RNA–Protein interactions for RNA: ENST00000449440.5

LRRC8B-204, Transcript of leucine rich repeat containing 8 VRAC subunit B, humanhuman

TSL 3

Gene LRRC8B, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8B-204ENST00000449440 NISCHQ9Y2I1 1504 aa59.29■■■■■ 7.08
LRRC8B-204ENST00000449440 CCDC180Q9P1Z9 1646 aa52.51■■■■■ 6
LRRC8B-204ENST00000449440 ABCC9O60706 1549 aa52.35■■■■■ 5.97
LRRC8B-204ENST00000449440 DCAF8L2P0C7V8 631 aa49.65■■■■■ 5.54
LRRC8B-204ENST00000449440 RB1CC1Q8TDY2 1594 aa49.58■■■■■ 5.53
LRRC8B-204ENST00000449440 ZCCHC6Q5VYS8 1495 aaKnown RBP49.4■■■■■ 5.5
LRRC8B-204ENST00000449440 NACADO15069 1562 aa49.4■■■■■ 5.5
LRRC8B-204ENST00000449440 DNAJC5BQ9UF47 199 aa49.38■■■■■ 5.5
LRRC8B-204ENST00000449440 MYO15BQ96JP2 1530 aa49.1■■■■■ 5.45
LRRC8B-204ENST00000449440 DCAF1Q9Y4B6 1507 aa48.99■■■■■ 5.43
LRRC8B-204ENST00000449440 PABPN1Q86U42 306 aaKnown RBP eCLIP48.77■■■■■ 5.4
LRRC8B-204ENST00000449440 UNC13AQ9UPW8 1703 aa48.52■■■■■ 5.36
LRRC8B-204ENST00000449440 BICRAQ9NZM4 1560 aa48.22■■■■■ 5.31
LRRC8B-204ENST00000449440 SCRIBQ14160 1630 aa48.07■■■■■ 5.29
LRRC8B-204ENST00000449440 SHROOM4Q9ULL8 1493 aa47.36■■■■■ 5.17
LRRC8B-204ENST00000449440 CC2D2AQ9P2K1 1620 aa47.21■■■■■ 5.15
LRRC8B-204ENST00000449440 CECR2Q9BXF3 1484 aa47.13■■■■■ 5.13
LRRC8B-204ENST00000449440 EIF4G1Q04637 1599 aaKnown RBP47.04■■■■■ 5.12
LRRC8B-204ENST00000449440 SMARCA4P51532 1647 aa45.95■■■■■ 4.95
LRRC8B-204ENST00000449440 BAZ1AQ9NRL2 1556 aaPredicted RBP45.9■■■■■ 4.94
LRRC8B-204ENST00000449440 MROH2BQ7Z745 1585 aa45.75■■■■■ 4.91
LRRC8B-204ENST00000449440 ATAD2BQ9ULI0 1458 aa45.71■■■■■ 4.91
LRRC8B-204ENST00000449440 NCAPD3P42695 1498 aa45.63■■■■■ 4.9
LRRC8B-204ENST00000449440 SMARCA2P51531 1590 aa45.58■■■■■ 4.89
LRRC8B-204ENST00000449440 PEG3Q9GZU2 1588 aa45.45■■■■■ 4.87
LRRC8B-204ENST00000449440 DNAJC5Q9H3Z4 198 aa45.39■■■■■ 4.86
LRRC8B-204ENST00000449440 HMGXB3Q12766 1538 aa45.36■■■■■ 4.85
LRRC8B-204ENST00000449440 BAZ1BQ9UIG0 1483 aaKnown RBP45.32■■■■■ 4.85
LRRC8B-204ENST00000449440 RSF1Q96T23 1441 aaPredicted RBP45.28■■■■■ 4.84
LRRC8B-204ENST00000449440 WIZO95785 1651 aa45.24■■■■■ 4.83
LRRC8B-204ENST00000449440 ERCC6Q03468 1493 aa45.17■■■■■ 4.82
LRRC8B-204ENST00000449440 CUX2O14529 1486 aa45.07■■■■■ 4.81
LRRC8B-204ENST00000449440 NESP48681 1621 aa44.93■■■■■ 4.78
LRRC8B-204ENST00000449440 TOP2AP11388 1531 aaKnown RBP44.72■■■■■ 4.75
LRRC8B-204ENST00000449440 THOC2Q8NI27 1593 aaKnown RBP44.42■■■■■ 4.7
LRRC8B-204ENST00000449440 LAMC3Q9Y6N6 1575 aa44.42■■■■■ 4.7
LRRC8B-204ENST00000449440 SUPT5HO00267 1087 aaKnown RBP44.36■■■■■ 4.69
LRRC8B-204ENST00000449440 CADPSQ9ULU8 1353 aa44.34■■■■■ 4.69
LRRC8B-204ENST00000449440 CCDC88BA6NC98 1476 aa44.27■■■■■ 4.68
LRRC8B-204ENST00000449440 KIF21AQ7Z4S6 1674 aa44.26■■■■■ 4.68
LRRC8B-204ENST00000449440 PDS5BQ9NTI5 1447 aa44.19■■■■■ 4.66
LRRC8B-204ENST00000449440 CFTRP13569 1480 aa44.08■■■■■ 4.65
LRRC8B-204ENST00000449440 MRC2Q9UBG0 1479 aa43.86■■■■■ 4.61
LRRC8B-204ENST00000449440 FANCD2Q9BXW9 1451 aa43.83■■■■■ 4.61
LRRC8B-204ENST00000449440 WDR62O43379 1518 aa43.73■■■■■ 4.59
LRRC8B-204ENST00000449440 CEP164Q9UPV0 1460 aa43.73■■■■■ 4.59
LRRC8B-204ENST00000449440 PRDM2Q13029 1718 aa43.62■■■■■ 4.57
LRRC8B-204ENST00000449440 TRIM41Q8WV44 630 aa43.44■■■■■ 4.54
LRRC8B-204ENST00000449440 URB2Q14146 1524 aaKnown RBP43.39■■■■■ 4.54
LRRC8B-204ENST00000449440 TOPBP1Q92547 1522 aa43.14■■■■■ 4.5
LRRC8B-204ENST00000449440 ABCC8Q09428 1581 aa43.07■■■■■ 4.48
LRRC8B-204ENST00000449440 DNMBPQ6XZF7 1577 aa43.06■■■■■ 4.48
LRRC8B-204ENST00000449440 OSCARQ8IYS5 282 aa43.05■■■■■ 4.48
LRRC8B-204ENST00000449440 CUX1P39880 1505 aa42.89■■■■■ 4.46
LRRC8B-204ENST00000449440 ZNF608Q9ULD9 1512 aaPredicted RBP42.82■■■■■ 4.45
LRRC8B-204ENST00000449440 IFT140Q96RY7 1462 aa42.81■■■■■ 4.44
LRRC8B-204ENST00000449440 POLA1P09884 1462 aaPredicted RBP42.79■■■■■ 4.44
LRRC8B-204ENST00000449440 FGD5Q6ZNL6 1462 aa42.71■■■■■ 4.43
LRRC8B-204ENST00000449440 RAD54L2Q9Y4B4 1467 aa42.67■■■■■ 4.42
LRRC8B-204ENST00000449440 WRNQ14191 1432 aaPredicted RBP eCLIP42.66■■■■■ 4.42
LRRC8B-204ENST00000449440 SOGA1O94964 1423 aa42.64■■■■■ 4.42
LRRC8B-204ENST00000449440 TARBP1Q13395 1621 aaKnown RBP42.63■■■■■ 4.41
LRRC8B-204ENST00000449440 SYNJ1O43426 1573 aa42.55■■■■■ 4.4
LRRC8B-204ENST00000449440 RIMBP3CA6NJZ7 1639 aa42.53■■■■■ 4.4
LRRC8B-204ENST00000449440 RIMBP3BA6NNM3 1639 aa42.53■■■■■ 4.4
LRRC8B-204ENST00000449440 RIMBP3Q9UFD9 1639 aa42.53■■■■■ 4.4
LRRC8B-204ENST00000449440 TOP2BQ02880 1626 aa42.5■■■■■ 4.39
LRRC8B-204ENST00000449440 EIF4G3O43432 1585 aaKnown RBP42.5■■■■■ 4.39
LRRC8B-204ENST00000449440 BIVM-ERCC5R4GMW8 1640 aa42.47■■■■■ 4.39
LRRC8B-204ENST00000449440 AQRO60306 1485 aaKnown RBP eCLIP42.47■■■■■ 4.39
LRRC8B-204ENST00000449440 TDRD9Q8NDG6 1382 aaKnown RBP42.43■■■■■ 4.38
LRRC8B-204ENST00000449440 ARHGEF11O15085 1522 aa42.36■■■■■ 4.37
LRRC8B-204ENST00000449440 ABCA10Q8WWZ4 1543 aa42.27■■■■■ 4.36
LRRC8B-204ENST00000449440 WDR97A6NE52 1622 aa42.27■■■■■ 4.36
LRRC8B-204ENST00000449440 CHD1O14646 1710 aa42.23■■■■■ 4.35
LRRC8B-204ENST00000449440 FBLN2P98095 1184 aa42.21■■■■■ 4.35
LRRC8B-204ENST00000449440 CYB5RLQ6IPT4 315 aa42.15■■■■■ 4.34
LRRC8B-204ENST00000449440 GAPVD1Q14C86 1478 aa42.12■■■■■ 4.33
LRRC8B-204ENST00000449440 GRIN2BQ13224 1484 aa42.08■■■■■ 4.33
LRRC8B-204ENST00000449440 ABCA5Q8WWZ7 1642 aa42.06■■■■■ 4.32
LRRC8B-204ENST00000449440 SNAPC4Q5SXM2 1469 aa42.03■■■■■ 4.32
LRRC8B-204ENST00000449440 ARAP1Q96P48 1450 aa41.96■■■■■ 4.31
LRRC8B-204ENST00000449440 PBRM1Q86U86 1689 aa41.96■■■■■ 4.31
LRRC8B-204ENST00000449440 MAGI1Q96QZ7 1491 aaPredicted RBP41.92■■■■■ 4.3
LRRC8B-204ENST00000449440 CHMP7Q8WUX9 453 aaPredicted RBP41.83■■■■■ 4.29
LRRC8B-204ENST00000449440 SYNJ2O15056 1496 aa41.79■■■■■ 4.28
LRRC8B-204ENST00000449440 TRHP20396 242 aaPredicted RBP41.75■■■■■ 4.27
LRRC8B-204ENST00000449440 KIF27Q86VH2 1401 aa41.75■■■■■ 4.27
LRRC8B-204ENST00000449440 ERICH3Q5RHP9 1530 aa41.74■■■■■ 4.27
LRRC8B-204ENST00000449440 CLASP1Q7Z460 1538 aa41.72■■■■■ 4.27
LRRC8B-204ENST00000449440 ADAMTS12P58397 1594 aa41.66■■■■■ 4.26
LRRC8B-204ENST00000449440 FHAD1B1AJZ9 1412 aa41.63■■■■■ 4.26
LRRC8B-204ENST00000449440 IGF1RP08069 1367 aa41.63■■■■■ 4.25
LRRC8B-204ENST00000449440 GRIN2AQ12879 1464 aa41.54■■■■■ 4.24
LRRC8B-204ENST00000449440 RUSC2Q8N2Y8 1516 aa41.53■■■■■ 4.24
LRRC8B-204ENST00000449440 CHIC1Q5VXU3 224 aa41.46■■■■■ 4.23
LRRC8B-204ENST00000449440 CARMIL1Q5VZK9 1371 aa41.37■■■■■ 4.21
LRRC8B-204ENST00000449440 CUL7Q14999 1698 aa41.36■■■■■ 4.21
LRRC8B-204ENST00000449440 NUP160Q12769 1436 aa41.35■■■■■ 4.21
LRRC8B-204ENST00000449440 CEP170Q5SW79 1584 aa41.33■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms