RNA–Protein interactions for RNA: ENST00000448604.1

GAL3ST1-220, Transcript of galactose-3-O-sulfotransferase 1, humanhuman

TSL 4

Gene GAL3ST1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAL3ST1-220ENST00000448604 NISCHQ9Y2I1 1504 aa28.86■■■□□ 2.21
GAL3ST1-220ENST00000448604 CCDC180Q9P1Z9 1646 aa25.74■■□□□ 1.71
GAL3ST1-220ENST00000448604 ABCC9O60706 1549 aa25.31■■□□□ 1.64
GAL3ST1-220ENST00000448604 RB1CC1Q8TDY2 1594 aa24.32■■□□□ 1.48
GAL3ST1-220ENST00000448604 NACADO15069 1562 aa24.31■■□□□ 1.48
GAL3ST1-220ENST00000448604 MYO15BQ96JP2 1530 aa24.21■■□□□ 1.47
GAL3ST1-220ENST00000448604 DCAF8L2P0C7V8 631 aa24.02■■□□□ 1.44
GAL3ST1-220ENST00000448604 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
GAL3ST1-220ENST00000448604 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
GAL3ST1-220ENST00000448604 UNC13AQ9UPW8 1703 aa23.79■■□□□ 1.4
GAL3ST1-220ENST00000448604 BICRAQ9NZM4 1560 aa23.67■■□□□ 1.38
GAL3ST1-220ENST00000448604 DNAJC5BQ9UF47 199 aa23.67■■□□□ 1.38
GAL3ST1-220ENST00000448604 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
GAL3ST1-220ENST00000448604 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
GAL3ST1-220ENST00000448604 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
GAL3ST1-220ENST00000448604 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
GAL3ST1-220ENST00000448604 CC2D2AQ9P2K1 1620 aa22.95■■□□□ 1.26
GAL3ST1-220ENST00000448604 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
GAL3ST1-220ENST00000448604 NCAPD3P42695 1498 aa22.5■■□□□ 1.19
GAL3ST1-220ENST00000448604 ATAD2BQ9ULI0 1458 aa22.39■■□□□ 1.17
GAL3ST1-220ENST00000448604 SMARCA4P51532 1647 aa22.38■■□□□ 1.17
GAL3ST1-220ENST00000448604 BAZ1AQ9NRL2 1556 aaPredicted RBP22.34■■□□□ 1.17
GAL3ST1-220ENST00000448604 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
GAL3ST1-220ENST00000448604 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
GAL3ST1-220ENST00000448604 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
GAL3ST1-220ENST00000448604 MROH2BQ7Z745 1585 aa22.19■■□□□ 1.14
GAL3ST1-220ENST00000448604 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
GAL3ST1-220ENST00000448604 RSF1Q96T23 1441 aaPredicted RBP21.9■■□□□ 1.1
GAL3ST1-220ENST00000448604 WIZO95785 1651 aa21.89■■□□□ 1.1
GAL3ST1-220ENST00000448604 NESP48681 1621 aa21.87■■□□□ 1.09
GAL3ST1-220ENST00000448604 LAMC3Q9Y6N6 1575 aa21.84■■□□□ 1.09
GAL3ST1-220ENST00000448604 ERCC6Q03468 1493 aa21.83■■□□□ 1.09
GAL3ST1-220ENST00000448604 CUX2O14529 1486 aa21.81■■□□□ 1.08
GAL3ST1-220ENST00000448604 CADPSQ9ULU8 1353 aa21.77■■□□□ 1.08
GAL3ST1-220ENST00000448604 PDS5BQ9NTI5 1447 aa21.71■■□□□ 1.07
GAL3ST1-220ENST00000448604 TOP2AP11388 1531 aaKnown RBP21.66■■□□□ 1.06
GAL3ST1-220ENST00000448604 CFTRP13569 1480 aa21.6■■□□□ 1.05
GAL3ST1-220ENST00000448604 THOC2Q8NI27 1593 aaKnown RBP21.6■■□□□ 1.05
GAL3ST1-220ENST00000448604 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
GAL3ST1-220ENST00000448604 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
GAL3ST1-220ENST00000448604 CCDC88BA6NC98 1476 aa21.46■■□□□ 1.03
GAL3ST1-220ENST00000448604 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.02
GAL3ST1-220ENST00000448604 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
GAL3ST1-220ENST00000448604 WDR62O43379 1518 aa21.42■■□□□ 1.02
GAL3ST1-220ENST00000448604 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
GAL3ST1-220ENST00000448604 PRDM2Q13029 1718 aa21.32■■□□□ 1
GAL3ST1-220ENST00000448604 URB2Q14146 1524 aaKnown RBP21.25■□□□□ 0.99
GAL3ST1-220ENST00000448604 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
GAL3ST1-220ENST00000448604 TOPBP1Q92547 1522 aa21.08■□□□□ 0.96
GAL3ST1-220ENST00000448604 IFT140Q96RY7 1462 aa21.02■□□□□ 0.96
GAL3ST1-220ENST00000448604 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
GAL3ST1-220ENST00000448604 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
GAL3ST1-220ENST00000448604 TARBP1Q13395 1621 aaKnown RBP20.91■□□□□ 0.94
GAL3ST1-220ENST00000448604 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
GAL3ST1-220ENST00000448604 ZNF608Q9ULD9 1512 aaPredicted RBP20.91■□□□□ 0.94
GAL3ST1-220ENST00000448604 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
GAL3ST1-220ENST00000448604 CUX1P39880 1505 aa20.82■□□□□ 0.92
GAL3ST1-220ENST00000448604 SOGA1O94964 1423 aa20.81■□□□□ 0.92
GAL3ST1-220ENST00000448604 AQRO60306 1485 aaKnown RBP eCLIP20.78■□□□□ 0.92
GAL3ST1-220ENST00000448604 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
GAL3ST1-220ENST00000448604 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
GAL3ST1-220ENST00000448604 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
GAL3ST1-220ENST00000448604 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
GAL3ST1-220ENST00000448604 TDRD9Q8NDG6 1382 aaKnown RBP20.7■□□□□ 0.9
GAL3ST1-220ENST00000448604 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
GAL3ST1-220ENST00000448604 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
GAL3ST1-220ENST00000448604 GRIN2BQ13224 1484 aa20.58■□□□□ 0.89
GAL3ST1-220ENST00000448604 BIVM-ERCC5R4GMW8 1640 aa20.58■□□□□ 0.89
GAL3ST1-220ENST00000448604 CHD1O14646 1710 aa20.58■□□□□ 0.88
GAL3ST1-220ENST00000448604 MAGI1Q96QZ7 1491 aaPredicted RBP20.57■□□□□ 0.88
GAL3ST1-220ENST00000448604 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
GAL3ST1-220ENST00000448604 GAPVD1Q14C86 1478 aa20.55■□□□□ 0.88
GAL3ST1-220ENST00000448604 TRIM41Q8WV44 630 aa20.53■□□□□ 0.88
GAL3ST1-220ENST00000448604 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
GAL3ST1-220ENST00000448604 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
GAL3ST1-220ENST00000448604 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
GAL3ST1-220ENST00000448604 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
GAL3ST1-220ENST00000448604 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
GAL3ST1-220ENST00000448604 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
GAL3ST1-220ENST00000448604 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
GAL3ST1-220ENST00000448604 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
GAL3ST1-220ENST00000448604 PBRM1Q86U86 1689 aa20.46■□□□□ 0.87
GAL3ST1-220ENST00000448604 FBLN2P98095 1184 aa20.46■□□□□ 0.87
GAL3ST1-220ENST00000448604 ARHGEF11O15085 1522 aa20.46■□□□□ 0.87
GAL3ST1-220ENST00000448604 CLASP1Q7Z460 1538 aa20.42■□□□□ 0.86
GAL3ST1-220ENST00000448604 ERICH3Q5RHP9 1530 aa20.37■□□□□ 0.85
GAL3ST1-220ENST00000448604 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.84
GAL3ST1-220ENST00000448604 NUP160Q12769 1436 aa20.3■□□□□ 0.84
GAL3ST1-220ENST00000448604 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
GAL3ST1-220ENST00000448604 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
GAL3ST1-220ENST00000448604 ARAP1Q96P48 1450 aa20.29■□□□□ 0.84
GAL3ST1-220ENST00000448604 ADAMTS12P58397 1594 aa20.28■□□□□ 0.84
GAL3ST1-220ENST00000448604 IGF1RP08069 1367 aa20.25■□□□□ 0.83
GAL3ST1-220ENST00000448604 CEP170Q5SW79 1584 aa20.19■□□□□ 0.82
GAL3ST1-220ENST00000448604 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
GAL3ST1-220ENST00000448604 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
GAL3ST1-220ENST00000448604 JPH4Q96JJ6 628 aa20.12■□□□□ 0.81
GAL3ST1-220ENST00000448604 CUL7Q14999 1698 aa20.06■□□□□ 0.8
GAL3ST1-220ENST00000448604 ERCC6L2Q5T890 1561 aa20.05■□□□□ 0.8
GAL3ST1-220ENST00000448604 CARMIL1Q5VZK9 1371 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms