RNA–Protein interactions for RNA: ENST00000448847.1

PLXNB3-203, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-203ENST00000448847 NISCHQ9Y2I1 1504 aa37.56■■■■□ 3.6
PLXNB3-203ENST00000448847 CCDC180Q9P1Z9 1646 aa33.5■■■□□ 2.95
PLXNB3-203ENST00000448847 ABCC9O60706 1549 aa33.14■■■□□ 2.9
PLXNB3-203ENST00000448847 RB1CC1Q8TDY2 1594 aa31.75■■■□□ 2.67
PLXNB3-203ENST00000448847 DCAF8L2P0C7V8 631 aa31.69■■■□□ 2.66
PLXNB3-203ENST00000448847 NACADO15069 1562 aa31.64■■■□□ 2.65
PLXNB3-203ENST00000448847 MYO15BQ96JP2 1530 aa31.32■■■□□ 2.6
PLXNB3-203ENST00000448847 ZCCHC6Q5VYS8 1495 aaKnown RBP31.17■■■□□ 2.58
PLXNB3-203ENST00000448847 DCAF1Q9Y4B6 1507 aa31.06■■■□□ 2.56
PLXNB3-203ENST00000448847 PABPN1Q86U42 306 aaKnown RBP eCLIP30.97■■■□□ 2.55
PLXNB3-203ENST00000448847 UNC13AQ9UPW8 1703 aa30.93■■■□□ 2.54
PLXNB3-203ENST00000448847 DNAJC5BQ9UF47 199 aa30.73■■■□□ 2.51
PLXNB3-203ENST00000448847 BICRAQ9NZM4 1560 aa30.71■■■□□ 2.51
PLXNB3-203ENST00000448847 SCRIBQ14160 1630 aa30.54■■■□□ 2.48
PLXNB3-203ENST00000448847 SHROOM4Q9ULL8 1493 aa30.44■■■□□ 2.46
PLXNB3-203ENST00000448847 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
PLXNB3-203ENST00000448847 CC2D2AQ9P2K1 1620 aa29.95■■■□□ 2.38
PLXNB3-203ENST00000448847 CECR2Q9BXF3 1484 aa29.84■■■□□ 2.37
PLXNB3-203ENST00000448847 NCAPD3P42695 1498 aa29.2■■■□□ 2.26
PLXNB3-203ENST00000448847 SMARCA4P51532 1647 aa29.18■■■□□ 2.26
PLXNB3-203ENST00000448847 ATAD2BQ9ULI0 1458 aa29.15■■■□□ 2.26
PLXNB3-203ENST00000448847 BAZ1AQ9NRL2 1556 aaPredicted RBP29.14■■■□□ 2.26
PLXNB3-203ENST00000448847 SMARCA2P51531 1590 aa29.11■■■□□ 2.25
PLXNB3-203ENST00000448847 HMGXB3Q12766 1538 aa28.98■■■□□ 2.23
PLXNB3-203ENST00000448847 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
PLXNB3-203ENST00000448847 BAZ1BQ9UIG0 1483 aaKnown RBP28.91■■■□□ 2.22
PLXNB3-203ENST00000448847 PEG3Q9GZU2 1588 aa28.9■■■□□ 2.22
PLXNB3-203ENST00000448847 ERCC6Q03468 1493 aa28.65■■■□□ 2.18
PLXNB3-203ENST00000448847 WIZO95785 1651 aa28.58■■■□□ 2.16
PLXNB3-203ENST00000448847 NESP48681 1621 aa28.54■■■□□ 2.16
PLXNB3-203ENST00000448847 RSF1Q96T23 1441 aaPredicted RBP28.49■■■□□ 2.15
PLXNB3-203ENST00000448847 LAMC3Q9Y6N6 1575 aa28.47■■■□□ 2.15
PLXNB3-203ENST00000448847 CUX2O14529 1486 aa28.44■■■□□ 2.14
PLXNB3-203ENST00000448847 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
PLXNB3-203ENST00000448847 PDS5BQ9NTI5 1447 aa28.36■■■□□ 2.13
PLXNB3-203ENST00000448847 TOP2AP11388 1531 aaKnown RBP28.27■■■□□ 2.12
PLXNB3-203ENST00000448847 KIF21AQ7Z4S6 1674 aa28.17■■■□□ 2.1
PLXNB3-203ENST00000448847 THOC2Q8NI27 1593 aaKnown RBP28.15■■■□□ 2.1
PLXNB3-203ENST00000448847 CFTRP13569 1480 aa28.08■■■□□ 2.09
PLXNB3-203ENST00000448847 MRC2Q9UBG0 1479 aa28.02■■■□□ 2.08
PLXNB3-203ENST00000448847 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
PLXNB3-203ENST00000448847 FANCD2Q9BXW9 1451 aa28.01■■■□□ 2.07
PLXNB3-203ENST00000448847 CEP164Q9UPV0 1460 aa28■■■□□ 2.07
PLXNB3-203ENST00000448847 CCDC88BA6NC98 1476 aa27.97■■■□□ 2.07
PLXNB3-203ENST00000448847 WDR62O43379 1518 aa27.91■■■□□ 2.06
PLXNB3-203ENST00000448847 PRDM2Q13029 1718 aa27.78■■■□□ 2.04
PLXNB3-203ENST00000448847 URB2Q14146 1524 aaKnown RBP27.7■■■□□ 2.02
PLXNB3-203ENST00000448847 SUPT5HO00267 1087 aaKnown RBP27.63■■■□□ 2.01
PLXNB3-203ENST00000448847 ABCC8Q09428 1581 aa27.56■■■□□ 2
PLXNB3-203ENST00000448847 TOPBP1Q92547 1522 aa27.5■■□□□ 1.99
PLXNB3-203ENST00000448847 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
PLXNB3-203ENST00000448847 DNMBPQ6XZF7 1577 aa27.43■■□□□ 1.98
PLXNB3-203ENST00000448847 OSCARQ8IYS5 282 aa27.31■■□□□ 1.96
PLXNB3-203ENST00000448847 ZNF608Q9ULD9 1512 aaPredicted RBP27.3■■□□□ 1.96
PLXNB3-203ENST00000448847 POLA1P09884 1462 aaPredicted RBP27.23■■□□□ 1.95
PLXNB3-203ENST00000448847 SOGA1O94964 1423 aa27.19■■□□□ 1.94
PLXNB3-203ENST00000448847 TARBP1Q13395 1621 aaKnown RBP27.19■■□□□ 1.94
PLXNB3-203ENST00000448847 EIF4G3O43432 1585 aaKnown RBP27.14■■□□□ 1.94
PLXNB3-203ENST00000448847 AQRO60306 1485 aaKnown RBP eCLIP27.14■■□□□ 1.94
PLXNB3-203ENST00000448847 CUX1P39880 1505 aa27.14■■□□□ 1.94
PLXNB3-203ENST00000448847 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
PLXNB3-203ENST00000448847 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
PLXNB3-203ENST00000448847 TDRD9Q8NDG6 1382 aaKnown RBP27.06■■□□□ 1.92
PLXNB3-203ENST00000448847 WDR97A6NE52 1622 aa27■■□□□ 1.91
PLXNB3-203ENST00000448847 FBLN2P98095 1184 aa26.99■■□□□ 1.91
PLXNB3-203ENST00000448847 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
PLXNB3-203ENST00000448847 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
PLXNB3-203ENST00000448847 GRIN2BQ13224 1484 aa26.89■■□□□ 1.9
PLXNB3-203ENST00000448847 CHMP7Q8WUX9 453 aaPredicted RBP26.87■■□□□ 1.89
PLXNB3-203ENST00000448847 CHD1O14646 1710 aa26.87■■□□□ 1.89
PLXNB3-203ENST00000448847 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
PLXNB3-203ENST00000448847 SNAPC4Q5SXM2 1469 aa26.86■■□□□ 1.89
PLXNB3-203ENST00000448847 GAPVD1Q14C86 1478 aa26.85■■□□□ 1.89
PLXNB3-203ENST00000448847 MAGI1Q96QZ7 1491 aaPredicted RBP26.84■■□□□ 1.89
PLXNB3-203ENST00000448847 TOP2BQ02880 1626 aa26.83■■□□□ 1.88
PLXNB3-203ENST00000448847 BIVM-ERCC5R4GMW8 1640 aa26.8■■□□□ 1.88
PLXNB3-203ENST00000448847 SYNJ1O43426 1573 aa26.77■■□□□ 1.88
PLXNB3-203ENST00000448847 RIMBP3CA6NJZ7 1639 aa26.75■■□□□ 1.87
PLXNB3-203ENST00000448847 RIMBP3BA6NNM3 1639 aa26.75■■□□□ 1.87
PLXNB3-203ENST00000448847 RIMBP3Q9UFD9 1639 aa26.75■■□□□ 1.87
PLXNB3-203ENST00000448847 SYNJ2O15056 1496 aa26.74■■□□□ 1.87
PLXNB3-203ENST00000448847 ARHGEF11O15085 1522 aa26.73■■□□□ 1.87
PLXNB3-203ENST00000448847 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
PLXNB3-203ENST00000448847 ABCA5Q8WWZ7 1642 aa26.72■■□□□ 1.87
PLXNB3-203ENST00000448847 CYB5RLQ6IPT4 315 aa26.62■■□□□ 1.85
PLXNB3-203ENST00000448847 CLASP1Q7Z460 1538 aa26.57■■□□□ 1.84
PLXNB3-203ENST00000448847 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
PLXNB3-203ENST00000448847 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
PLXNB3-203ENST00000448847 GRIN2AQ12879 1464 aa26.5■■□□□ 1.83
PLXNB3-203ENST00000448847 ADAMTS12P58397 1594 aa26.5■■□□□ 1.83
PLXNB3-203ENST00000448847 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
PLXNB3-203ENST00000448847 KIF27Q86VH2 1401 aa26.4■■□□□ 1.82
PLXNB3-203ENST00000448847 NUP160Q12769 1436 aa26.39■■□□□ 1.82
PLXNB3-203ENST00000448847 CEP170Q5SW79 1584 aa26.34■■□□□ 1.81
PLXNB3-203ENST00000448847 IGF1RP08069 1367 aa26.33■■□□□ 1.8
PLXNB3-203ENST00000448847 JPH4Q96JJ6 628 aa26.24■■□□□ 1.79
PLXNB3-203ENST00000448847 TRHP20396 242 aaPredicted RBP26.23■■□□□ 1.79
PLXNB3-203ENST00000448847 CUL7Q14999 1698 aa26.22■■□□□ 1.79
PLXNB3-203ENST00000448847 SHROOM2Q13796 1616 aa26.2■■□□□ 1.78
PLXNB3-203ENST00000448847 CARMIL1Q5VZK9 1371 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms