RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
LINC02561-201ENST00000449457 CHIC1Q5VXU3 224 aa26.33■■□□□ 1.81
LINC02561-201ENST00000449457 NISCHQ9Y2I1 1504 aa25.49■■□□□ 1.67
LINC02561-201ENST00000449457 ABCC9O60706 1549 aa23.56■■□□□ 1.36
LINC02561-201ENST00000449457 PHF23Q9BUL5 403 aaPredicted RBP23.26■■□□□ 1.31
LINC02561-201ENST00000449457 CCDC180Q9P1Z9 1646 aa22.99■■□□□ 1.27
LINC02561-201ENST00000449457 DNAJC5BQ9UF47 199 aa22.44■■□□□ 1.18
LINC02561-201ENST00000449457 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
LINC02561-201ENST00000449457 RB1CC1Q8TDY2 1594 aa22.07■■□□□ 1.12
LINC02561-201ENST00000449457 PABPN1Q86U42 306 aaKnown RBP eCLIP21.89■■□□□ 1.09
LINC02561-201ENST00000449457 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
LINC02561-201ENST00000449457 NACADO15069 1562 aa21.78■■□□□ 1.08
LINC02561-201ENST00000449457 UNC13AQ9UPW8 1703 aa21.76■■□□□ 1.07
LINC02561-201ENST00000449457 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
LINC02561-201ENST00000449457 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
LINC02561-201ENST00000449457 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
LINC02561-201ENST00000449457 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
LINC02561-201ENST00000449457 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
LINC02561-201ENST00000449457 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
LINC02561-201ENST00000449457 ZCCHC6Q5VYS8 1495 aaKnown RBP21.08■□□□□ 0.97
LINC02561-201ENST00000449457 EIF4G1Q04637 1599 aaKnown RBP21.03■□□□□ 0.96
LINC02561-201ENST00000449457 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
LINC02561-201ENST00000449457 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
LINC02561-201ENST00000449457 FOXD1Q16676 465 aa20.83■□□□□ 0.93
LINC02561-201ENST00000449457 POTEDQ86YR6 584 aa20.76■□□□□ 0.91
LINC02561-201ENST00000449457 DNAJC5Q9H3Z4 198 aa20.67■□□□□ 0.9
LINC02561-201ENST00000449457 ADRA2BP18089 450 aa20.41■□□□□ 0.86
LINC02561-201ENST00000449457 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
LINC02561-201ENST00000449457 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
LINC02561-201ENST00000449457 CUX2O14529 1486 aa20.25■□□□□ 0.83
LINC02561-201ENST00000449457 NESP48681 1621 aa20.17■□□□□ 0.82
LINC02561-201ENST00000449457 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
LINC02561-201ENST00000449457 ATAD2BQ9ULI0 1458 aa20.1■□□□□ 0.81
LINC02561-201ENST00000449457 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
LINC02561-201ENST00000449457 THOC2Q8NI27 1593 aaKnown RBP19.98■□□□□ 0.79
LINC02561-201ENST00000449457 HMGXB3Q12766 1538 aa19.97■□□□□ 0.79
LINC02561-201ENST00000449457 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
LINC02561-201ENST00000449457 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
LINC02561-201ENST00000449457 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
LINC02561-201ENST00000449457 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
LINC02561-201ENST00000449457 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
LINC02561-201ENST00000449457 MROH2BQ7Z745 1585 aa19.75■□□□□ 0.75
LINC02561-201ENST00000449457 LAMC3Q9Y6N6 1575 aa19.75■□□□□ 0.75
LINC02561-201ENST00000449457 PIAS4Q8N2W9 510 aaPredicted RBP19.73■□□□□ 0.75
LINC02561-201ENST00000449457 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
LINC02561-201ENST00000449457 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
LINC02561-201ENST00000449457 MSH5O43196 834 aa19.57■□□□□ 0.72
LINC02561-201ENST00000449457 MRC2Q9UBG0 1479 aa19.56■□□□□ 0.72
LINC02561-201ENST00000449457 WIZO95785 1651 aa19.54■□□□□ 0.72
LINC02561-201ENST00000449457 WDR62O43379 1518 aa19.53■□□□□ 0.72
LINC02561-201ENST00000449457 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
LINC02561-201ENST00000449457 CEP164Q9UPV0 1460 aa19.41■□□□□ 0.7
LINC02561-201ENST00000449457 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
LINC02561-201ENST00000449457 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
LINC02561-201ENST00000449457 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
LINC02561-201ENST00000449457 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
LINC02561-201ENST00000449457 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
LINC02561-201ENST00000449457 OSCARQ8IYS5 282 aa19.23■□□□□ 0.67
LINC02561-201ENST00000449457 CFTRP13569 1480 aa19.22■□□□□ 0.67
LINC02561-201ENST00000449457 ZNF608Q9ULD9 1512 aaPredicted RBP19.17■□□□□ 0.66
LINC02561-201ENST00000449457 KCNA4P22459 653 aa19.15■□□□□ 0.66
LINC02561-201ENST00000449457 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
LINC02561-201ENST00000449457 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
LINC02561-201ENST00000449457 ARHGEF11O15085 1522 aa19.09■□□□□ 0.65
LINC02561-201ENST00000449457 PPP4R3CPQ6ZMV5 832 aa19.07■□□□□ 0.64
LINC02561-201ENST00000449457 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
LINC02561-201ENST00000449457 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.63
LINC02561-201ENST00000449457 IFT140Q96RY7 1462 aa18.98■□□□□ 0.63
LINC02561-201ENST00000449457 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
LINC02561-201ENST00000449457 CHD1O14646 1710 aa18.97■□□□□ 0.63
LINC02561-201ENST00000449457 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
LINC02561-201ENST00000449457 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
LINC02561-201ENST00000449457 ARAP1Q96P48 1450 aa18.92■□□□□ 0.62
LINC02561-201ENST00000449457 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.62
LINC02561-201ENST00000449457 TRHP20396 242 aaPredicted RBP18.87■□□□□ 0.61
LINC02561-201ENST00000449457 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
LINC02561-201ENST00000449457 FBLN2P98095 1184 aa18.85■□□□□ 0.61
LINC02561-201ENST00000449457 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
LINC02561-201ENST00000449457 RAD54L2Q9Y4B4 1467 aa18.79■□□□□ 0.6
LINC02561-201ENST00000449457 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
LINC02561-201ENST00000449457 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
LINC02561-201ENST00000449457 TDRD9Q8NDG6 1382 aaKnown RBP18.71■□□□□ 0.59
LINC02561-201ENST00000449457 ABCC8Q09428 1581 aa18.69■□□□□ 0.58
LINC02561-201ENST00000449457 CLASP1Q7Z460 1538 aa18.67■□□□□ 0.58
LINC02561-201ENST00000449457 NCBP3Q53F19 620 aaKnown RBP18.64■□□□□ 0.57
LINC02561-201ENST00000449457 FGD5Q6ZNL6 1462 aa18.63■□□□□ 0.57
LINC02561-201ENST00000449457 SOGA1O94964 1423 aa18.62■□□□□ 0.57
LINC02561-201ENST00000449457 CUX1P39880 1505 aa18.58■□□□□ 0.56
LINC02561-201ENST00000449457 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
LINC02561-201ENST00000449457 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
LINC02561-201ENST00000449457 CHMP7Q8WUX9 453 aaPredicted RBP18.53■□□□□ 0.56
LINC02561-201ENST00000449457 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
LINC02561-201ENST00000449457 PBRM1Q86U86 1689 aa18.52■□□□□ 0.56
LINC02561-201ENST00000449457 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
LINC02561-201ENST00000449457 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
LINC02561-201ENST00000449457 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
LINC02561-201ENST00000449457 SYNJ2O15056 1496 aa18.47■□□□□ 0.55
LINC02561-201ENST00000449457 GAPVD1Q14C86 1478 aa18.47■□□□□ 0.55
LINC02561-201ENST00000449457 NPM3O75607 178 aaKnown RBP18.43■□□□□ 0.54
LINC02561-201ENST00000449457 MAPK8IP2Q13387 824 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms