RNA–Protein interactions for RNA: ENST00000449556.5

ATP6AP1-206, Transcript of ATPase H+ transporting accessory protein 1, humanhuman

TSL 5

Gene ATP6AP1, Length 720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1-206ENST00000449556 NISCHQ9Y2I1 1504 aa57.61■■■■■ 6.81
ATP6AP1-206ENST00000449556 ABCC9O60706 1549 aa52.11■■■■■ 5.93
ATP6AP1-206ENST00000449556 CCDC180Q9P1Z9 1646 aa51.82■■■■■ 5.89
ATP6AP1-206ENST00000449556 RB1CC1Q8TDY2 1594 aa49.38■■■■■ 5.5
ATP6AP1-206ENST00000449556 DNAJC5BQ9UF47 199 aa49.19■■■■■ 5.47
ATP6AP1-206ENST00000449556 NACADO15069 1562 aa48.97■■■■■ 5.43
ATP6AP1-206ENST00000449556 DCAF8L2P0C7V8 631 aa48.66■■■■■ 5.38
ATP6AP1-206ENST00000449556 UNC13AQ9UPW8 1703 aa48.6■■■■■ 5.37
ATP6AP1-206ENST00000449556 PABPN1Q86U42 306 aaKnown RBP eCLIP48.46■■■■■ 5.35
ATP6AP1-206ENST00000449556 BICRAQ9NZM4 1560 aa48.15■■■■■ 5.3
ATP6AP1-206ENST00000449556 MYO15BQ96JP2 1530 aa48.15■■■■■ 5.3
ATP6AP1-206ENST00000449556 ZCCHC6Q5VYS8 1495 aaKnown RBP47.72■■■■■ 5.23
ATP6AP1-206ENST00000449556 DCAF1Q9Y4B6 1507 aa47.49■■■■■ 5.19
ATP6AP1-206ENST00000449556 SCRIBQ14160 1630 aa47.3■■■■■ 5.16
ATP6AP1-206ENST00000449556 SHROOM4Q9ULL8 1493 aa47.15■■■■■ 5.14
ATP6AP1-206ENST00000449556 CC2D2AQ9P2K1 1620 aa47.08■■■■■ 5.13
ATP6AP1-206ENST00000449556 CECR2Q9BXF3 1484 aa46.89■■■■■ 5.1
ATP6AP1-206ENST00000449556 EIF4G1Q04637 1599 aaKnown RBP46.89■■■■■ 5.1
ATP6AP1-206ENST00000449556 NCAPD3P42695 1498 aa45.21■■■■■ 4.83
ATP6AP1-206ENST00000449556 DNAJC5Q9H3Z4 198 aa45.15■■■■■ 4.82
ATP6AP1-206ENST00000449556 ATAD2BQ9ULI0 1458 aa45.1■■■■■ 4.81
ATP6AP1-206ENST00000449556 SMARCA4P51532 1647 aa45.05■■■■■ 4.8
ATP6AP1-206ENST00000449556 SMARCA2P51531 1590 aa44.89■■■■■ 4.78
ATP6AP1-206ENST00000449556 ERCC6Q03468 1493 aa44.88■■■■■ 4.78
ATP6AP1-206ENST00000449556 HMGXB3Q12766 1538 aa44.88■■■■■ 4.78
ATP6AP1-206ENST00000449556 CUX2O14529 1486 aa44.86■■■■■ 4.77
ATP6AP1-206ENST00000449556 NESP48681 1621 aa44.77■■■■■ 4.76
ATP6AP1-206ENST00000449556 BAZ1AQ9NRL2 1556 aaPredicted RBP44.68■■■■■ 4.74
ATP6AP1-206ENST00000449556 BAZ1BQ9UIG0 1483 aaKnown RBP44.6■■■■■ 4.73
ATP6AP1-206ENST00000449556 PEG3Q9GZU2 1588 aa44.56■■■■■ 4.72
ATP6AP1-206ENST00000449556 MROH2BQ7Z745 1585 aa44.48■■■■■ 4.71
ATP6AP1-206ENST00000449556 THOC2Q8NI27 1593 aaKnown RBP44.35■■■■■ 4.69
ATP6AP1-206ENST00000449556 LAMC3Q9Y6N6 1575 aa44.25■■■■■ 4.67
ATP6AP1-206ENST00000449556 KIF21AQ7Z4S6 1674 aa44.24■■■■■ 4.67
ATP6AP1-206ENST00000449556 WIZO95785 1651 aa44■■■■■ 4.63
ATP6AP1-206ENST00000449556 PDS5BQ9NTI5 1447 aa43.9■■■■■ 4.62
ATP6AP1-206ENST00000449556 CADPSQ9ULU8 1353 aa43.8■■■■■ 4.6
ATP6AP1-206ENST00000449556 MRC2Q9UBG0 1479 aa43.64■■■■■ 4.58
ATP6AP1-206ENST00000449556 WDR62O43379 1518 aa43.59■■■■■ 4.57
ATP6AP1-206ENST00000449556 CEP164Q9UPV0 1460 aa43.41■■■■■ 4.54
ATP6AP1-206ENST00000449556 RSF1Q96T23 1441 aaPredicted RBP43.39■■■■■ 4.54
ATP6AP1-206ENST00000449556 FANCD2Q9BXW9 1451 aa43.37■■■■■ 4.53
ATP6AP1-206ENST00000449556 CFTRP13569 1480 aa43.3■■■■■ 4.52
ATP6AP1-206ENST00000449556 TOP2AP11388 1531 aaKnown RBP43.28■■■■■ 4.52
ATP6AP1-206ENST00000449556 URB2Q14146 1524 aaKnown RBP43.12■■■■■ 4.49
ATP6AP1-206ENST00000449556 TRIM41Q8WV44 630 aa43.12■■■■■ 4.49
ATP6AP1-206ENST00000449556 PRDM2Q13029 1718 aa43.02■■■■■ 4.48
ATP6AP1-206ENST00000449556 CCDC88BA6NC98 1476 aa42.82■■■■■ 4.45
ATP6AP1-206ENST00000449556 OSCARQ8IYS5 282 aa42.72■■■■■ 4.43
ATP6AP1-206ENST00000449556 ZNF608Q9ULD9 1512 aaPredicted RBP42.65■■■■■ 4.42
ATP6AP1-206ENST00000449556 TOPBP1Q92547 1522 aa42.56■■■■■ 4.4
ATP6AP1-206ENST00000449556 IFT140Q96RY7 1462 aa42.52■■■■■ 4.4
ATP6AP1-206ENST00000449556 RIMBP3CA6NJZ7 1639 aa42.44■■■■■ 4.38
ATP6AP1-206ENST00000449556 RIMBP3BA6NNM3 1639 aa42.44■■■■■ 4.38
ATP6AP1-206ENST00000449556 RIMBP3Q9UFD9 1639 aa42.44■■■■■ 4.38
ATP6AP1-206ENST00000449556 EIF4G3O43432 1585 aaKnown RBP42.39■■■■■ 4.38
ATP6AP1-206ENST00000449556 DNMBPQ6XZF7 1577 aa42.36■■■■■ 4.37
ATP6AP1-206ENST00000449556 TARBP1Q13395 1621 aaKnown RBP42.27■■■■■ 4.36
ATP6AP1-206ENST00000449556 ABCC8Q09428 1581 aa42.27■■■■■ 4.36
ATP6AP1-206ENST00000449556 CHD1O14646 1710 aa42.21■■■■■ 4.35
ATP6AP1-206ENST00000449556 ARHGEF11O15085 1522 aa42.2■■■■■ 4.35
ATP6AP1-206ENST00000449556 AQRO60306 1485 aaKnown RBP eCLIP42.17■■■■■ 4.342e-7■■■■■ 28.2
ATP6AP1-206ENST00000449556 POLA1P09884 1462 aaPredicted RBP42.11■■■■■ 4.33
ATP6AP1-206ENST00000449556 RAD54L2Q9Y4B4 1467 aa42.02■■■■■ 4.32
ATP6AP1-206ENST00000449556 TDRD9Q8NDG6 1382 aaKnown RBP41.85■■■■■ 4.29
ATP6AP1-206ENST00000449556 FBLN2P98095 1184 aa41.84■■■■■ 4.29
ATP6AP1-206ENST00000449556 SOGA1O94964 1423 aa41.84■■■■■ 4.29
ATP6AP1-206ENST00000449556 CYB5RLQ6IPT4 315 aa41.83■■■■■ 4.29
ATP6AP1-206ENST00000449556 FGD5Q6ZNL6 1462 aa41.82■■■■■ 4.29
ATP6AP1-206ENST00000449556 ARAP1Q96P48 1450 aa41.81■■■■■ 4.28
ATP6AP1-206ENST00000449556 CUX1P39880 1505 aa41.79■■■■■ 4.28
ATP6AP1-206ENST00000449556 SNAPC4Q5SXM2 1469 aa41.73■■■■■ 4.27
ATP6AP1-206ENST00000449556 WDR97A6NE52 1622 aa41.65■■■■■ 4.26
ATP6AP1-206ENST00000449556 CLASP1Q7Z460 1538 aa41.61■■■■■ 4.25
ATP6AP1-206ENST00000449556 PBRM1Q86U86 1689 aa41.52■■■■■ 4.24
ATP6AP1-206ENST00000449556 MAGI1Q96QZ7 1491 aaPredicted RBP41.51■■■■■ 4.24
ATP6AP1-206ENST00000449556 GRIN2BQ13224 1484 aa41.49■■■■■ 4.23
ATP6AP1-206ENST00000449556 SYNJ1O43426 1573 aa41.46■■■■■ 4.23
ATP6AP1-206ENST00000449556 SUPT5HO00267 1087 aaKnown RBP41.43■■■■■ 4.22
ATP6AP1-206ENST00000449556 CHMP7Q8WUX9 453 aaPredicted RBP41.43■■■■■ 4.22
ATP6AP1-206ENST00000449556 SYNJ2O15056 1496 aa41.4■■■■■ 4.22
ATP6AP1-206ENST00000449556 TRHP20396 242 aaPredicted RBP41.39■■■■■ 4.22
ATP6AP1-206ENST00000449556 GAPVD1Q14C86 1478 aa41.34■■■■■ 4.21
ATP6AP1-206ENST00000449556 ABCA5Q8WWZ7 1642 aa41.34■■■■■ 4.21
ATP6AP1-206ENST00000449556 ABCA10Q8WWZ4 1543 aa41.28■■■■■ 4.2
ATP6AP1-206ENST00000449556 ERCC6L2Q5T890 1561 aa41.08■■■■■ 4.17
ATP6AP1-206ENST00000449556 BIVM-ERCC5R4GMW8 1640 aa41.06■■■■■ 4.16
ATP6AP1-206ENST00000449556 ADAMTS12P58397 1594 aa41.03■■■■■ 4.16
ATP6AP1-206ENST00000449556 GRIN2AQ12879 1464 aa41.02■■■■■ 4.16
ATP6AP1-206ENST00000449556 TOP2BQ02880 1626 aa41■■■■■ 4.15
ATP6AP1-206ENST00000449556 CEP170Q5SW79 1584 aa40.99■■■■■ 4.15
ATP6AP1-206ENST00000449556 WRNQ14191 1432 aaPredicted RBP eCLIP40.98■■■■■ 4.15
ATP6AP1-206ENST00000449556 NUP160Q12769 1436 aa40.88■■■■■ 4.13
ATP6AP1-206ENST00000449556 SHROOM2Q13796 1616 aa40.81■■■■■ 4.12
ATP6AP1-206ENST00000449556 FHAD1B1AJZ9 1412 aa40.76■■■■■ 4.12
ATP6AP1-206ENST00000449556 ERICH3Q5RHP9 1530 aa40.72■■■■■ 4.11
ATP6AP1-206ENST00000449556 KIF13AQ9H1H9 1805 aa40.51■■■■■ 4.08
ATP6AP1-206ENST00000449556 PRG4Q92954 1404 aaPredicted RBP40.49■■■■■ 4.07
ATP6AP1-206ENST00000449556 RUSC2Q8N2Y8 1516 aa40.47■■■■■ 4.07
ATP6AP1-206ENST00000449556 JPH4Q96JJ6 628 aa40.39■■■■■ 4.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms