RNA–Protein interactions for RNA: ENST00000448703.5

GLI3-204, Transcript of GLI family zinc finger 3, humanhuman

TSL 3

Gene GLI3, Length 653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-204ENST00000448703 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
GLI3-204ENST00000448703 ABCC9O60706 1549 aa30.74■■■□□ 2.51
GLI3-204ENST00000448703 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
GLI3-204ENST00000448703 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
GLI3-204ENST00000448703 RB1CC1Q8TDY2 1594 aa28.95■■■□□ 2.22
GLI3-204ENST00000448703 NACADO15069 1562 aa28.63■■■□□ 2.17
GLI3-204ENST00000448703 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
GLI3-204ENST00000448703 DCAF8L2P0C7V8 631 aa28.48■■■□□ 2.15
GLI3-204ENST00000448703 UNC13AQ9UPW8 1703 aa28.31■■■□□ 2.12
GLI3-204ENST00000448703 BICRAQ9NZM4 1560 aa28.2■■■□□ 2.11
GLI3-204ENST00000448703 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
GLI3-204ENST00000448703 CECR2Q9BXF3 1484 aa27.72■■■□□ 2.03
GLI3-204ENST00000448703 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
GLI3-204ENST00000448703 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.02
GLI3-204ENST00000448703 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
GLI3-204ENST00000448703 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
GLI3-204ENST00000448703 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
GLI3-204ENST00000448703 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
GLI3-204ENST00000448703 DNAJC5Q9H3Z4 198 aa27.29■■□□□ 1.96
GLI3-204ENST00000448703 CUX2O14529 1486 aa26.64■■□□□ 1.86
GLI3-204ENST00000448703 ERCC6Q03468 1493 aa26.52■■□□□ 1.84
GLI3-204ENST00000448703 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
GLI3-204ENST00000448703 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
GLI3-204ENST00000448703 NESP48681 1621 aa26.28■■□□□ 1.8
GLI3-204ENST00000448703 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
GLI3-204ENST00000448703 SMARCA2P51531 1590 aa26.17■■□□□ 1.78
GLI3-204ENST00000448703 SMARCA4P51532 1647 aa26.15■■□□□ 1.78
GLI3-204ENST00000448703 THOC2Q8NI27 1593 aaKnown RBP26.06■■□□□ 1.76
GLI3-204ENST00000448703 BAZ1BQ9UIG0 1483 aaKnown RBP26.03■■□□□ 1.76
GLI3-204ENST00000448703 BAZ1AQ9NRL2 1556 aaPredicted RBP25.93■■□□□ 1.74
GLI3-204ENST00000448703 LAMC3Q9Y6N6 1575 aa25.92■■□□□ 1.74
GLI3-204ENST00000448703 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
GLI3-204ENST00000448703 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
GLI3-204ENST00000448703 KIF21AQ7Z4S6 1674 aa25.85■■□□□ 1.73
GLI3-204ENST00000448703 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
GLI3-204ENST00000448703 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
GLI3-204ENST00000448703 CADPSQ9ULU8 1353 aa25.67■■□□□ 1.7
GLI3-204ENST00000448703 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
GLI3-204ENST00000448703 WDR62O43379 1518 aa25.58■■□□□ 1.69
GLI3-204ENST00000448703 WIZO95785 1651 aa25.42■■□□□ 1.66
GLI3-204ENST00000448703 CEP164Q9UPV0 1460 aa25.41■■□□□ 1.66
GLI3-204ENST00000448703 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
GLI3-204ENST00000448703 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
GLI3-204ENST00000448703 CFTRP13569 1480 aa25.26■■□□□ 1.63
GLI3-204ENST00000448703 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
GLI3-204ENST00000448703 RIMBP3CA6NJZ7 1639 aa25.09■■□□□ 1.61
GLI3-204ENST00000448703 RIMBP3BA6NNM3 1639 aa25.09■■□□□ 1.61
GLI3-204ENST00000448703 RIMBP3Q9UFD9 1639 aa25.09■■□□□ 1.61
GLI3-204ENST00000448703 RSF1Q96T23 1441 aaPredicted RBP25.05■■□□□ 1.6
GLI3-204ENST00000448703 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
GLI3-204ENST00000448703 ZNF608Q9ULD9 1512 aaPredicted RBP25.01■■□□□ 1.59
GLI3-204ENST00000448703 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
GLI3-204ENST00000448703 IFT140Q96RY7 1462 aa24.93■■□□□ 1.58
GLI3-204ENST00000448703 CYB5RLQ6IPT4 315 aa24.86■■□□□ 1.57
GLI3-204ENST00000448703 PRDM2Q13029 1718 aa24.85■■□□□ 1.57
GLI3-204ENST00000448703 TOPBP1Q92547 1522 aa24.83■■□□□ 1.57
GLI3-204ENST00000448703 CCDC88BA6NC98 1476 aa24.81■■□□□ 1.56
GLI3-204ENST00000448703 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
GLI3-204ENST00000448703 AQRO60306 1485 aaKnown RBP eCLIP24.72■■□□□ 1.55
GLI3-204ENST00000448703 TRHP20396 242 aaPredicted RBP24.72■■□□□ 1.55
GLI3-204ENST00000448703 ARAP1Q96P48 1450 aa24.71■■□□□ 1.55
GLI3-204ENST00000448703 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
GLI3-204ENST00000448703 CHD1O14646 1710 aa24.67■■□□□ 1.54
GLI3-204ENST00000448703 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
GLI3-204ENST00000448703 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.54
GLI3-204ENST00000448703 FBLN2P98095 1184 aa24.64■■□□□ 1.54
GLI3-204ENST00000448703 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
GLI3-204ENST00000448703 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
GLI3-204ENST00000448703 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
GLI3-204ENST00000448703 SOGA1O94964 1423 aa24.44■■□□□ 1.5
GLI3-204ENST00000448703 CLASP1Q7Z460 1538 aa24.42■■□□□ 1.5
GLI3-204ENST00000448703 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
GLI3-204ENST00000448703 AEBP2Q6ZN18 517 aaPredicted RBP24.35■■□□□ 1.49
GLI3-204ENST00000448703 CHMP7Q8WUX9 453 aaPredicted RBP24.35■■□□□ 1.49
GLI3-204ENST00000448703 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
GLI3-204ENST00000448703 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
GLI3-204ENST00000448703 MAGI1Q96QZ7 1491 aaPredicted RBP24.28■■□□□ 1.48
GLI3-204ENST00000448703 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
GLI3-204ENST00000448703 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
GLI3-204ENST00000448703 SYNJ2O15056 1496 aa24.23■■□□□ 1.47
GLI3-204ENST00000448703 CUX1P39880 1505 aa24.23■■□□□ 1.47
GLI3-204ENST00000448703 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
GLI3-204ENST00000448703 PBRM1Q86U86 1689 aa24.08■■□□□ 1.45
GLI3-204ENST00000448703 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
GLI3-204ENST00000448703 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
GLI3-204ENST00000448703 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
GLI3-204ENST00000448703 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
GLI3-204ENST00000448703 CEP170Q5SW79 1584 aa23.92■■□□□ 1.42
GLI3-204ENST00000448703 NUP160Q12769 1436 aa23.91■■□□□ 1.42
GLI3-204ENST00000448703 ADAMTS12P58397 1594 aa23.85■■□□□ 1.41
GLI3-204ENST00000448703 SHROOM2Q13796 1616 aa23.82■■□□□ 1.4
GLI3-204ENST00000448703 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
GLI3-204ENST00000448703 KIF13AQ9H1H9 1805 aa23.78■■□□□ 1.4
GLI3-204ENST00000448703 FHAD1B1AJZ9 1412 aa23.77■■□□□ 1.4
GLI3-204ENST00000448703 PRG4Q92954 1404 aaPredicted RBP23.72■■□□□ 1.39
GLI3-204ENST00000448703 JPH4Q96JJ6 628 aa23.69■■□□□ 1.38
GLI3-204ENST00000448703 FAM69CQ0P6D2 419 aa23.67■■□□□ 1.38
GLI3-204ENST00000448703 ERICH3Q5RHP9 1530 aa23.66■■□□□ 1.38
GLI3-204ENST00000448703 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
GLI3-204ENST00000448703 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms