 2.06
AMPH-204ENST00000450124 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
AMPH-204ENST00000450124 DNAJC5BQ9UF47 199 aa27.78■■■□□ 2.04
AMPH-204ENST00000450124 PABPN1Q86U42 306 aaKnown RBP eCLIP27.74■■■□□ 2.03
AMPH-204ENST00000450124 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
AMPH-204ENST00000450124 SHROOM4Q9ULL8 1493 aa27.25■■□□□ 1.95
AMPH-204ENST00000450124 CC2D2AQ9P2K1 1620 aa27.09■■□□□ 1.93
AMPH-204ENST00000450124 EIF4G1Q04637 1599 aaKnown RBP27.07■■□□□ 1.92
AMPH-204ENST00000450124 CECR2Q9BXF3 1484 aa26.8■■□□□ 1.88
AMPH-204ENST00000450124 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
AMPH-204ENST00000450124 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
AMPH-204ENST00000450124 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
AMPH-204ENST00000450124 BAZ1AQ9NRL2 1556 aaPredicted RBP26.12■■□□□ 1.77
AMPH-204ENST00000450124 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
AMPH-204ENST00000450124 SMARCA2P51531 1590 aa26.09■■□□□ 1.77
AMPH-204ENST00000450124 MROH2BQ7Z745 1585 aa26.09■■□□□ 1.77
AMPH-204ENST00000450124 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
AMPH-204ENST00000450124 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
AMPH-204ENST00000450124 WIZO95785 1651 aa25.89■■□□□ 1.73
AMPH-204ENST00000450124 NESP48681 1621 aa25.83■■□□□ 1.73
AMPH-204ENST00000450124 KIF21AQ7Z4S6 1674 aa25.68■■□□□ 1.7
AMPH-204ENST00000450124 THOC2Q8NI27 1593 aaKnown RBP25.61■■□□□ 1.69
AMPH-204ENST00000450124 LAMC3Q9Y6N6 1575 aa25.6■■□□□ 1.69
AMPH-204ENST00000450124 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
AMPH-204ENST00000450124 RSF1Q96T23 1441 aaPredicted RBP25.55■■□□□ 1.68
AMPH-204ENST00000450124 CUX2O14529 1486 aa25.51■■□□□ 1.67
AMPH-204ENST00000450124 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
AMPH-204ENST00000450124 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
AMPH-204ENST00000450124 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
AMPH-204ENST00000450124 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
AMPH-204ENST00000450124 WDR62O43379 1518 aa25.19■■□□□ 1.62
AMPH-204ENST00000450124 CFTRP13569 1480 aa25.19■■□□□ 1.62
AMPH-204ENST00000450124 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
AMPH-204ENST00000450124 CCDC88BA6NC98 1476 aa25.11■■□□□ 1.61
AMPH-204ENST00000450124 FANCD2Q9BXW9 1451 aa25.11■■□□□ 1.61
AMPH-204ENST00000450124 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
AMPH-204ENST00000450124 DNAJC5Q9H3Z4 198 aa25.07■■□□□ 1.6
AMPH-204ENST00000450124 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
AMPH-204ENST00000450124 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
AMPH-204ENST00000450124 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
AMPH-204ENST00000450124 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
AMPH-204ENST00000450124 TARBP1Q13395 1621 aaKnown RBP24.63■■□□□ 1.53
AMPH-204ENST00000450124 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
AMPH-204ENST00000450124 IFT140Q96RY7 1462 aa24.55■■□□□ 1.52
AMPH-204ENST00000450124 POLA1P09884 1462 aaPredicted RBP24.51■■□□□ 1.51
AMPH-204ENST00000450124 CUX1P39880 1505 aa24.51■■□□□ 1.51
AMPH-204ENST00000450124 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
AMPH-204ENST00000450124 CHD1O14646 1710 aa24.47■■□□□ 1.51
AMPH-204ENST00000450124 WDR97A6NE52 1622 aa24.47■■□□□ 1.51
AMPH-204ENST00000450124 SUPT5HO00267 1087 aaKnown RBP24.46■■□□□ 1.51
AMPH-204ENST00000450124 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
AMPH-204ENST00000450124 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
AMPH-204ENST00000450124 AQRO60306 1485 aaKnown RBP eCLIP24.37■■□□□ 1.49
AMPH-204ENST00000450124 PBRM1Q86U86 1689 aa24.29■■□□□ 1.48
AMPH-204ENST00000450124 RIMBP3CA6NJZ7 1639 aa24.26■■□□□ 1.47
AMPH-204ENST00000450124 RIMBP3BA6NNM3 1639 aa24.26■■□□□ 1.47
AMPH-204ENST00000450124 RIMBP3Q9UFD9 1639 aa24.26■■□□□ 1.47
AMPH-204ENST00000450124 BIVM-ERCC5R4GMW8 1640 aa24.25■■□□□ 1.47
AMPH-204ENST00000450124 SOGA1O94964 1423 aa24.25■■□□□ 1.47
AMPH-204ENST00000450124 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
AMPH-204ENST00000450124 OSCARQ8IYS5 282 aa24.21■■□□□ 1.47
AMPH-204ENST00000450124 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
AMPH-204ENST00000450124 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
AMPH-204ENST00000450124 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
AMPH-204ENST00000450124 SNAPC4Q5SXM2 1469 aa24.16■■□□□ 1.46
AMPH-204ENST00000450124 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
AMPH-204ENST00000450124 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
AMPH-204ENST00000450124 TRIM41Q8WV44 630 aa24.08■■□□□ 1.45
AMPH-204ENST00000450124 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
AMPH-204ENST00000450124 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
AMPH-204ENST00000450124 MAGI1Q96QZ7 1491 aaPredicted RBP24.03■■□□□ 1.44
AMPH-204ENST00000450124 WRNQ14191 1432 aaPredicted RBP eCLIP24.02■■□□□ 1.44
AMPH-204ENST00000450124 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
AMPH-204ENST00000450124 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
AMPH-204ENST00000450124 SYNJ2O15056 1496 aa23.95■■□□□ 1.42
AMPH-204ENST00000450124 ARAP1Q96P48 1450 aa23.93■■□□□ 1.42
AMPH-204ENST00000450124 FBLN2P98095 1184 aa23.92■■□□□ 1.42
AMPH-204ENST00000450124 CEP170Q5SW79 1584 aa23.85■■□□□ 1.41
AMPH-204ENST00000450124 GRIN2AQ12879 1464 aa23.81■■□□□ 1.4
AMPH-204ENST00000450124 ERCC6L2Q5T890 1561 aa23.8■■□□□ 1.4
AMPH-204ENST00000450124 ERICH3Q5RHP9 1530 aa23.79■■□□□ 1.4
AMPH-204ENST00000450124 CHMP7Q8WUX9 453 aaPredicted RBP23.77■■□□□ 1.4
AMPH-204ENST00000450124 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
AMPH-204ENST00000450124 NUP160Q12769 1436 aa23.73■■□□□ 1.39
AMPH-204ENST00000450124 CYB5RLQ6IPT4 315 aa23.7■■□□□ 1.38
AMPH-204ENST00000450124 FHAD1B1AJZ9 1412 aa23.68■■□□□ 1.38
AMPH-204ENST00000450124 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.38
AMPH-204ENST00000450124 CUL7Q14999 1698 aa23.58■■□□□ 1.37
AMPH-204ENST00000450124 IGF1RP08069 1367 aa23.49■■□□□ 1.35
AMPH-204ENST00000450124 KIF27Q86VH2 1401 aa23.47■■□□□ 1.35
AMPH-204ENST00000450124 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms