RNA–Protein interactions for RNA: ENST00000448446.2

TULP1-205, Transcript of tubby like protein 1, humanhuman

TSL 3

Gene TULP1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP1-205ENST00000448446 NISCHQ9Y2I1 1504 aa49.55■■■■■ 5.52
TULP1-205ENST00000448446 ABCC9O60706 1549 aa44.41■■■■■ 4.7
TULP1-205ENST00000448446 CCDC180Q9P1Z9 1646 aa44.38■■■■■ 4.69
TULP1-205ENST00000448446 RB1CC1Q8TDY2 1594 aa42.29■■■■■ 4.36
TULP1-205ENST00000448446 DCAF8L2P0C7V8 631 aa42.1■■■■■ 4.33
TULP1-205ENST00000448446 NACADO15069 1562 aa42■■■■■ 4.31
TULP1-205ENST00000448446 DNAJC5BQ9UF47 199 aa41.49■■■■■ 4.23
TULP1-205ENST00000448446 PABPN1Q86U42 306 aaKnown RBP eCLIP41.42■■■■■ 4.22
TULP1-205ENST00000448446 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
TULP1-205ENST00000448446 UNC13AQ9UPW8 1703 aa41.15■■■■■ 4.18
TULP1-205ENST00000448446 ZCCHC6Q5VYS8 1495 aaKnown RBP41.05■■■■■ 4.16
TULP1-205ENST00000448446 BICRAQ9NZM4 1560 aa40.91■■■■■ 4.14
TULP1-205ENST00000448446 DCAF1Q9Y4B6 1507 aa40.89■■■■■ 4.14
TULP1-205ENST00000448446 SCRIBQ14160 1630 aa40.53■■■■■ 4.08
TULP1-205ENST00000448446 SHROOM4Q9ULL8 1493 aa40.46■■■■■ 4.07
TULP1-205ENST00000448446 CC2D2AQ9P2K1 1620 aa40.05■■■■■ 4
TULP1-205ENST00000448446 CECR2Q9BXF3 1484 aa40■■■■□ 3.99
TULP1-205ENST00000448446 EIF4G1Q04637 1599 aaKnown RBP39.98■■■■□ 3.99
TULP1-205ENST00000448446 NCAPD3P42695 1498 aa38.76■■■■□ 3.8
TULP1-205ENST00000448446 ATAD2BQ9ULI0 1458 aa38.66■■■■□ 3.78
TULP1-205ENST00000448446 SMARCA4P51532 1647 aa38.62■■■■□ 3.77
TULP1-205ENST00000448446 SMARCA2P51531 1590 aa38.6■■■■□ 3.77
TULP1-205ENST00000448446 BAZ1AQ9NRL2 1556 aaPredicted RBP38.5■■■■□ 3.75
TULP1-205ENST00000448446 HMGXB3Q12766 1538 aa38.46■■■■□ 3.75
TULP1-205ENST00000448446 ERCC6Q03468 1493 aa38.42■■■■□ 3.74
TULP1-205ENST00000448446 BAZ1BQ9UIG0 1483 aaKnown RBP38.36■■■■□ 3.73
TULP1-205ENST00000448446 CUX2O14529 1486 aa38.22■■■■□ 3.71
TULP1-205ENST00000448446 PEG3Q9GZU2 1588 aa38.19■■■■□ 3.7
TULP1-205ENST00000448446 MROH2BQ7Z745 1585 aa38.17■■■■□ 3.7
TULP1-205ENST00000448446 NESP48681 1621 aa38.12■■■■□ 3.69
TULP1-205ENST00000448446 DNAJC5Q9H3Z4 198 aa38.11■■■■□ 3.69
TULP1-205ENST00000448446 LAMC3Q9Y6N6 1575 aa37.89■■■■□ 3.66
TULP1-205ENST00000448446 PDS5BQ9NTI5 1447 aa37.76■■■■□ 3.63
TULP1-205ENST00000448446 WIZO95785 1651 aa37.72■■■■□ 3.63
TULP1-205ENST00000448446 CADPSQ9ULU8 1353 aa37.65■■■■□ 3.62
TULP1-205ENST00000448446 THOC2Q8NI27 1593 aaKnown RBP37.64■■■■□ 3.62
TULP1-205ENST00000448446 KIF21AQ7Z4S6 1674 aa37.58■■■■□ 3.61
TULP1-205ENST00000448446 RSF1Q96T23 1441 aaPredicted RBP37.44■■■■□ 3.58
TULP1-205ENST00000448446 MRC2Q9UBG0 1479 aa37.36■■■■□ 3.57
TULP1-205ENST00000448446 TOP2AP11388 1531 aaKnown RBP37.27■■■■□ 3.56
TULP1-205ENST00000448446 CEP164Q9UPV0 1460 aa37.26■■■■□ 3.56
TULP1-205ENST00000448446 FANCD2Q9BXW9 1451 aa37.22■■■■□ 3.55
TULP1-205ENST00000448446 WDR62O43379 1518 aa37.2■■■■□ 3.55
TULP1-205ENST00000448446 CFTRP13569 1480 aa37.18■■■■□ 3.54
TULP1-205ENST00000448446 CCDC88BA6NC98 1476 aa36.87■■■■□ 3.49
TULP1-205ENST00000448446 URB2Q14146 1524 aaKnown RBP36.83■■■■□ 3.49
TULP1-205ENST00000448446 PRDM2Q13029 1718 aa36.73■■■■□ 3.47
TULP1-205ENST00000448446 TRIM41Q8WV44 630 aa36.63■■■■□ 3.45
TULP1-205ENST00000448446 OSCARQ8IYS5 282 aa36.62■■■■□ 3.45
TULP1-205ENST00000448446 IFT140Q96RY7 1462 aa36.5■■■■□ 3.43
TULP1-205ENST00000448446 TOPBP1Q92547 1522 aa36.49■■■■□ 3.43
TULP1-205ENST00000448446 ABCC8Q09428 1581 aa36.49■■■■□ 3.43
TULP1-205ENST00000448446 ZNF608Q9ULD9 1512 aaPredicted RBP36.38■■■■□ 3.41
TULP1-205ENST00000448446 DNMBPQ6XZF7 1577 aa36.36■■■■□ 3.41
TULP1-205ENST00000448446 EIF4G3O43432 1585 aaKnown RBP36.17■■■■□ 3.38
TULP1-205ENST00000448446 AQRO60306 1485 aaKnown RBP eCLIP36.11■■■■□ 3.37
TULP1-205ENST00000448446 POLA1P09884 1462 aaPredicted RBP36.11■■■■□ 3.37
TULP1-205ENST00000448446 SUPT5HO00267 1087 aaKnown RBP36.09■■■■□ 3.37
TULP1-205ENST00000448446 TARBP1Q13395 1621 aaKnown RBP36.08■■■■□ 3.37
TULP1-205ENST00000448446 FBLN2P98095 1184 aa36.05■■■■□ 3.36
TULP1-205ENST00000448446 SOGA1O94964 1423 aa36.04■■■■□ 3.36
TULP1-205ENST00000448446 RAD54L2Q9Y4B4 1467 aa36■■■■□ 3.35
TULP1-205ENST00000448446 RIMBP3CA6NJZ7 1639 aa35.96■■■■□ 3.35
TULP1-205ENST00000448446 RIMBP3BA6NNM3 1639 aa35.96■■■■□ 3.35
TULP1-205ENST00000448446 RIMBP3Q9UFD9 1639 aa35.96■■■■□ 3.35
TULP1-205ENST00000448446 TDRD9Q8NDG6 1382 aaKnown RBP35.95■■■■□ 3.35
TULP1-205ENST00000448446 FGD5Q6ZNL6 1462 aa35.92■■■■□ 3.34
TULP1-205ENST00000448446 ARHGEF11O15085 1522 aa35.88■■■■□ 3.33
TULP1-205ENST00000448446 CHD1O14646 1710 aa35.86■■■■□ 3.33
TULP1-205ENST00000448446 CUX1P39880 1505 aa35.86■■■■□ 3.33
TULP1-205ENST00000448446 WDR97A6NE52 1622 aa35.77■■■■□ 3.32
TULP1-205ENST00000448446 CYB5RLQ6IPT4 315 aa35.76■■■■□ 3.32
TULP1-205ENST00000448446 CHMP7Q8WUX9 453 aaPredicted RBP35.76■■■■□ 3.32
TULP1-205ENST00000448446 SNAPC4Q5SXM2 1469 aa35.75■■■■□ 3.31
TULP1-205ENST00000448446 GRIN2BQ13224 1484 aa35.69■■■■□ 3.3
TULP1-205ENST00000448446 MAGI1Q96QZ7 1491 aaPredicted RBP35.66■■■■□ 3.3
TULP1-205ENST00000448446 GAPVD1Q14C86 1478 aa35.58■■■■□ 3.29
TULP1-205ENST00000448446 SYNJ1O43426 1573 aa35.55■■■■□ 3.28
TULP1-205ENST00000448446 SYNJ2O15056 1496 aa35.54■■■■□ 3.28
TULP1-205ENST00000448446 ARAP1Q96P48 1450 aa35.51■■■■□ 3.28
TULP1-205ENST00000448446 ABCA10Q8WWZ4 1543 aa35.5■■■■□ 3.27
TULP1-205ENST00000448446 WRNQ14191 1432 aaPredicted RBP eCLIP35.48■■■■□ 3.27
TULP1-205ENST00000448446 PBRM1Q86U86 1689 aa35.46■■■■□ 3.27
TULP1-205ENST00000448446 CLASP1Q7Z460 1538 aa35.44■■■■□ 3.26
TULP1-205ENST00000448446 TRHP20396 242 aaPredicted RBP35.43■■■■□ 3.26
TULP1-205ENST00000448446 ABCA5Q8WWZ7 1642 aa35.38■■■■□ 3.25
TULP1-205ENST00000448446 TOP2BQ02880 1626 aa35.32■■■■□ 3.24
TULP1-205ENST00000448446 BIVM-ERCC5R4GMW8 1640 aa35.28■■■■□ 3.24
TULP1-205ENST00000448446 GRIN2AQ12879 1464 aa35.2■■■■□ 3.23
TULP1-205ENST00000448446 ADAMTS12P58397 1594 aa35.14■■■■□ 3.22
TULP1-205ENST00000448446 FHAD1B1AJZ9 1412 aa35.14■■■■□ 3.22
TULP1-205ENST00000448446 ERICH3Q5RHP9 1530 aa35.07■■■■□ 3.21
TULP1-205ENST00000448446 NUP160Q12769 1436 aa35.03■■■■□ 3.2
TULP1-205ENST00000448446 CEP170Q5SW79 1584 aa35.01■■■■□ 3.2
TULP1-205ENST00000448446 ERCC6L2Q5T890 1561 aa34.9■■■■□ 3.18
TULP1-205ENST00000448446 SHROOM2Q13796 1616 aa34.81■■■■□ 3.16
TULP1-205ENST00000448446 JPH4Q96JJ6 628 aa34.81■■■■□ 3.16
TULP1-205ENST00000448446 PRG4Q92954 1404 aaPredicted RBP34.79■■■■□ 3.16
TULP1-205ENST00000448446 KIF27Q86VH2 1401 aa34.76■■■■□ 3.16
TULP1-205ENST00000448446 IGF1RP08069 1367 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms