RNA–Protein interactions for RNA: ENST00000449472.1

CCDC197-203, Transcript of coiled-coil domain containing 197, humanhuman

TSL 3

Gene CCDC197, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-203ENST00000449472 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
CCDC197-203ENST00000449472 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
CCDC197-203ENST00000449472 ABCC9O60706 1549 aa25.28■■□□□ 1.64
CCDC197-203ENST00000449472 DCAF8L2P0C7V8 631 aa24.14■■□□□ 1.45
CCDC197-203ENST00000449472 RB1CC1Q8TDY2 1594 aa24.1■■□□□ 1.45
CCDC197-203ENST00000449472 NACADO15069 1562 aa24■■□□□ 1.43
CCDC197-203ENST00000449472 MYO15BQ96JP2 1530 aa23.72■■□□□ 1.39
CCDC197-203ENST00000449472 PABPN1Q86U42 306 aaKnown RBP eCLIP23.67■■□□□ 1.38
CCDC197-203ENST00000449472 ZCCHC6Q5VYS8 1495 aaKnown RBP23.67■■□□□ 1.38
CCDC197-203ENST00000449472 UNC13AQ9UPW8 1703 aa23.61■■□□□ 1.37
CCDC197-203ENST00000449472 DNAJC5BQ9UF47 199 aa23.6■■□□□ 1.37
CCDC197-203ENST00000449472 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
CCDC197-203ENST00000449472 BICRAQ9NZM4 1560 aa23.44■■□□□ 1.34
CCDC197-203ENST00000449472 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
CCDC197-203ENST00000449472 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
CCDC197-203ENST00000449472 CC2D2AQ9P2K1 1620 aa22.82■■□□□ 1.24
CCDC197-203ENST00000449472 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
CCDC197-203ENST00000449472 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
CCDC197-203ENST00000449472 NCAPD3P42695 1498 aa22.19■■□□□ 1.14
CCDC197-203ENST00000449472 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
CCDC197-203ENST00000449472 ATAD2BQ9ULI0 1458 aa22.17■■□□□ 1.14
CCDC197-203ENST00000449472 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
CCDC197-203ENST00000449472 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
CCDC197-203ENST00000449472 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.12
CCDC197-203ENST00000449472 HMGXB3Q12766 1538 aa21.98■■□□□ 1.11
CCDC197-203ENST00000449472 BAZ1BQ9UIG0 1483 aaKnown RBP21.95■■□□□ 1.1
CCDC197-203ENST00000449472 PEG3Q9GZU2 1588 aa21.94■■□□□ 1.1
CCDC197-203ENST00000449472 NESP48681 1621 aa21.81■■□□□ 1.08
CCDC197-203ENST00000449472 WIZO95785 1651 aa21.78■■□□□ 1.08
CCDC197-203ENST00000449472 ERCC6Q03468 1493 aa21.77■■□□□ 1.08
CCDC197-203ENST00000449472 RSF1Q96T23 1441 aaPredicted RBP21.66■■□□□ 1.06
CCDC197-203ENST00000449472 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
CCDC197-203ENST00000449472 CUX2O14529 1486 aa21.6■■□□□ 1.05
CCDC197-203ENST00000449472 CADPSQ9ULU8 1353 aa21.55■■□□□ 1.04
CCDC197-203ENST00000449472 PDS5BQ9NTI5 1447 aa21.51■■□□□ 1.03
CCDC197-203ENST00000449472 KIF21AQ7Z4S6 1674 aa21.49■■□□□ 1.03
CCDC197-203ENST00000449472 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
CCDC197-203ENST00000449472 THOC2Q8NI27 1593 aaKnown RBP21.44■■□□□ 1.02
CCDC197-203ENST00000449472 DNAJC5Q9H3Z4 198 aa21.42■■□□□ 1.02
CCDC197-203ENST00000449472 CFTRP13569 1480 aa21.33■■□□□ 1.01
CCDC197-203ENST00000449472 MRC2Q9UBG0 1479 aa21.29■■□□□ 1
CCDC197-203ENST00000449472 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
CCDC197-203ENST00000449472 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
CCDC197-203ENST00000449472 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
CCDC197-203ENST00000449472 WDR62O43379 1518 aa21.22■□□□□ 0.99
CCDC197-203ENST00000449472 URB2Q14146 1524 aaKnown RBP21.1■□□□□ 0.97
CCDC197-203ENST00000449472 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
CCDC197-203ENST00000449472 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
CCDC197-203ENST00000449472 TOPBP1Q92547 1522 aa20.91■□□□□ 0.94
CCDC197-203ENST00000449472 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
CCDC197-203ENST00000449472 ZNF608Q9ULD9 1512 aaPredicted RBP20.83■□□□□ 0.93
CCDC197-203ENST00000449472 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
CCDC197-203ENST00000449472 IFT140Q96RY7 1462 aa20.82■□□□□ 0.92
CCDC197-203ENST00000449472 OSCARQ8IYS5 282 aa20.77■□□□□ 0.92
CCDC197-203ENST00000449472 POLA1P09884 1462 aaPredicted RBP20.71■□□□□ 0.91
CCDC197-203ENST00000449472 TARBP1Q13395 1621 aaKnown RBP20.7■□□□□ 0.9
CCDC197-203ENST00000449472 AQRO60306 1485 aaKnown RBP eCLIP20.69■□□□□ 0.9
CCDC197-203ENST00000449472 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
CCDC197-203ENST00000449472 SOGA1O94964 1423 aa20.67■□□□□ 0.9
CCDC197-203ENST00000449472 CUX1P39880 1505 aa20.66■□□□□ 0.9
CCDC197-203ENST00000449472 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
CCDC197-203ENST00000449472 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
CCDC197-203ENST00000449472 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
CCDC197-203ENST00000449472 TRIM41Q8WV44 630 aa20.62■□□□□ 0.89
CCDC197-203ENST00000449472 FBLN2P98095 1184 aa20.54■□□□□ 0.88
CCDC197-203ENST00000449472 CHD1O14646 1710 aa20.48■□□□□ 0.87
CCDC197-203ENST00000449472 SNAPC4Q5SXM2 1469 aa20.43■□□□□ 0.86
CCDC197-203ENST00000449472 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
CCDC197-203ENST00000449472 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
CCDC197-203ENST00000449472 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
CCDC197-203ENST00000449472 RIMBP3CA6NJZ7 1639 aa20.41■□□□□ 0.86
CCDC197-203ENST00000449472 RIMBP3BA6NNM3 1639 aa20.41■□□□□ 0.86
CCDC197-203ENST00000449472 RIMBP3Q9UFD9 1639 aa20.41■□□□□ 0.86
CCDC197-203ENST00000449472 CHMP7Q8WUX9 453 aaPredicted RBP20.4■□□□□ 0.86
CCDC197-203ENST00000449472 GAPVD1Q14C86 1478 aa20.39■□□□□ 0.85
CCDC197-203ENST00000449472 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
CCDC197-203ENST00000449472 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
CCDC197-203ENST00000449472 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
CCDC197-203ENST00000449472 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
CCDC197-203ENST00000449472 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
CCDC197-203ENST00000449472 MAGI1Q96QZ7 1491 aaPredicted RBP20.35■□□□□ 0.85
CCDC197-203ENST00000449472 PBRM1Q86U86 1689 aa20.33■□□□□ 0.85
CCDC197-203ENST00000449472 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
CCDC197-203ENST00000449472 CYB5RLQ6IPT4 315 aa20.31■□□□□ 0.84
CCDC197-203ENST00000449472 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
CCDC197-203ENST00000449472 CLASP1Q7Z460 1538 aa20.23■□□□□ 0.83
CCDC197-203ENST00000449472 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
CCDC197-203ENST00000449472 GRIN2AQ12879 1464 aa20.14■□□□□ 0.81
CCDC197-203ENST00000449472 ADAMTS12P58397 1594 aa20.13■□□□□ 0.81
CCDC197-203ENST00000449472 FHAD1B1AJZ9 1412 aa20.12■□□□□ 0.81
CCDC197-203ENST00000449472 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
CCDC197-203ENST00000449472 CEP170Q5SW79 1584 aa20.07■□□□□ 0.8
CCDC197-203ENST00000449472 NUP160Q12769 1436 aa20.06■□□□□ 0.8
CCDC197-203ENST00000449472 IGF1RP08069 1367 aa20.02■□□□□ 0.8
CCDC197-203ENST00000449472 ERCC6L2Q5T890 1561 aa20.01■□□□□ 0.79
CCDC197-203ENST00000449472 KIF27Q86VH2 1401 aa20.01■□□□□ 0.79
CCDC197-203ENST00000449472 TRHP20396 242 aaPredicted RBP19.98■□□□□ 0.79
CCDC197-203ENST00000449472 JPH4Q96JJ6 628 aa19.95■□□□□ 0.78
CCDC197-203ENST00000449472 SHROOM2Q13796 1616 aa19.93■□□□□ 0.78
CCDC197-203ENST00000449472 PRG4Q92954 1404 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms