RNA–Protein interactions for RNA: ENST00000449405.1

LINC01939-202, Transcript of long intergenic non-protein coding RNA 1939, humanhuman

TSL 3

Gene LINC01939, Length 368 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01939-202ENST00000449405 NISCHQ9Y2I1 1504 aa38.72■■■■□ 3.79
LINC01939-202ENST00000449405 ABCC9O60706 1549 aa35.06■■■■□ 3.2
LINC01939-202ENST00000449405 CCDC180Q9P1Z9 1646 aa34.73■■■■□ 3.15
LINC01939-202ENST00000449405 DNAJC5BQ9UF47 199 aa33.28■■■□□ 2.92
LINC01939-202ENST00000449405 RB1CC1Q8TDY2 1594 aa33.22■■■□□ 2.91
LINC01939-202ENST00000449405 NACADO15069 1562 aa32.96■■■□□ 2.87
LINC01939-202ENST00000449405 DCAF8L2P0C7V8 631 aa32.86■■■□□ 2.85
LINC01939-202ENST00000449405 PABPN1Q86U42 306 aaKnown RBP eCLIP32.7■■■□□ 2.83
LINC01939-202ENST00000449405 UNC13AQ9UPW8 1703 aa32.47■■■□□ 2.79
LINC01939-202ENST00000449405 MYO15BQ96JP2 1530 aa32.45■■■□□ 2.78
LINC01939-202ENST00000449405 BICRAQ9NZM4 1560 aa32.32■■■□□ 2.77
LINC01939-202ENST00000449405 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
LINC01939-202ENST00000449405 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.7
LINC01939-202ENST00000449405 SHROOM4Q9ULL8 1493 aa31.78■■■□□ 2.68
LINC01939-202ENST00000449405 SCRIBQ14160 1630 aa31.66■■■□□ 2.66
LINC01939-202ENST00000449405 CC2D2AQ9P2K1 1620 aa31.65■■■□□ 2.66
LINC01939-202ENST00000449405 CECR2Q9BXF3 1484 aa31.61■■■□□ 2.65
LINC01939-202ENST00000449405 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.64
LINC01939-202ENST00000449405 DNAJC5Q9H3Z4 198 aa30.69■■■□□ 2.5
LINC01939-202ENST00000449405 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
LINC01939-202ENST00000449405 ATAD2BQ9ULI0 1458 aa30.36■■■□□ 2.45
LINC01939-202ENST00000449405 CUX2O14529 1486 aa30.29■■■□□ 2.44
LINC01939-202ENST00000449405 ERCC6Q03468 1493 aa30.24■■■□□ 2.43
LINC01939-202ENST00000449405 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
LINC01939-202ENST00000449405 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
LINC01939-202ENST00000449405 HMGXB3Q12766 1538 aa30.16■■■□□ 2.42
LINC01939-202ENST00000449405 NESP48681 1621 aa30.08■■■□□ 2.41
LINC01939-202ENST00000449405 BAZ1AQ9NRL2 1556 aaPredicted RBP30.02■■■□□ 2.4
LINC01939-202ENST00000449405 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
LINC01939-202ENST00000449405 PEG3Q9GZU2 1588 aa29.93■■■□□ 2.38
LINC01939-202ENST00000449405 MROH2BQ7Z745 1585 aa29.84■■■□□ 2.37
LINC01939-202ENST00000449405 LAMC3Q9Y6N6 1575 aa29.77■■■□□ 2.36
LINC01939-202ENST00000449405 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
LINC01939-202ENST00000449405 PDS5BQ9NTI5 1447 aa29.65■■■□□ 2.34
LINC01939-202ENST00000449405 KIF21AQ7Z4S6 1674 aa29.6■■■□□ 2.33
LINC01939-202ENST00000449405 CADPSQ9ULU8 1353 aa29.57■■■□□ 2.32
LINC01939-202ENST00000449405 WIZO95785 1651 aa29.44■■■□□ 2.3
LINC01939-202ENST00000449405 MRC2Q9UBG0 1479 aa29.37■■■□□ 2.29
LINC01939-202ENST00000449405 WDR62O43379 1518 aa29.3■■■□□ 2.28
LINC01939-202ENST00000449405 CEP164Q9UPV0 1460 aa29.19■■■□□ 2.26
LINC01939-202ENST00000449405 FANCD2Q9BXW9 1451 aa29.18■■■□□ 2.26
LINC01939-202ENST00000449405 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
LINC01939-202ENST00000449405 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
LINC01939-202ENST00000449405 CFTRP13569 1480 aa29.16■■■□□ 2.26
LINC01939-202ENST00000449405 TOP2AP11388 1531 aaKnown RBP29.01■■■□□ 2.23
LINC01939-202ENST00000449405 OSCARQ8IYS5 282 aa28.98■■■□□ 2.23
LINC01939-202ENST00000449405 URB2Q14146 1524 aaKnown RBP28.97■■■□□ 2.23
LINC01939-202ENST00000449405 CCDC88BA6NC98 1476 aa28.78■■■□□ 2.2
LINC01939-202ENST00000449405 PRDM2Q13029 1718 aa28.71■■■□□ 2.19
LINC01939-202ENST00000449405 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
LINC01939-202ENST00000449405 IFT140Q96RY7 1462 aa28.65■■■□□ 2.18
LINC01939-202ENST00000449405 TOPBP1Q92547 1522 aa28.6■■■□□ 2.17
LINC01939-202ENST00000449405 ABCC8Q09428 1581 aa28.52■■■□□ 2.16
LINC01939-202ENST00000449405 RIMBP3CA6NJZ7 1639 aa28.51■■■□□ 2.15
LINC01939-202ENST00000449405 RIMBP3BA6NNM3 1639 aa28.51■■■□□ 2.15
LINC01939-202ENST00000449405 RIMBP3Q9UFD9 1639 aa28.51■■■□□ 2.15
LINC01939-202ENST00000449405 DNMBPQ6XZF7 1577 aa28.43■■■□□ 2.14
LINC01939-202ENST00000449405 ARHGEF11O15085 1522 aa28.41■■■□□ 2.14
LINC01939-202ENST00000449405 AQRO60306 1485 aaKnown RBP eCLIP28.4■■■□□ 2.14
LINC01939-202ENST00000449405 EIF4G3O43432 1585 aaKnown RBP28.39■■■□□ 2.14
LINC01939-202ENST00000449405 TARBP1Q13395 1621 aaKnown RBP28.36■■■□□ 2.13
LINC01939-202ENST00000449405 CYB5RLQ6IPT4 315 aa28.32■■■□□ 2.12
LINC01939-202ENST00000449405 POLA1P09884 1462 aaPredicted RBP28.29■■■□□ 2.12
LINC01939-202ENST00000449405 FBLN2P98095 1184 aa28.26■■■□□ 2.11
LINC01939-202ENST00000449405 RAD54L2Q9Y4B4 1467 aa28.24■■■□□ 2.11
LINC01939-202ENST00000449405 CHD1O14646 1710 aa28.23■■■□□ 2.11
LINC01939-202ENST00000449405 SOGA1O94964 1423 aa28.21■■■□□ 2.11
LINC01939-202ENST00000449405 TDRD9Q8NDG6 1382 aaKnown RBP28.2■■■□□ 2.1
LINC01939-202ENST00000449405 ARAP1Q96P48 1450 aa28.13■■■□□ 2.09
LINC01939-202ENST00000449405 FGD5Q6ZNL6 1462 aa28.08■■■□□ 2.09
LINC01939-202ENST00000449405 CUX1P39880 1505 aa28.03■■■□□ 2.08
LINC01939-202ENST00000449405 SNAPC4Q5SXM2 1469 aa28.03■■■□□ 2.08
LINC01939-202ENST00000449405 TRHP20396 242 aaPredicted RBP28.03■■■□□ 2.08
LINC01939-202ENST00000449405 CHMP7Q8WUX9 453 aaPredicted RBP28.02■■■□□ 2.08
LINC01939-202ENST00000449405 WDR97A6NE52 1622 aa27.99■■■□□ 2.07
LINC01939-202ENST00000449405 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
LINC01939-202ENST00000449405 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.06
LINC01939-202ENST00000449405 GRIN2BQ13224 1484 aa27.94■■■□□ 2.06
LINC01939-202ENST00000449405 SYNJ1O43426 1573 aa27.87■■■□□ 2.05
LINC01939-202ENST00000449405 SYNJ2O15056 1496 aa27.87■■■□□ 2.05
LINC01939-202ENST00000449405 GAPVD1Q14C86 1478 aa27.83■■■□□ 2.04
LINC01939-202ENST00000449405 ABCA10Q8WWZ4 1543 aa27.76■■■□□ 2.03
LINC01939-202ENST00000449405 PBRM1Q86U86 1689 aa27.73■■■□□ 2.03
LINC01939-202ENST00000449405 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
LINC01939-202ENST00000449405 ABCA5Q8WWZ7 1642 aa27.69■■■□□ 2.02
LINC01939-202ENST00000449405 WRNQ14191 1432 aaPredicted RBP eCLIP27.6■■■□□ 2.01
LINC01939-202ENST00000449405 GRIN2AQ12879 1464 aa27.57■■■□□ 2
LINC01939-202ENST00000449405 ERCC6L2Q5T890 1561 aa27.54■■■□□ 2
LINC01939-202ENST00000449405 NUP160Q12769 1436 aa27.52■■■□□ 2
LINC01939-202ENST00000449405 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
LINC01939-202ENST00000449405 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
LINC01939-202ENST00000449405 CEP170Q5SW79 1584 aa27.48■■□□□ 1.99
LINC01939-202ENST00000449405 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
LINC01939-202ENST00000449405 FHAD1B1AJZ9 1412 aa27.46■■□□□ 1.99
LINC01939-202ENST00000449405 SHROOM2Q13796 1616 aa27.38■■□□□ 1.97
LINC01939-202ENST00000449405 ERICH3Q5RHP9 1530 aa27.38■■□□□ 1.97
LINC01939-202ENST00000449405 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
LINC01939-202ENST00000449405 JPH4Q96JJ6 628 aa27.33■■□□□ 1.97
LINC01939-202ENST00000449405 PRG4Q92954 1404 aaPredicted RBP27.28■■□□□ 1.96
LINC01939-202ENST00000449405 KIF13AQ9H1H9 1805 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms