RNA–Protein interactions for RNA: ENST00000448162.6

CCHCR1-207, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-207ENST00000448162 NISCHQ9Y2I1 1504 aa48.99■■■■■ 5.43
CCHCR1-207ENST00000448162 ABCC9O60706 1549 aa44.34■■■■■ 4.69
CCHCR1-207ENST00000448162 CCDC180Q9P1Z9 1646 aa44■■■■■ 4.63
CCHCR1-207ENST00000448162 RB1CC1Q8TDY2 1594 aa42.03■■■■■ 4.32
CCHCR1-207ENST00000448162 DNAJC5BQ9UF47 199 aa42.01■■■■■ 4.32
CCHCR1-207ENST00000448162 NACADO15069 1562 aa41.71■■■■■ 4.27
CCHCR1-207ENST00000448162 DCAF8L2P0C7V8 631 aa41.36■■■■■ 4.21
CCHCR1-207ENST00000448162 PABPN1Q86U42 306 aaKnown RBP eCLIP41.27■■■■■ 4.2
CCHCR1-207ENST00000448162 MYO15BQ96JP2 1530 aa41.1■■■■■ 4.17
CCHCR1-207ENST00000448162 UNC13AQ9UPW8 1703 aa41.09■■■■■ 4.17
CCHCR1-207ENST00000448162 BICRAQ9NZM4 1560 aa40.95■■■■■ 4.15
CCHCR1-207ENST00000448162 ZCCHC6Q5VYS8 1495 aaKnown RBP40.6■■■■■ 4.09
CCHCR1-207ENST00000448162 DCAF1Q9Y4B6 1507 aa40.46■■■■■ 4.07
CCHCR1-207ENST00000448162 SHROOM4Q9ULL8 1493 aa40.29■■■■■ 4.04
CCHCR1-207ENST00000448162 SCRIBQ14160 1630 aa40.08■■■■■ 4.01
CCHCR1-207ENST00000448162 CC2D2AQ9P2K1 1620 aa40.04■■■■■ 4
CCHCR1-207ENST00000448162 CECR2Q9BXF3 1484 aa39.98■■■■□ 3.99
CCHCR1-207ENST00000448162 EIF4G1Q04637 1599 aaKnown RBP39.9■■■■□ 3.98
CCHCR1-207ENST00000448162 DNAJC5Q9H3Z4 198 aa38.72■■■■□ 3.79
CCHCR1-207ENST00000448162 NCAPD3P42695 1498 aa38.58■■■■□ 3.77
CCHCR1-207ENST00000448162 ATAD2BQ9ULI0 1458 aa38.41■■■■□ 3.74
CCHCR1-207ENST00000448162 CUX2O14529 1486 aa38.33■■■■□ 3.73
CCHCR1-207ENST00000448162 SMARCA4P51532 1647 aa38.23■■■■□ 3.71
CCHCR1-207ENST00000448162 ERCC6Q03468 1493 aa38.22■■■■□ 3.71
CCHCR1-207ENST00000448162 HMGXB3Q12766 1538 aa38.21■■■■□ 3.71
CCHCR1-207ENST00000448162 SMARCA2P51531 1590 aa38.2■■■■□ 3.71
CCHCR1-207ENST00000448162 NESP48681 1621 aa38.05■■■■□ 3.68
CCHCR1-207ENST00000448162 BAZ1AQ9NRL2 1556 aaPredicted RBP37.99■■■■□ 3.67
CCHCR1-207ENST00000448162 BAZ1BQ9UIG0 1483 aaKnown RBP37.94■■■■□ 3.66
CCHCR1-207ENST00000448162 PEG3Q9GZU2 1588 aa37.93■■■■□ 3.66
CCHCR1-207ENST00000448162 MROH2BQ7Z745 1585 aa37.76■■■■□ 3.64
CCHCR1-207ENST00000448162 THOC2Q8NI27 1593 aaKnown RBP37.7■■■■□ 3.63
CCHCR1-207ENST00000448162 LAMC3Q9Y6N6 1575 aa37.68■■■■□ 3.62
CCHCR1-207ENST00000448162 KIF21AQ7Z4S6 1674 aa37.47■■■■□ 3.59
CCHCR1-207ENST00000448162 PDS5BQ9NTI5 1447 aa37.46■■■■□ 3.59
CCHCR1-207ENST00000448162 CADPSQ9ULU8 1353 aa37.37■■■■□ 3.57
CCHCR1-207ENST00000448162 WIZO95785 1651 aa37.24■■■■□ 3.55
CCHCR1-207ENST00000448162 MRC2Q9UBG0 1479 aa37.17■■■■□ 3.54
CCHCR1-207ENST00000448162 WDR62O43379 1518 aa37.12■■■■□ 3.53
CCHCR1-207ENST00000448162 RSF1Q96T23 1441 aaPredicted RBP37.11■■■■□ 3.53
CCHCR1-207ENST00000448162 CEP164Q9UPV0 1460 aa36.94■■■■□ 3.5
CCHCR1-207ENST00000448162 FANCD2Q9BXW9 1451 aa36.91■■■■□ 3.5
CCHCR1-207ENST00000448162 CFTRP13569 1480 aa36.9■■■■□ 3.5
CCHCR1-207ENST00000448162 TRIM41Q8WV44 630 aa36.78■■■■□ 3.48
CCHCR1-207ENST00000448162 TOP2AP11388 1531 aaKnown RBP36.75■■■■□ 3.47
CCHCR1-207ENST00000448162 URB2Q14146 1524 aaKnown RBP36.67■■■■□ 3.46
CCHCR1-207ENST00000448162 OSCARQ8IYS5 282 aa36.53■■■■□ 3.44
CCHCR1-207ENST00000448162 CCDC88BA6NC98 1476 aa36.38■■■■□ 3.41
CCHCR1-207ENST00000448162 PRDM2Q13029 1718 aa36.34■■■■□ 3.41
CCHCR1-207ENST00000448162 ZNF608Q9ULD9 1512 aaPredicted RBP36.28■■■■□ 3.4
CCHCR1-207ENST00000448162 IFT140Q96RY7 1462 aa36.24■■■■□ 3.39
CCHCR1-207ENST00000448162 TOPBP1Q92547 1522 aa36.19■■■■□ 3.38
CCHCR1-207ENST00000448162 RIMBP3CA6NJZ7 1639 aa36.08■■■■□ 3.37
CCHCR1-207ENST00000448162 RIMBP3BA6NNM3 1639 aa36.08■■■■□ 3.37
CCHCR1-207ENST00000448162 RIMBP3Q9UFD9 1639 aa36.08■■■■□ 3.37
CCHCR1-207ENST00000448162 ABCC8Q09428 1581 aa36.04■■■■□ 3.36
CCHCR1-207ENST00000448162 DNMBPQ6XZF7 1577 aa36■■■■□ 3.35
CCHCR1-207ENST00000448162 EIF4G3O43432 1585 aaKnown RBP35.98■■■■□ 3.35
CCHCR1-207ENST00000448162 ARHGEF11O15085 1522 aa35.97■■■■□ 3.35
CCHCR1-207ENST00000448162 TARBP1Q13395 1621 aaKnown RBP35.91■■■■□ 3.34
CCHCR1-207ENST00000448162 SUPT5HO00267 1087 aaKnown RBP35.91■■■■□ 3.34
CCHCR1-207ENST00000448162 AQRO60306 1485 aaKnown RBP eCLIP35.89■■■■□ 3.345e-15■■■■■ 50.5
CCHCR1-207ENST00000448162 POLA1P09884 1462 aaPredicted RBP35.82■■■■□ 3.32
CCHCR1-207ENST00000448162 CHD1O14646 1710 aa35.73■■■■□ 3.31
CCHCR1-207ENST00000448162 CYB5RLQ6IPT4 315 aa35.7■■■■□ 3.31
CCHCR1-207ENST00000448162 RAD54L2Q9Y4B4 1467 aa35.7■■■■□ 3.31
CCHCR1-207ENST00000448162 SOGA1O94964 1423 aa35.62■■■■□ 3.29
CCHCR1-207ENST00000448162 TDRD9Q8NDG6 1382 aaKnown RBP35.62■■■■□ 3.29
CCHCR1-207ENST00000448162 ARAP1Q96P48 1450 aa35.61■■■■□ 3.29
CCHCR1-207ENST00000448162 FBLN2P98095 1184 aa35.61■■■■□ 3.29
CCHCR1-207ENST00000448162 FGD5Q6ZNL6 1462 aa35.53■■■■□ 3.28
CCHCR1-207ENST00000448162 CUX1P39880 1505 aa35.48■■■■□ 3.27
CCHCR1-207ENST00000448162 SNAPC4Q5SXM2 1469 aa35.48■■■■□ 3.27
CCHCR1-207ENST00000448162 WDR97A6NE52 1622 aa35.46■■■■□ 3.27
CCHCR1-207ENST00000448162 CLASP1Q7Z460 1538 aa35.42■■■■□ 3.26
CCHCR1-207ENST00000448162 MAGI1Q96QZ7 1491 aaPredicted RBP35.36■■■■□ 3.25
CCHCR1-207ENST00000448162 GRIN2BQ13224 1484 aa35.34■■■■□ 3.25
CCHCR1-207ENST00000448162 CHMP7Q8WUX9 453 aaPredicted RBP35.33■■■■□ 3.25
CCHCR1-207ENST00000448162 TRHP20396 242 aaPredicted RBP35.32■■■■□ 3.24
CCHCR1-207ENST00000448162 SYNJ2O15056 1496 aa35.27■■■■□ 3.24
CCHCR1-207ENST00000448162 SYNJ1O43426 1573 aa35.26■■■■□ 3.24
CCHCR1-207ENST00000448162 GAPVD1Q14C86 1478 aa35.17■■■■□ 3.22
CCHCR1-207ENST00000448162 ABCA10Q8WWZ4 1543 aa35.12■■■■□ 3.21
CCHCR1-207ENST00000448162 PBRM1Q86U86 1689 aa35.11■■■■□ 3.21
CCHCR1-207ENST00000448162 ABCA5Q8WWZ7 1642 aa35.09■■■■□ 3.21
CCHCR1-207ENST00000448162 WRNQ14191 1432 aaPredicted RBP eCLIP34.92■■■■□ 3.18
CCHCR1-207ENST00000448162 BIVM-ERCC5R4GMW8 1640 aa34.91■■■■□ 3.18
CCHCR1-207ENST00000448162 TOP2BQ02880 1626 aa34.9■■■■□ 3.18
CCHCR1-207ENST00000448162 GRIN2AQ12879 1464 aa34.9■■■■□ 3.18
CCHCR1-207ENST00000448162 ERCC6L2Q5T890 1561 aa34.86■■■■□ 3.17
CCHCR1-207ENST00000448162 NUP160Q12769 1436 aa34.83■■■■□ 3.17
CCHCR1-207ENST00000448162 ADAMTS12P58397 1594 aa34.83■■■■□ 3.17
CCHCR1-207ENST00000448162 CEP170Q5SW79 1584 aa34.79■■■■□ 3.16
CCHCR1-207ENST00000448162 FHAD1B1AJZ9 1412 aa34.72■■■■□ 3.15
CCHCR1-207ENST00000448162 SHROOM2Q13796 1616 aa34.69■■■■□ 3.14
CCHCR1-207ENST00000448162 ERICH3Q5RHP9 1530 aa34.65■■■■□ 3.14
CCHCR1-207ENST00000448162 PRG4Q92954 1404 aaPredicted RBP34.47■■■■□ 3.11
CCHCR1-207ENST00000448162 AEBP2Q6ZN18 517 aaPredicted RBP34.45■■■■□ 3.11
CCHCR1-207ENST00000448162 JPH4Q96JJ6 628 aa34.44■■■■□ 3.1
CCHCR1-207ENST00000448162 RUSC2Q8N2Y8 1516 aa34.35■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms