RNA–Protein interactions for RNA: ENST00000448573.2

CNTNAP3-207, Transcript of contactin associated protein like 3, humanhuman

TSL 5

Gene CNTNAP3, Length 652 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-207ENST00000448573 NISCHQ9Y2I1 1504 aa54.85■■■■■ 6.37
CNTNAP3-207ENST00000448573 CCDC180Q9P1Z9 1646 aa49.15■■■■■ 5.46
CNTNAP3-207ENST00000448573 ABCC9O60706 1549 aa48.66■■■■■ 5.38
CNTNAP3-207ENST00000448573 RB1CC1Q8TDY2 1594 aa46.5■■■■■ 5.03
CNTNAP3-207ENST00000448573 NACADO15069 1562 aa46.25■■■■■ 4.99
CNTNAP3-207ENST00000448573 DCAF8L2P0C7V8 631 aa46■■■■■ 4.95
CNTNAP3-207ENST00000448573 MYO15BQ96JP2 1530 aa45.71■■■■■ 4.91
CNTNAP3-207ENST00000448573 UNC13AQ9UPW8 1703 aa45.64■■■■■ 4.9
CNTNAP3-207ENST00000448573 ZCCHC6Q5VYS8 1495 aaKnown RBP45.61■■■■■ 4.89
CNTNAP3-207ENST00000448573 DCAF1Q9Y4B6 1507 aa45.31■■■■■ 4.84
CNTNAP3-207ENST00000448573 PABPN1Q86U42 306 aaKnown RBP eCLIP45.28■■■■■ 4.84
CNTNAP3-207ENST00000448573 BICRAQ9NZM4 1560 aa45.18■■■■■ 4.82
CNTNAP3-207ENST00000448573 DNAJC5BQ9UF47 199 aa45.14■■■■■ 4.82
CNTNAP3-207ENST00000448573 SCRIBQ14160 1630 aa44.84■■■■■ 4.77
CNTNAP3-207ENST00000448573 SHROOM4Q9ULL8 1493 aa44.51■■■■■ 4.72
CNTNAP3-207ENST00000448573 CC2D2AQ9P2K1 1620 aa44.02■■■■■ 4.64
CNTNAP3-207ENST00000448573 EIF4G1Q04637 1599 aaKnown RBP44.01■■■■■ 4.64
CNTNAP3-207ENST00000448573 CECR2Q9BXF3 1484 aa43.74■■■■■ 4.59
CNTNAP3-207ENST00000448573 SMARCA4P51532 1647 aa42.79■■■■■ 4.44
CNTNAP3-207ENST00000448573 NCAPD3P42695 1498 aa42.62■■■■■ 4.41
CNTNAP3-207ENST00000448573 ATAD2BQ9ULI0 1458 aa42.62■■■■■ 4.41
CNTNAP3-207ENST00000448573 BAZ1AQ9NRL2 1556 aaPredicted RBP42.57■■■■■ 4.41
CNTNAP3-207ENST00000448573 SMARCA2P51531 1590 aa42.54■■■■■ 4.4
CNTNAP3-207ENST00000448573 HMGXB3Q12766 1538 aa42.46■■■■■ 4.39
CNTNAP3-207ENST00000448573 MROH2BQ7Z745 1585 aa42.32■■■■■ 4.37
CNTNAP3-207ENST00000448573 PEG3Q9GZU2 1588 aa42.31■■■■■ 4.36
CNTNAP3-207ENST00000448573 BAZ1BQ9UIG0 1483 aaKnown RBP42.26■■■■■ 4.36
CNTNAP3-207ENST00000448573 ERCC6Q03468 1493 aa41.95■■■■■ 4.31
CNTNAP3-207ENST00000448573 NESP48681 1621 aa41.95■■■■■ 4.31
CNTNAP3-207ENST00000448573 WIZO95785 1651 aa41.9■■■■■ 4.3
CNTNAP3-207ENST00000448573 CUX2O14529 1486 aa41.7■■■■■ 4.27
CNTNAP3-207ENST00000448573 LAMC3Q9Y6N6 1575 aa41.69■■■■■ 4.26
CNTNAP3-207ENST00000448573 KIF21AQ7Z4S6 1674 aa41.53■■■■■ 4.24
CNTNAP3-207ENST00000448573 RSF1Q96T23 1441 aaPredicted RBP41.52■■■■■ 4.24
CNTNAP3-207ENST00000448573 THOC2Q8NI27 1593 aaKnown RBP41.5■■■■■ 4.23
CNTNAP3-207ENST00000448573 TOP2AP11388 1531 aaKnown RBP41.35■■■■■ 4.21
CNTNAP3-207ENST00000448573 CADPSQ9ULU8 1353 aa41.34■■■■■ 4.21
CNTNAP3-207ENST00000448573 PDS5BQ9NTI5 1447 aa41.33■■■■■ 4.21
CNTNAP3-207ENST00000448573 DNAJC5Q9H3Z4 198 aa41.06■■■■■ 4.16
CNTNAP3-207ENST00000448573 MRC2Q9UBG0 1479 aa41.04■■■■■ 4.16
CNTNAP3-207ENST00000448573 CFTRP13569 1480 aa41.01■■■■■ 4.16
CNTNAP3-207ENST00000448573 CEP164Q9UPV0 1460 aa40.97■■■■■ 4.15
CNTNAP3-207ENST00000448573 WDR62O43379 1518 aa40.97■■■■■ 4.15
CNTNAP3-207ENST00000448573 FANCD2Q9BXW9 1451 aa40.96■■■■■ 4.15
CNTNAP3-207ENST00000448573 PRDM2Q13029 1718 aa40.87■■■■■ 4.13
CNTNAP3-207ENST00000448573 CCDC88BA6NC98 1476 aa40.81■■■■■ 4.12
CNTNAP3-207ENST00000448573 URB2Q14146 1524 aaKnown RBP40.62■■■■■ 4.09
CNTNAP3-207ENST00000448573 TOPBP1Q92547 1522 aa40.25■■■■■ 4.03
CNTNAP3-207ENST00000448573 DNMBPQ6XZF7 1577 aa40.17■■■■■ 4.02
CNTNAP3-207ENST00000448573 IFT140Q96RY7 1462 aa40.09■■■■■ 4.01
CNTNAP3-207ENST00000448573 ABCC8Q09428 1581 aa40.09■■■■■ 4.01
CNTNAP3-207ENST00000448573 ZNF608Q9ULD9 1512 aaPredicted RBP40.06■■■■■ 4
CNTNAP3-207ENST00000448573 SUPT5HO00267 1087 aaKnown RBP39.98■■■■□ 3.99
CNTNAP3-207ENST00000448573 EIF4G3O43432 1585 aaKnown RBP39.94■■■■□ 3.98
CNTNAP3-207ENST00000448573 TARBP1Q13395 1621 aaKnown RBP39.91■■■■□ 3.98
CNTNAP3-207ENST00000448573 POLA1P09884 1462 aaPredicted RBP39.87■■■■□ 3.97
CNTNAP3-207ENST00000448573 CUX1P39880 1505 aa39.75■■■■□ 3.95
CNTNAP3-207ENST00000448573 OSCARQ8IYS5 282 aa39.74■■■■□ 3.95
CNTNAP3-207ENST00000448573 RAD54L2Q9Y4B4 1467 aa39.71■■■■□ 3.95
CNTNAP3-207ENST00000448573 AQRO60306 1485 aaKnown RBP eCLIP39.69■■■■□ 3.94
CNTNAP3-207ENST00000448573 FGD5Q6ZNL6 1462 aa39.69■■■■□ 3.94
CNTNAP3-207ENST00000448573 CHD1O14646 1710 aa39.61■■■■□ 3.93
CNTNAP3-207ENST00000448573 SOGA1O94964 1423 aa39.61■■■■□ 3.93
CNTNAP3-207ENST00000448573 TRIM41Q8WV44 630 aa39.53■■■■□ 3.92
CNTNAP3-207ENST00000448573 WDR97A6NE52 1622 aa39.52■■■■□ 3.92
CNTNAP3-207ENST00000448573 TDRD9Q8NDG6 1382 aaKnown RBP39.49■■■■□ 3.91
CNTNAP3-207ENST00000448573 RIMBP3CA6NJZ7 1639 aa39.42■■■■□ 3.9
CNTNAP3-207ENST00000448573 RIMBP3BA6NNM3 1639 aa39.42■■■■□ 3.9
CNTNAP3-207ENST00000448573 RIMBP3Q9UFD9 1639 aa39.42■■■■□ 3.9
CNTNAP3-207ENST00000448573 SNAPC4Q5SXM2 1469 aa39.36■■■■□ 3.89
CNTNAP3-207ENST00000448573 PBRM1Q86U86 1689 aa39.32■■■■□ 3.89
CNTNAP3-207ENST00000448573 ARHGEF11O15085 1522 aa39.29■■■■□ 3.88
CNTNAP3-207ENST00000448573 FBLN2P98095 1184 aa39.28■■■■□ 3.88
CNTNAP3-207ENST00000448573 BIVM-ERCC5R4GMW8 1640 aa39.28■■■■□ 3.88
CNTNAP3-207ENST00000448573 GRIN2BQ13224 1484 aa39.25■■■■□ 3.87
CNTNAP3-207ENST00000448573 SYNJ1O43426 1573 aa39.25■■■■□ 3.87
CNTNAP3-207ENST00000448573 ABCA5Q8WWZ7 1642 aa39.24■■■■□ 3.87
CNTNAP3-207ENST00000448573 TOP2BQ02880 1626 aa39.23■■■■□ 3.87
CNTNAP3-207ENST00000448573 ABCA10Q8WWZ4 1543 aa39.23■■■■□ 3.87
CNTNAP3-207ENST00000448573 MAGI1Q96QZ7 1491 aaPredicted RBP39.23■■■■□ 3.87
CNTNAP3-207ENST00000448573 GAPVD1Q14C86 1478 aa39.18■■■■□ 3.86
CNTNAP3-207ENST00000448573 WRNQ14191 1432 aaPredicted RBP eCLIP39.17■■■■□ 3.86
CNTNAP3-207ENST00000448573 SYNJ2O15056 1496 aa39.09■■■■□ 3.85
CNTNAP3-207ENST00000448573 CLASP1Q7Z460 1538 aa39.07■■■■□ 3.84
CNTNAP3-207ENST00000448573 CHMP7Q8WUX9 453 aaPredicted RBP39.03■■■■□ 3.84
CNTNAP3-207ENST00000448573 ARAP1Q96P48 1450 aa38.93■■■■□ 3.82
CNTNAP3-207ENST00000448573 ADAMTS12P58397 1594 aa38.91■■■■□ 3.82
CNTNAP3-207ENST00000448573 CYB5RLQ6IPT4 315 aa38.83■■■■□ 3.81
CNTNAP3-207ENST00000448573 GRIN2AQ12879 1464 aa38.79■■■■□ 3.8
CNTNAP3-207ENST00000448573 ERICH3Q5RHP9 1530 aa38.75■■■■□ 3.79
CNTNAP3-207ENST00000448573 CEP170Q5SW79 1584 aa38.7■■■■□ 3.79
CNTNAP3-207ENST00000448573 FHAD1B1AJZ9 1412 aa38.67■■■■□ 3.78
CNTNAP3-207ENST00000448573 NUP160Q12769 1436 aa38.62■■■■□ 3.77
CNTNAP3-207ENST00000448573 ERCC6L2Q5T890 1561 aa38.53■■■■□ 3.76
CNTNAP3-207ENST00000448573 SHROOM2Q13796 1616 aa38.49■■■■□ 3.75
CNTNAP3-207ENST00000448573 RUSC2Q8N2Y8 1516 aa38.38■■■■□ 3.73
CNTNAP3-207ENST00000448573 KIF27Q86VH2 1401 aa38.37■■■■□ 3.73
CNTNAP3-207ENST00000448573 CUL7Q14999 1698 aa38.36■■■■□ 3.73
CNTNAP3-207ENST00000448573 TRHP20396 242 aaPredicted RBP38.26■■■■□ 3.72
CNTNAP3-207ENST00000448573 IGF1RP08069 1367 aa38.26■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms