RNA–Protein interactions for RNA: ENST00000449238.6

GHRL-210, Transcript of ghrelin and obestatin prepropeptide, humanhuman

TSL 1 (best) BASIC

Gene GHRL, Length 440 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHRL-210ENST00000449238 NISCHQ9Y2I1 1504 aa18.17■□□□□ 0.5
GHRL-210ENST00000449238 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
GHRL-210ENST00000449238 ABCC9O60706 1549 aa15.98■□□□□ 0.15
GHRL-210ENST00000449238 DCAF8L2P0C7V8 631 aa15.3■□□□□ 0.04
GHRL-210ENST00000449238 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
GHRL-210ENST00000449238 NACADO15069 1562 aa15.21■□□□□ 0.03
GHRL-210ENST00000449238 ZCCHC6Q5VYS8 1495 aaKnown RBP15.1■□□□□ 0.01
GHRL-210ENST00000449238 UNC13AQ9UPW8 1703 aa15.08■□□□□ 0
GHRL-210ENST00000449238 MYO15BQ96JP2 1530 aa15.02□□□□□ -0.01
GHRL-210ENST00000449238 DCAF1Q9Y4B6 1507 aa14.96□□□□□ -0.02
GHRL-210ENST00000449238 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
GHRL-210ENST00000449238 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
GHRL-210ENST00000449238 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
GHRL-210ENST00000449238 DNAJC5BQ9UF47 199 aa14.74□□□□□ -0.05
GHRL-210ENST00000449238 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
GHRL-210ENST00000449238 EIF4G1Q04637 1599 aaKnown RBP14.45□□□□□ -0.1
GHRL-210ENST00000449238 CC2D2AQ9P2K1 1620 aa14.44□□□□□ -0.1
GHRL-210ENST00000449238 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
GHRL-210ENST00000449238 SMARCA4P51532 1647 aa14.15□□□□□ -0.14
GHRL-210ENST00000449238 BAZ1AQ9NRL2 1556 aaPredicted RBP14.08□□□□□ -0.16
GHRL-210ENST00000449238 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
GHRL-210ENST00000449238 MROH2BQ7Z745 1585 aa14.05□□□□□ -0.16
GHRL-210ENST00000449238 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
GHRL-210ENST00000449238 NCAPD3P42695 1498 aa14.01□□□□□ -0.17
GHRL-210ENST00000449238 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
GHRL-210ENST00000449238 WIZO95785 1651 aa13.95□□□□□ -0.18
GHRL-210ENST00000449238 PEG3Q9GZU2 1588 aa13.94□□□□□ -0.18
GHRL-210ENST00000449238 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
GHRL-210ENST00000449238 NESP48681 1621 aa13.82□□□□□ -0.2
GHRL-210ENST00000449238 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
GHRL-210ENST00000449238 ERCC6Q03468 1493 aa13.74□□□□□ -0.21
GHRL-210ENST00000449238 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
GHRL-210ENST00000449238 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
GHRL-210ENST00000449238 LAMC3Q9Y6N6 1575 aa13.7□□□□□ -0.22
GHRL-210ENST00000449238 CADPSQ9ULU8 1353 aa13.61□□□□□ -0.23
GHRL-210ENST00000449238 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
GHRL-210ENST00000449238 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
GHRL-210ENST00000449238 CCDC88BA6NC98 1476 aa13.56□□□□□ -0.24
GHRL-210ENST00000449238 CUX2O14529 1486 aa13.56□□□□□ -0.24
GHRL-210ENST00000449238 PRDM2Q13029 1718 aa13.54□□□□□ -0.24
GHRL-210ENST00000449238 CFTRP13569 1480 aa13.52□□□□□ -0.25
GHRL-210ENST00000449238 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
GHRL-210ENST00000449238 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
GHRL-210ENST00000449238 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
GHRL-210ENST00000449238 MRC2Q9UBG0 1479 aa13.48□□□□□ -0.25
GHRL-210ENST00000449238 WDR62O43379 1518 aa13.43□□□□□ -0.26
GHRL-210ENST00000449238 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
GHRL-210ENST00000449238 TOPBP1Q92547 1522 aa13.28□□□□□ -0.28
GHRL-210ENST00000449238 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
GHRL-210ENST00000449238 DNMBPQ6XZF7 1577 aa13.25□□□□□ -0.29
GHRL-210ENST00000449238 ABCC8Q09428 1581 aa13.21□□□□□ -0.29
GHRL-210ENST00000449238 ZNF608Q9ULD9 1512 aaPredicted RBP13.19□□□□□ -0.3
GHRL-210ENST00000449238 CUX1P39880 1505 aa13.18□□□□□ -0.3
GHRL-210ENST00000449238 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
GHRL-210ENST00000449238 IFT140Q96RY7 1462 aa13.17□□□□□ -0.3
GHRL-210ENST00000449238 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
GHRL-210ENST00000449238 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
GHRL-210ENST00000449238 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
GHRL-210ENST00000449238 FGD5Q6ZNL6 1462 aa13.13□□□□□ -0.31
GHRL-210ENST00000449238 AQRO60306 1485 aaKnown RBP eCLIP13.1□□□□□ -0.31
GHRL-210ENST00000449238 SOGA1O94964 1423 aa13.1□□□□□ -0.31
GHRL-210ENST00000449238 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
GHRL-210ENST00000449238 CHD1O14646 1710 aa13.06□□□□□ -0.32
GHRL-210ENST00000449238 SYNJ1O43426 1573 aa13.06□□□□□ -0.32
GHRL-210ENST00000449238 TDRD9Q8NDG6 1382 aaKnown RBP13.06□□□□□ -0.32
GHRL-210ENST00000449238 BIVM-ERCC5R4GMW8 1640 aa13.05□□□□□ -0.32
GHRL-210ENST00000449238 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
GHRL-210ENST00000449238 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
GHRL-210ENST00000449238 PBRM1Q86U86 1689 aa13.02□□□□□ -0.33
GHRL-210ENST00000449238 WRNQ14191 1432 aaPredicted RBP eCLIP13.01□□□□□ -0.33
GHRL-210ENST00000449238 FBLN2P98095 1184 aa12.99□□□□□ -0.33
GHRL-210ENST00000449238 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
GHRL-210ENST00000449238 ABCA5Q8WWZ7 1642 aa12.96□□□□□ -0.33
GHRL-210ENST00000449238 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
GHRL-210ENST00000449238 GAPVD1Q14C86 1478 aa12.95□□□□□ -0.34
GHRL-210ENST00000449238 GRIN2BQ13224 1484 aa12.94□□□□□ -0.34
GHRL-210ENST00000449238 RIMBP3CA6NJZ7 1639 aa12.9□□□□□ -0.34
GHRL-210ENST00000449238 RIMBP3BA6NNM3 1639 aa12.9□□□□□ -0.34
GHRL-210ENST00000449238 RIMBP3Q9UFD9 1639 aa12.9□□□□□ -0.34
GHRL-210ENST00000449238 MAGI1Q96QZ7 1491 aaPredicted RBP12.9□□□□□ -0.34
GHRL-210ENST00000449238 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
GHRL-210ENST00000449238 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
GHRL-210ENST00000449238 SYNJ2O15056 1496 aa12.86□□□□□ -0.35
GHRL-210ENST00000449238 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
GHRL-210ENST00000449238 ARHGEF11O15085 1522 aa12.83□□□□□ -0.35
GHRL-210ENST00000449238 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
GHRL-210ENST00000449238 ERICH3Q5RHP9 1530 aa12.8□□□□□ -0.36
GHRL-210ENST00000449238 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
GHRL-210ENST00000449238 FHAD1B1AJZ9 1412 aa12.77□□□□□ -0.37
GHRL-210ENST00000449238 CEP170Q5SW79 1584 aa12.77□□□□□ -0.37
GHRL-210ENST00000449238 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
GHRL-210ENST00000449238 ARAP1Q96P48 1450 aa12.73□□□□□ -0.37
GHRL-210ENST00000449238 KIF27Q86VH2 1401 aa12.73□□□□□ -0.37
GHRL-210ENST00000449238 CUL7Q14999 1698 aa12.71□□□□□ -0.37
GHRL-210ENST00000449238 IGF1RP08069 1367 aa12.7□□□□□ -0.38
GHRL-210ENST00000449238 ERCC6L2Q5T890 1561 aa12.7□□□□□ -0.38
GHRL-210ENST00000449238 RUSC2Q8N2Y8 1516 aa12.7□□□□□ -0.38
GHRL-210ENST00000449238 NUP160Q12769 1436 aa12.7□□□□□ -0.38
GHRL-210ENST00000449238 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
GHRL-210ENST00000449238 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms