RNA–Protein interactions for RNA: ENST00000448911.1

OPTC-202, Transcript of opticin, humanhuman

TSL 2

Gene OPTC, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTC-202ENST00000448911 NISCHQ9Y2I1 1504 aa22.82■■□□□ 1.24
OPTC-202ENST00000448911 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
OPTC-202ENST00000448911 ABCC9O60706 1549 aa19.28■□□□□ 0.68
OPTC-202ENST00000448911 ZCCHC6Q5VYS8 1495 aaKnown RBP19.12■□□□□ 0.65
OPTC-202ENST00000448911 DCAF1Q9Y4B6 1507 aa18.97■□□□□ 0.63
OPTC-202ENST00000448911 MYO15BQ96JP2 1530 aa18.92■□□□□ 0.62
OPTC-202ENST00000448911 NACADO15069 1562 aa18.88■□□□□ 0.61
OPTC-202ENST00000448911 RB1CC1Q8TDY2 1594 aa18.8■□□□□ 0.6
OPTC-202ENST00000448911 DCAF8L2P0C7V8 631 aa18.74■□□□□ 0.59
OPTC-202ENST00000448911 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
OPTC-202ENST00000448911 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
OPTC-202ENST00000448911 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
OPTC-202ENST00000448911 SHROOM4Q9ULL8 1493 aa18.14■□□□□ 0.5
OPTC-202ENST00000448911 PABPN1Q86U42 306 aaKnown RBP eCLIP18.01■□□□□ 0.47
OPTC-202ENST00000448911 EIF4G1Q04637 1599 aaKnown RBP17.69■□□□□ 0.42
OPTC-202ENST00000448911 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
OPTC-202ENST00000448911 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
OPTC-202ENST00000448911 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
OPTC-202ENST00000448911 MROH2BQ7Z745 1585 aa17.56■□□□□ 0.4
OPTC-202ENST00000448911 PEG3Q9GZU2 1588 aa17.51■□□□□ 0.39
OPTC-202ENST00000448911 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
OPTC-202ENST00000448911 RSF1Q96T23 1441 aaPredicted RBP17.49■□□□□ 0.39
OPTC-202ENST00000448911 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
OPTC-202ENST00000448911 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
OPTC-202ENST00000448911 WIZO95785 1651 aa17.39■□□□□ 0.37
OPTC-202ENST00000448911 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
OPTC-202ENST00000448911 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
OPTC-202ENST00000448911 BAZ1BQ9UIG0 1483 aaKnown RBP17.32■□□□□ 0.36
OPTC-202ENST00000448911 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
OPTC-202ENST00000448911 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
OPTC-202ENST00000448911 SUPT5HO00267 1087 aaKnown RBP17.22■□□□□ 0.35
OPTC-202ENST00000448911 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
OPTC-202ENST00000448911 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.3
OPTC-202ENST00000448911 CFTRP13569 1480 aa16.87■□□□□ 0.29
OPTC-202ENST00000448911 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
OPTC-202ENST00000448911 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
OPTC-202ENST00000448911 NESP48681 1621 aa16.79■□□□□ 0.28
OPTC-202ENST00000448911 PDS5BQ9NTI5 1447 aa16.73■□□□□ 0.27
OPTC-202ENST00000448911 FANCD2Q9BXW9 1451 aa16.68■□□□□ 0.26
OPTC-202ENST00000448911 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
OPTC-202ENST00000448911 CEP164Q9UPV0 1460 aa16.66■□□□□ 0.26
OPTC-202ENST00000448911 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
OPTC-202ENST00000448911 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
OPTC-202ENST00000448911 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
OPTC-202ENST00000448911 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
OPTC-202ENST00000448911 WDR62O43379 1518 aa16.51■□□□□ 0.23
OPTC-202ENST00000448911 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
OPTC-202ENST00000448911 WRNQ14191 1432 aaPredicted RBP eCLIP16.5■□□□□ 0.23
OPTC-202ENST00000448911 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
OPTC-202ENST00000448911 CUX1P39880 1505 aa16.47■□□□□ 0.23
OPTC-202ENST00000448911 TOPBP1Q92547 1522 aa16.47■□□□□ 0.23
OPTC-202ENST00000448911 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
OPTC-202ENST00000448911 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
OPTC-202ENST00000448911 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
OPTC-202ENST00000448911 CUX2O14529 1486 aa16.37■□□□□ 0.21
OPTC-202ENST00000448911 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
OPTC-202ENST00000448911 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
OPTC-202ENST00000448911 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
OPTC-202ENST00000448911 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
OPTC-202ENST00000448911 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
OPTC-202ENST00000448911 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.2
OPTC-202ENST00000448911 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
OPTC-202ENST00000448911 SOGA1O94964 1423 aa16.25■□□□□ 0.19
OPTC-202ENST00000448911 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
OPTC-202ENST00000448911 RAD54L2Q9Y4B4 1467 aa16.22■□□□□ 0.19
OPTC-202ENST00000448911 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
OPTC-202ENST00000448911 EIF4G3O43432 1585 aaKnown RBP16.15■□□□□ 0.18
OPTC-202ENST00000448911 KIF27Q86VH2 1401 aa16.13■□□□□ 0.17
OPTC-202ENST00000448911 ZNF608Q9ULD9 1512 aaPredicted RBP16.13■□□□□ 0.17
OPTC-202ENST00000448911 EEA1Q15075 1411 aa16.11■□□□□ 0.17
OPTC-202ENST00000448911 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
OPTC-202ENST00000448911 PBRM1Q86U86 1689 aa16.08■□□□□ 0.17
OPTC-202ENST00000448911 TDRD9Q8NDG6 1382 aaKnown RBP16.08■□□□□ 0.16
OPTC-202ENST00000448911 ERICH3Q5RHP9 1530 aa16.08■□□□□ 0.16
OPTC-202ENST00000448911 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
OPTC-202ENST00000448911 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
OPTC-202ENST00000448911 CUL7Q14999 1698 aa16.02■□□□□ 0.16
OPTC-202ENST00000448911 RUSC2Q8N2Y8 1516 aa16.01■□□□□ 0.15
OPTC-202ENST00000448911 MAGI1Q96QZ7 1491 aaPredicted RBP16.01■□□□□ 0.15
OPTC-202ENST00000448911 ADAMTS12P58397 1594 aa15.99■□□□□ 0.15
OPTC-202ENST00000448911 SNAPC4Q5SXM2 1469 aa15.98■□□□□ 0.15
OPTC-202ENST00000448911 IGF1RP08069 1367 aa15.98■□□□□ 0.15
OPTC-202ENST00000448911 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
OPTC-202ENST00000448911 SYNJ2O15056 1496 aa15.92■□□□□ 0.14
OPTC-202ENST00000448911 PRXQ9BXM0 1461 aa15.92■□□□□ 0.14
OPTC-202ENST00000448911 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
OPTC-202ENST00000448911 KIF21BO75037 1637 aa15.92■□□□□ 0.14
OPTC-202ENST00000448911 CARMIL1Q5VZK9 1371 aa15.9■□□□□ 0.14
OPTC-202ENST00000448911 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
OPTC-202ENST00000448911 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
OPTC-202ENST00000448911 GRIN2AQ12879 1464 aa15.86■□□□□ 0.13
OPTC-202ENST00000448911 CHD1O14646 1710 aa15.86■□□□□ 0.13
OPTC-202ENST00000448911 GOLGA3Q08378 1498 aa15.82■□□□□ 0.12
OPTC-202ENST00000448911 CHMP7Q8WUX9 453 aaPredicted RBP15.81■□□□□ 0.12
OPTC-202ENST00000448911 NUP160Q12769 1436 aa15.78■□□□□ 0.12
OPTC-202ENST00000448911 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
OPTC-202ENST00000448911 CTTNBP2Q8WZ74 1663 aa15.76■□□□□ 0.11
OPTC-202ENST00000448911 FBLN2P98095 1184 aa15.75■□□□□ 0.11
OPTC-202ENST00000448911 CLASP1Q7Z460 1538 aa15.71■□□□□ 0.11
OPTC-202ENST00000448911 KIAA0586Q9BVV6 1533 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms