RNA–Protein interactions for RNA: ENST00000449209.1

LYPD1-203, Transcript of LY6/PLAUR domain containing 1, humanhuman

TSL 2

Gene LYPD1, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD1-203ENST00000449209 NISCHQ9Y2I1 1504 aa38.61■■■■□ 3.77
LYPD1-203ENST00000449209 CCDC180Q9P1Z9 1646 aa34.33■■■■□ 3.09
LYPD1-203ENST00000449209 ABCC9O60706 1549 aa33.71■■■□□ 2.99
LYPD1-203ENST00000449209 RB1CC1Q8TDY2 1594 aa32.39■■■□□ 2.78
LYPD1-203ENST00000449209 NACADO15069 1562 aa32.36■■■□□ 2.77
LYPD1-203ENST00000449209 DCAF8L2P0C7V8 631 aa32.25■■■□□ 2.75
LYPD1-203ENST00000449209 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
LYPD1-203ENST00000449209 ZCCHC6Q5VYS8 1495 aaKnown RBP32.12■■■□□ 2.73
LYPD1-203ENST00000449209 DCAF1Q9Y4B6 1507 aa31.99■■■□□ 2.71
LYPD1-203ENST00000449209 UNC13AQ9UPW8 1703 aa31.59■■■□□ 2.65
LYPD1-203ENST00000449209 PABPN1Q86U42 306 aaKnown RBP eCLIP31.52■■■□□ 2.64
LYPD1-203ENST00000449209 BICRAQ9NZM4 1560 aa31.44■■■□□ 2.62
LYPD1-203ENST00000449209 SCRIBQ14160 1630 aa31.26■■■□□ 2.59
LYPD1-203ENST00000449209 DNAJC5BQ9UF47 199 aa31.16■■■□□ 2.58
LYPD1-203ENST00000449209 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.57
LYPD1-203ENST00000449209 EIF4G1Q04637 1599 aaKnown RBP30.6■■■□□ 2.49
LYPD1-203ENST00000449209 CC2D2AQ9P2K1 1620 aa30.5■■■□□ 2.47
LYPD1-203ENST00000449209 CECR2Q9BXF3 1484 aa30.33■■■□□ 2.45
LYPD1-203ENST00000449209 SMARCA4P51532 1647 aa29.94■■■□□ 2.38
LYPD1-203ENST00000449209 BAZ1AQ9NRL2 1556 aaPredicted RBP29.91■■■□□ 2.38
LYPD1-203ENST00000449209 NCAPD3P42695 1498 aa29.91■■■□□ 2.38
LYPD1-203ENST00000449209 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
LYPD1-203ENST00000449209 SMARCA2P51531 1590 aa29.79■■■□□ 2.36
LYPD1-203ENST00000449209 MROH2BQ7Z745 1585 aa29.73■■■□□ 2.35
LYPD1-203ENST00000449209 PEG3Q9GZU2 1588 aa29.71■■■□□ 2.35
LYPD1-203ENST00000449209 HMGXB3Q12766 1538 aa29.69■■■□□ 2.34
LYPD1-203ENST00000449209 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
LYPD1-203ENST00000449209 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
LYPD1-203ENST00000449209 WIZO95785 1651 aa29.36■■■□□ 2.29
LYPD1-203ENST00000449209 NESP48681 1621 aa29.15■■■□□ 2.26
LYPD1-203ENST00000449209 TOP2AP11388 1531 aaKnown RBP29.07■■■□□ 2.24
LYPD1-203ENST00000449209 LAMC3Q9Y6N6 1575 aa29.07■■■□□ 2.24
LYPD1-203ENST00000449209 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
LYPD1-203ENST00000449209 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.24
LYPD1-203ENST00000449209 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
LYPD1-203ENST00000449209 CUX2O14529 1486 aa28.85■■■□□ 2.21
LYPD1-203ENST00000449209 CFTRP13569 1480 aa28.81■■■□□ 2.2
LYPD1-203ENST00000449209 CCDC88BA6NC98 1476 aa28.77■■■□□ 2.2
LYPD1-203ENST00000449209 KIF21AQ7Z4S6 1674 aa28.74■■■□□ 2.19
LYPD1-203ENST00000449209 THOC2Q8NI27 1593 aaKnown RBP28.71■■■□□ 2.19
LYPD1-203ENST00000449209 FANCD2Q9BXW9 1451 aa28.63■■■□□ 2.17
LYPD1-203ENST00000449209 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
LYPD1-203ENST00000449209 CEP164Q9UPV0 1460 aa28.59■■■□□ 2.17
LYPD1-203ENST00000449209 WDR62O43379 1518 aa28.5■■■□□ 2.15
LYPD1-203ENST00000449209 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
LYPD1-203ENST00000449209 PRDM2Q13029 1718 aa28.44■■■□□ 2.14
LYPD1-203ENST00000449209 URB2Q14146 1524 aaKnown RBP28.36■■■□□ 2.13
LYPD1-203ENST00000449209 DNAJC5Q9H3Z4 198 aa28.19■■■□□ 2.1
LYPD1-203ENST00000449209 ABCC8Q09428 1581 aa28.19■■■□□ 2.1
LYPD1-203ENST00000449209 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
LYPD1-203ENST00000449209 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
LYPD1-203ENST00000449209 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
LYPD1-203ENST00000449209 POLA1P09884 1462 aaPredicted RBP27.91■■■□□ 2.06
LYPD1-203ENST00000449209 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
LYPD1-203ENST00000449209 CUX1P39880 1505 aa27.89■■■□□ 2.06
LYPD1-203ENST00000449209 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
LYPD1-203ENST00000449209 SOGA1O94964 1423 aa27.82■■■□□ 2.04
LYPD1-203ENST00000449209 FGD5Q6ZNL6 1462 aa27.81■■■□□ 2.04
LYPD1-203ENST00000449209 RAD54L2Q9Y4B4 1467 aa27.78■■■□□ 2.04
LYPD1-203ENST00000449209 AQRO60306 1485 aaKnown RBP eCLIP27.74■■■□□ 2.03
LYPD1-203ENST00000449209 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
LYPD1-203ENST00000449209 WRNQ14191 1432 aaPredicted RBP eCLIP27.67■■■□□ 2.02
LYPD1-203ENST00000449209 OSCARQ8IYS5 282 aa27.67■■■□□ 2.02
LYPD1-203ENST00000449209 TDRD9Q8NDG6 1382 aaKnown RBP27.66■■■□□ 2.02
LYPD1-203ENST00000449209 WDR97A6NE52 1622 aa27.65■■■□□ 2.02
LYPD1-203ENST00000449209 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
LYPD1-203ENST00000449209 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
LYPD1-203ENST00000449209 SYNJ1O43426 1573 aa27.58■■■□□ 2.01
LYPD1-203ENST00000449209 ABCA10Q8WWZ4 1543 aa27.57■■■□□ 2
LYPD1-203ENST00000449209 GRIN2BQ13224 1484 aa27.5■■□□□ 1.99
LYPD1-203ENST00000449209 GAPVD1Q14C86 1478 aa27.47■■□□□ 1.99
LYPD1-203ENST00000449209 SNAPC4Q5SXM2 1469 aa27.44■■□□□ 1.98
LYPD1-203ENST00000449209 MAGI1Q96QZ7 1491 aaPredicted RBP27.44■■□□□ 1.98
LYPD1-203ENST00000449209 ABCA5Q8WWZ7 1642 aa27.42■■□□□ 1.98
LYPD1-203ENST00000449209 FBLN2P98095 1184 aa27.39■■□□□ 1.98
LYPD1-203ENST00000449209 CHD1O14646 1710 aa27.37■■□□□ 1.97
LYPD1-203ENST00000449209 CHMP7Q8WUX9 453 aaPredicted RBP27.34■■□□□ 1.97
LYPD1-203ENST00000449209 PBRM1Q86U86 1689 aa27.33■■□□□ 1.97
LYPD1-203ENST00000449209 SYNJ2O15056 1496 aa27.33■■□□□ 1.97
LYPD1-203ENST00000449209 ERICH3Q5RHP9 1530 aa27.23■■□□□ 1.95
LYPD1-203ENST00000449209 FHAD1B1AJZ9 1412 aa27.17■■□□□ 1.94
LYPD1-203ENST00000449209 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
LYPD1-203ENST00000449209 ADAMTS12P58397 1594 aa27.16■■□□□ 1.94
LYPD1-203ENST00000449209 ARHGEF11O15085 1522 aa27.16■■□□□ 1.94
LYPD1-203ENST00000449209 RIMBP3CA6NJZ7 1639 aa27.15■■□□□ 1.94
LYPD1-203ENST00000449209 RIMBP3BA6NNM3 1639 aa27.15■■□□□ 1.94
LYPD1-203ENST00000449209 RIMBP3Q9UFD9 1639 aa27.15■■□□□ 1.94
LYPD1-203ENST00000449209 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
LYPD1-203ENST00000449209 KIF27Q86VH2 1401 aa27.11■■□□□ 1.93
LYPD1-203ENST00000449209 IGF1RP08069 1367 aa27.09■■□□□ 1.93
LYPD1-203ENST00000449209 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
LYPD1-203ENST00000449209 NUP160Q12769 1436 aa27.05■■□□□ 1.92
LYPD1-203ENST00000449209 CEP170Q5SW79 1584 aa26.98■■□□□ 1.91
LYPD1-203ENST00000449209 CYB5RLQ6IPT4 315 aa26.94■■□□□ 1.9
LYPD1-203ENST00000449209 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
LYPD1-203ENST00000449209 CUL7Q14999 1698 aa26.91■■□□□ 1.9
LYPD1-203ENST00000449209 CARMIL1Q5VZK9 1371 aa26.87■■□□□ 1.89
LYPD1-203ENST00000449209 SHROOM2Q13796 1616 aa26.83■■□□□ 1.88
LYPD1-203ENST00000449209 RUSC2Q8N2Y8 1516 aa26.82■■□□□ 1.88
LYPD1-203ENST00000449209 JPH4Q96JJ6 628 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms