RNA–Protein interactions for RNA: ENST00000449304.5

SCUBE1-203, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 5

Gene SCUBE1, Length 524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-203ENST00000449304 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.57
SCUBE1-203ENST00000449304 CCDC180Q9P1Z9 1646 aa22.34■■□□□ 1.17
SCUBE1-203ENST00000449304 ABCC9O60706 1549 aa22.14■■□□□ 1.13
SCUBE1-203ENST00000449304 RB1CC1Q8TDY2 1594 aa21.18■□□□□ 0.98
SCUBE1-203ENST00000449304 NACADO15069 1562 aa21.07■□□□□ 0.96
SCUBE1-203ENST00000449304 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
SCUBE1-203ENST00000449304 UNC13AQ9UPW8 1703 aa20.75■□□□□ 0.91
SCUBE1-203ENST00000449304 DNAJC5BQ9UF47 199 aa20.74■□□□□ 0.91
SCUBE1-203ENST00000449304 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
SCUBE1-203ENST00000449304 ZCCHC6Q5VYS8 1495 aaKnown RBP20.62■□□□□ 0.89
SCUBE1-203ENST00000449304 BICRAQ9NZM4 1560 aa20.59■□□□□ 0.89
SCUBE1-203ENST00000449304 DCAF1Q9Y4B6 1507 aa20.59■□□□□ 0.89
SCUBE1-203ENST00000449304 PABPN1Q86U42 306 aaKnown RBP eCLIP20.56■□□□□ 0.88
SCUBE1-203ENST00000449304 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
SCUBE1-203ENST00000449304 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
SCUBE1-203ENST00000449304 CC2D2AQ9P2K1 1620 aa20.07■□□□□ 0.8
SCUBE1-203ENST00000449304 EIF4G1Q04637 1599 aaKnown RBP20.05■□□□□ 0.8
SCUBE1-203ENST00000449304 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
SCUBE1-203ENST00000449304 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
SCUBE1-203ENST00000449304 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
SCUBE1-203ENST00000449304 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
SCUBE1-203ENST00000449304 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
SCUBE1-203ENST00000449304 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
SCUBE1-203ENST00000449304 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.68
SCUBE1-203ENST00000449304 PEG3Q9GZU2 1588 aa19.25■□□□□ 0.67
SCUBE1-203ENST00000449304 CUX2O14529 1486 aa19.16■□□□□ 0.66
SCUBE1-203ENST00000449304 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
SCUBE1-203ENST00000449304 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
SCUBE1-203ENST00000449304 ERCC6Q03468 1493 aa19.1■□□□□ 0.65
SCUBE1-203ENST00000449304 NESP48681 1621 aa19.05■□□□□ 0.64
SCUBE1-203ENST00000449304 DNAJC5Q9H3Z4 198 aa19.04■□□□□ 0.64
SCUBE1-203ENST00000449304 LAMC3Q9Y6N6 1575 aa19■□□□□ 0.63
SCUBE1-203ENST00000449304 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
SCUBE1-203ENST00000449304 WIZO95785 1651 aa18.88■□□□□ 0.61
SCUBE1-203ENST00000449304 KIF21AQ7Z4S6 1674 aa18.86■□□□□ 0.61
SCUBE1-203ENST00000449304 PDS5BQ9NTI5 1447 aa18.83■□□□□ 0.61
SCUBE1-203ENST00000449304 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
SCUBE1-203ENST00000449304 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
SCUBE1-203ENST00000449304 MRC2Q9UBG0 1479 aa18.69■□□□□ 0.58
SCUBE1-203ENST00000449304 WDR62O43379 1518 aa18.69■□□□□ 0.58
SCUBE1-203ENST00000449304 TOP2AP11388 1531 aaKnown RBP18.68■□□□□ 0.58
SCUBE1-203ENST00000449304 CFTRP13569 1480 aa18.64■□□□□ 0.57
SCUBE1-203ENST00000449304 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
SCUBE1-203ENST00000449304 FANCD2Q9BXW9 1451 aa18.58■□□□□ 0.57
SCUBE1-203ENST00000449304 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
SCUBE1-203ENST00000449304 URB2Q14146 1524 aaKnown RBP18.45■□□□□ 0.54
SCUBE1-203ENST00000449304 CCDC88BA6NC98 1476 aa18.43■□□□□ 0.54
SCUBE1-203ENST00000449304 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
SCUBE1-203ENST00000449304 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
SCUBE1-203ENST00000449304 ABCC8Q09428 1581 aa18.24■□□□□ 0.51
SCUBE1-203ENST00000449304 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
SCUBE1-203ENST00000449304 ZNF608Q9ULD9 1512 aaPredicted RBP18.19■□□□□ 0.5
SCUBE1-203ENST00000449304 OSCARQ8IYS5 282 aa18.19■□□□□ 0.5
SCUBE1-203ENST00000449304 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
SCUBE1-203ENST00000449304 TARBP1Q13395 1621 aaKnown RBP18.13■□□□□ 0.49
SCUBE1-203ENST00000449304 TRIM41Q8WV44 630 aa18.08■□□□□ 0.48
SCUBE1-203ENST00000449304 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
SCUBE1-203ENST00000449304 RIMBP3CA6NJZ7 1639 aa18.02■□□□□ 0.48
SCUBE1-203ENST00000449304 RIMBP3BA6NNM3 1639 aa18.02■□□□□ 0.48
SCUBE1-203ENST00000449304 RIMBP3Q9UFD9 1639 aa18.02■□□□□ 0.48
SCUBE1-203ENST00000449304 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
SCUBE1-203ENST00000449304 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.47
SCUBE1-203ENST00000449304 CHD1O14646 1710 aa18■□□□□ 0.47
SCUBE1-203ENST00000449304 RAD54L2Q9Y4B4 1467 aa17.96■□□□□ 0.47
SCUBE1-203ENST00000449304 ARHGEF11O15085 1522 aa17.96■□□□□ 0.47
SCUBE1-203ENST00000449304 CUX1P39880 1505 aa17.96■□□□□ 0.47
SCUBE1-203ENST00000449304 SOGA1O94964 1423 aa17.95■□□□□ 0.46
SCUBE1-203ENST00000449304 FGD5Q6ZNL6 1462 aa17.95■□□□□ 0.46
SCUBE1-203ENST00000449304 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
SCUBE1-203ENST00000449304 MAGI1Q96QZ7 1491 aaPredicted RBP17.85■□□□□ 0.45
SCUBE1-203ENST00000449304 SNAPC4Q5SXM2 1469 aa17.84■□□□□ 0.45
SCUBE1-203ENST00000449304 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
SCUBE1-203ENST00000449304 CLASP1Q7Z460 1538 aa17.82■□□□□ 0.44
SCUBE1-203ENST00000449304 PBRM1Q86U86 1689 aa17.8■□□□□ 0.44
SCUBE1-203ENST00000449304 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
SCUBE1-203ENST00000449304 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
SCUBE1-203ENST00000449304 ABCA5Q8WWZ7 1642 aa17.79■□□□□ 0.44
SCUBE1-203ENST00000449304 SYNJ2O15056 1496 aa17.77■□□□□ 0.44
SCUBE1-203ENST00000449304 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
SCUBE1-203ENST00000449304 FBLN2P98095 1184 aa17.76■□□□□ 0.43
SCUBE1-203ENST00000449304 SUPT5HO00267 1087 aaKnown RBP17.75■□□□□ 0.43
SCUBE1-203ENST00000449304 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
SCUBE1-203ENST00000449304 BIVM-ERCC5R4GMW8 1640 aa17.73■□□□□ 0.43
SCUBE1-203ENST00000449304 CYB5RLQ6IPT4 315 aa17.71■□□□□ 0.43
SCUBE1-203ENST00000449304 TOP2BQ02880 1626 aa17.71■□□□□ 0.43
SCUBE1-203ENST00000449304 CHMP7Q8WUX9 453 aaPredicted RBP17.7■□□□□ 0.42
SCUBE1-203ENST00000449304 WRNQ14191 1432 aaPredicted RBP eCLIP17.67■□□□□ 0.42
SCUBE1-203ENST00000449304 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
SCUBE1-203ENST00000449304 GRIN2AQ12879 1464 aa17.6■□□□□ 0.41
SCUBE1-203ENST00000449304 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
SCUBE1-203ENST00000449304 NUP160Q12769 1436 aa17.57■□□□□ 0.4
SCUBE1-203ENST00000449304 CEP170Q5SW79 1584 aa17.55■□□□□ 0.4
SCUBE1-203ENST00000449304 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
SCUBE1-203ENST00000449304 SHROOM2Q13796 1616 aa17.53■□□□□ 0.4
SCUBE1-203ENST00000449304 ERCC6L2Q5T890 1561 aa17.49■□□□□ 0.39
SCUBE1-203ENST00000449304 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
SCUBE1-203ENST00000449304 RUSC2Q8N2Y8 1516 aa17.38■□□□□ 0.37
SCUBE1-203ENST00000449304 CUL7Q14999 1698 aa17.33■□□□□ 0.37
SCUBE1-203ENST00000449304 PRG4Q92954 1404 aaPredicted RBP17.32■□□□□ 0.36
SCUBE1-203ENST00000449304 KIF27Q86VH2 1401 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms