RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 NISCHQ9Y2I1 1504 aa42.76■■■■■ 4.44
CLTCL1-203ENST00000449918 CCDC180Q9P1Z9 1646 aa38.15■■■■□ 3.7
CLTCL1-203ENST00000449918 ABCC9O60706 1549 aa37.87■■■■□ 3.65
CLTCL1-203ENST00000449918 RB1CC1Q8TDY2 1594 aa36.21■■■■□ 3.39
CLTCL1-203ENST00000449918 DCAF8L2P0C7V8 631 aa36.07■■■■□ 3.36
CLTCL1-203ENST00000449918 NACADO15069 1562 aa36.06■■■■□ 3.36
CLTCL1-203ENST00000449918 MYO15BQ96JP2 1530 aa35.69■■■■□ 3.3
CLTCL1-203ENST00000449918 ZCCHC6Q5VYS8 1495 aaKnown RBP35.48■■■■□ 3.27
CLTCL1-203ENST00000449918 PABPN1Q86U42 306 aaKnown RBP eCLIP35.38■■■■□ 3.25
CLTCL1-203ENST00000449918 DCAF1Q9Y4B6 1507 aa35.35■■■■□ 3.25
CLTCL1-203ENST00000449918 DNAJC5BQ9UF47 199 aa35.24■■■■□ 3.23
CLTCL1-203ENST00000449918 UNC13AQ9UPW8 1703 aa35.23■■■■□ 3.23
CLTCL1-203ENST00000449918 BICRAQ9NZM4 1560 aa35.07■■■■□ 3.2
CLTCL1-203ENST00000449918 SCRIBQ14160 1630 aa34.8■■■■□ 3.16
CLTCL1-203ENST00000449918 SHROOM4Q9ULL8 1493 aa34.73■■■■□ 3.15
CLTCL1-203ENST00000449918 EIF4G1Q04637 1599 aaKnown RBP34.23■■■■□ 3.07
CLTCL1-203ENST00000449918 CC2D2AQ9P2K1 1620 aa34.2■■■■□ 3.07
CLTCL1-203ENST00000449918 CECR2Q9BXF3 1484 aa34.11■■■■□ 3.05
CLTCL1-203ENST00000449918 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
CLTCL1-203ENST00000449918 ATAD2BQ9ULI0 1458 aa33.24■■■□□ 2.91
CLTCL1-203ENST00000449918 SMARCA4P51532 1647 aa33.23■■■□□ 2.91
CLTCL1-203ENST00000449918 BAZ1AQ9NRL2 1556 aaPredicted RBP33.17■■■□□ 2.9
CLTCL1-203ENST00000449918 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
CLTCL1-203ENST00000449918 HMGXB3Q12766 1538 aa33.04■■■□□ 2.88
CLTCL1-203ENST00000449918 BAZ1BQ9UIG0 1483 aaKnown RBP32.94■■■□□ 2.86
CLTCL1-203ENST00000449918 MROH2BQ7Z745 1585 aa32.92■■■□□ 2.86
CLTCL1-203ENST00000449918 PEG3Q9GZU2 1588 aa32.92■■■□□ 2.86
CLTCL1-203ENST00000449918 ERCC6Q03468 1493 aa32.73■■■□□ 2.83
CLTCL1-203ENST00000449918 NESP48681 1621 aa32.61■■■□□ 2.81
CLTCL1-203ENST00000449918 CUX2O14529 1486 aa32.53■■■□□ 2.8
CLTCL1-203ENST00000449918 WIZO95785 1651 aa32.5■■■□□ 2.79
CLTCL1-203ENST00000449918 LAMC3Q9Y6N6 1575 aa32.46■■■□□ 2.79
CLTCL1-203ENST00000449918 RSF1Q96T23 1441 aaPredicted RBP32.42■■■□□ 2.78
CLTCL1-203ENST00000449918 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
CLTCL1-203ENST00000449918 CADPSQ9ULU8 1353 aa32.34■■■□□ 2.77
CLTCL1-203ENST00000449918 TOP2AP11388 1531 aaKnown RBP32.17■■■□□ 2.74
CLTCL1-203ENST00000449918 DNAJC5Q9H3Z4 198 aa32.17■■■□□ 2.74
CLTCL1-203ENST00000449918 THOC2Q8NI27 1593 aaKnown RBP32.15■■■□□ 2.74
CLTCL1-203ENST00000449918 KIF21AQ7Z4S6 1674 aa32.13■■■□□ 2.73
CLTCL1-203ENST00000449918 CFTRP13569 1480 aa32.01■■■□□ 2.71
CLTCL1-203ENST00000449918 MRC2Q9UBG0 1479 aa31.98■■■□□ 2.71
CLTCL1-203ENST00000449918 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
CLTCL1-203ENST00000449918 FANCD2Q9BXW9 1451 aa31.93■■■□□ 2.7
CLTCL1-203ENST00000449918 WDR62O43379 1518 aa31.86■■■□□ 2.69
CLTCL1-203ENST00000449918 CCDC88BA6NC98 1476 aa31.83■■■□□ 2.69
CLTCL1-203ENST00000449918 URB2Q14146 1524 aaKnown RBP31.6■■■□□ 2.65
CLTCL1-203ENST00000449918 PRDM2Q13029 1718 aa31.58■■■□□ 2.65
CLTCL1-203ENST00000449918 ABCC8Q09428 1581 aa31.38■■■□□ 2.61
CLTCL1-203ENST00000449918 TOPBP1Q92547 1522 aa31.34■■■□□ 2.61
CLTCL1-203ENST00000449918 SUPT5HO00267 1087 aaKnown RBP31.31■■■□□ 2.6
CLTCL1-203ENST00000449918 IFT140Q96RY7 1462 aa31.31■■■□□ 2.6
CLTCL1-203ENST00000449918 DNMBPQ6XZF7 1577 aa31.25■■■□□ 2.59
CLTCL1-203ENST00000449918 OSCARQ8IYS5 282 aa31.2■■■□□ 2.59
CLTCL1-203ENST00000449918 ZNF608Q9ULD9 1512 aaPredicted RBP31.17■■■□□ 2.58
CLTCL1-203ENST00000449918 POLA1P09884 1462 aaPredicted RBP31.05■■■□□ 2.56
CLTCL1-203ENST00000449918 TARBP1Q13395 1621 aaKnown RBP30.99■■■□□ 2.55
CLTCL1-203ENST00000449918 SOGA1O94964 1423 aa30.98■■■□□ 2.55
CLTCL1-203ENST00000449918 EIF4G3O43432 1585 aaKnown RBP30.97■■■□□ 2.55
CLTCL1-203ENST00000449918 AQRO60306 1485 aaKnown RBP eCLIP30.96■■■□□ 2.55
CLTCL1-203ENST00000449918 RAD54L2Q9Y4B4 1467 aa30.93■■■□□ 2.54
CLTCL1-203ENST00000449918 CUX1P39880 1505 aa30.91■■■□□ 2.54
CLTCL1-203ENST00000449918 FGD5Q6ZNL6 1462 aa30.9■■■□□ 2.54
CLTCL1-203ENST00000449918 TRIM41Q8WV44 630 aa30.9■■■□□ 2.54
CLTCL1-203ENST00000449918 TDRD9Q8NDG6 1382 aaKnown RBP30.85■■■□□ 2.53
CLTCL1-203ENST00000449918 FBLN2P98095 1184 aa30.77■■■□□ 2.52
CLTCL1-203ENST00000449918 WDR97A6NE52 1622 aa30.76■■■□□ 2.51
CLTCL1-203ENST00000449918 GRIN2BQ13224 1484 aa30.65■■■□□ 2.5
CLTCL1-203ENST00000449918 SNAPC4Q5SXM2 1469 aa30.64■■■□□ 2.5
CLTCL1-203ENST00000449918 CHD1O14646 1710 aa30.64■■■□□ 2.5
CLTCL1-203ENST00000449918 CHMP7Q8WUX9 453 aaPredicted RBP30.62■■■□□ 2.49
CLTCL1-203ENST00000449918 MAGI1Q96QZ7 1491 aaPredicted RBP30.61■■■□□ 2.49
CLTCL1-203ENST00000449918 ABCA10Q8WWZ4 1543 aa30.59■■■□□ 2.49
CLTCL1-203ENST00000449918 WRNQ14191 1432 aaPredicted RBP eCLIP30.59■■■□□ 2.49
CLTCL1-203ENST00000449918 RIMBP3CA6NJZ7 1639 aa30.58■■■□□ 2.49
CLTCL1-203ENST00000449918 RIMBP3BA6NNM3 1639 aa30.58■■■□□ 2.49
CLTCL1-203ENST00000449918 RIMBP3Q9UFD9 1639 aa30.58■■■□□ 2.49
CLTCL1-203ENST00000449918 GAPVD1Q14C86 1478 aa30.58■■■□□ 2.49
CLTCL1-203ENST00000449918 ARHGEF11O15085 1522 aa30.57■■■□□ 2.48
CLTCL1-203ENST00000449918 TOP2BQ02880 1626 aa30.51■■■□□ 2.48
CLTCL1-203ENST00000449918 SYNJ2O15056 1496 aa30.5■■■□□ 2.47
CLTCL1-203ENST00000449918 BIVM-ERCC5R4GMW8 1640 aa30.47■■■□□ 2.47
CLTCL1-203ENST00000449918 SYNJ1O43426 1573 aa30.45■■■□□ 2.47
CLTCL1-203ENST00000449918 ABCA5Q8WWZ7 1642 aa30.44■■■□□ 2.46
CLTCL1-203ENST00000449918 CYB5RLQ6IPT4 315 aa30.43■■■□□ 2.46
CLTCL1-203ENST00000449918 PBRM1Q86U86 1689 aa30.42■■■□□ 2.46
CLTCL1-203ENST00000449918 CLASP1Q7Z460 1538 aa30.35■■■□□ 2.45
CLTCL1-203ENST00000449918 ARAP1Q96P48 1450 aa30.28■■■□□ 2.44
CLTCL1-203ENST00000449918 GRIN2AQ12879 1464 aa30.23■■■□□ 2.43
CLTCL1-203ENST00000449918 FHAD1B1AJZ9 1412 aa30.22■■■□□ 2.43
CLTCL1-203ENST00000449918 ERICH3Q5RHP9 1530 aa30.22■■■□□ 2.43
CLTCL1-203ENST00000449918 ADAMTS12P58397 1594 aa30.2■■■□□ 2.42
CLTCL1-203ENST00000449918 NUP160Q12769 1436 aa30.12■■■□□ 2.41
CLTCL1-203ENST00000449918 CEP170Q5SW79 1584 aa30.05■■■□□ 2.4
CLTCL1-203ENST00000449918 KIF27Q86VH2 1401 aa30.02■■■□□ 2.4
CLTCL1-203ENST00000449918 TRHP20396 242 aaPredicted RBP29.99■■■□□ 2.39
CLTCL1-203ENST00000449918 IGF1RP08069 1367 aa29.96■■■□□ 2.39
CLTCL1-203ENST00000449918 JPH4Q96JJ6 628 aa29.9■■■□□ 2.38
CLTCL1-203ENST00000449918 ERCC6L2Q5T890 1561 aa29.88■■■□□ 2.37
CLTCL1-203ENST00000449918 SHROOM2Q13796 1616 aa29.88■■■□□ 2.37
CLTCL1-203ENST00000449918 PRG4Q92954 1404 aaPredicted RBP29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms