RNA–Protein interactions for RNA: ENST00000447752.2

SYN2-204, Transcript of synapsin II, humanhuman

TSL 4

Gene SYN2, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-204ENST00000447752 NISCHQ9Y2I1 1504 aa45.3■■■■■ 4.84
SYN2-204ENST00000447752 CCDC180Q9P1Z9 1646 aa40.42■■■■■ 4.06
SYN2-204ENST00000447752 ABCC9O60706 1549 aa40.37■■■■■ 4.05
SYN2-204ENST00000447752 RB1CC1Q8TDY2 1594 aa38.42■■■■□ 3.74
SYN2-204ENST00000447752 DCAF8L2P0C7V8 631 aa38.29■■■■□ 3.72
SYN2-204ENST00000447752 NACADO15069 1562 aa38.22■■■■□ 3.71
SYN2-204ENST00000447752 DNAJC5BQ9UF47 199 aa37.79■■■■□ 3.64
SYN2-204ENST00000447752 MYO15BQ96JP2 1530 aa37.74■■■■□ 3.63
SYN2-204ENST00000447752 PABPN1Q86U42 306 aaKnown RBP eCLIP37.72■■■■□ 3.63
SYN2-204ENST00000447752 UNC13AQ9UPW8 1703 aa37.59■■■■□ 3.61
SYN2-204ENST00000447752 ZCCHC6Q5VYS8 1495 aaKnown RBP37.58■■■■□ 3.61
SYN2-204ENST00000447752 BICRAQ9NZM4 1560 aa37.37■■■■□ 3.57
SYN2-204ENST00000447752 DCAF1Q9Y4B6 1507 aa37.36■■■■□ 3.57
SYN2-204ENST00000447752 SCRIBQ14160 1630 aa36.98■■■■□ 3.51
SYN2-204ENST00000447752 SHROOM4Q9ULL8 1493 aa36.74■■■■□ 3.47
SYN2-204ENST00000447752 CC2D2AQ9P2K1 1620 aa36.44■■■■□ 3.42
SYN2-204ENST00000447752 EIF4G1Q04637 1599 aaKnown RBP36.4■■■■□ 3.42
SYN2-204ENST00000447752 CECR2Q9BXF3 1484 aa36.31■■■■□ 3.4
SYN2-204ENST00000447752 NCAPD3P42695 1498 aa35.33■■■■□ 3.25
SYN2-204ENST00000447752 ATAD2BQ9ULI0 1458 aa35.28■■■■□ 3.24
SYN2-204ENST00000447752 SMARCA4P51532 1647 aa35.26■■■■□ 3.24
SYN2-204ENST00000447752 SMARCA2P51531 1590 aa35.12■■■■□ 3.21
SYN2-204ENST00000447752 BAZ1AQ9NRL2 1556 aaPredicted RBP35.1■■■■□ 3.21
SYN2-204ENST00000447752 HMGXB3Q12766 1538 aa35.02■■■■□ 3.2
SYN2-204ENST00000447752 MROH2BQ7Z745 1585 aa34.96■■■■□ 3.19
SYN2-204ENST00000447752 BAZ1BQ9UIG0 1483 aaKnown RBP34.91■■■■□ 3.18
SYN2-204ENST00000447752 PEG3Q9GZU2 1588 aa34.88■■■■□ 3.17
SYN2-204ENST00000447752 ERCC6Q03468 1493 aa34.78■■■■□ 3.16
SYN2-204ENST00000447752 NESP48681 1621 aa34.77■■■■□ 3.16
SYN2-204ENST00000447752 CUX2O14529 1486 aa34.59■■■■□ 3.13
SYN2-204ENST00000447752 WIZO95785 1651 aa34.54■■■■□ 3.12
SYN2-204ENST00000447752 LAMC3Q9Y6N6 1575 aa34.44■■■■□ 3.1
SYN2-204ENST00000447752 DNAJC5Q9H3Z4 198 aa34.43■■■■□ 3.1
SYN2-204ENST00000447752 RSF1Q96T23 1441 aaPredicted RBP34.32■■■■□ 3.08
SYN2-204ENST00000447752 CADPSQ9ULU8 1353 aa34.3■■■■□ 3.08
SYN2-204ENST00000447752 PDS5BQ9NTI5 1447 aa34.28■■■■□ 3.08
SYN2-204ENST00000447752 THOC2Q8NI27 1593 aaKnown RBP34.27■■■■□ 3.08
SYN2-204ENST00000447752 KIF21AQ7Z4S6 1674 aa34.25■■■■□ 3.07
SYN2-204ENST00000447752 TOP2AP11388 1531 aaKnown RBP34.05■■■■□ 3.04
SYN2-204ENST00000447752 MRC2Q9UBG0 1479 aa33.96■■■■□ 3.03
SYN2-204ENST00000447752 CFTRP13569 1480 aa33.93■■■■□ 3.02
SYN2-204ENST00000447752 FANCD2Q9BXW9 1451 aa33.89■■■■□ 3.02
SYN2-204ENST00000447752 CEP164Q9UPV0 1460 aa33.87■■■■□ 3.01
SYN2-204ENST00000447752 WDR62O43379 1518 aa33.85■■■■□ 3.01
SYN2-204ENST00000447752 CCDC88BA6NC98 1476 aa33.75■■■□□ 2.99
SYN2-204ENST00000447752 URB2Q14146 1524 aaKnown RBP33.62■■■□□ 2.97
SYN2-204ENST00000447752 PRDM2Q13029 1718 aa33.5■■■□□ 2.95
SYN2-204ENST00000447752 TOPBP1Q92547 1522 aa33.28■■■□□ 2.92
SYN2-204ENST00000447752 ZNF608Q9ULD9 1512 aaPredicted RBP33.2■■■□□ 2.91
SYN2-204ENST00000447752 IFT140Q96RY7 1462 aa33.19■■■□□ 2.9
SYN2-204ENST00000447752 OSCARQ8IYS5 282 aa33.16■■■□□ 2.9
SYN2-204ENST00000447752 ABCC8Q09428 1581 aa33.15■■■□□ 2.9
SYN2-204ENST00000447752 DNMBPQ6XZF7 1577 aa33.13■■■□□ 2.89
SYN2-204ENST00000447752 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
SYN2-204ENST00000447752 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
SYN2-204ENST00000447752 POLA1P09884 1462 aaPredicted RBP32.95■■■□□ 2.87
SYN2-204ENST00000447752 AQRO60306 1485 aaKnown RBP eCLIP32.94■■■□□ 2.86
SYN2-204ENST00000447752 TARBP1Q13395 1621 aaKnown RBP32.94■■■□□ 2.86
SYN2-204ENST00000447752 EIF4G3O43432 1585 aaKnown RBP32.93■■■□□ 2.86
SYN2-204ENST00000447752 RAD54L2Q9Y4B4 1467 aa32.89■■■□□ 2.86
SYN2-204ENST00000447752 SOGA1O94964 1423 aa32.84■■■□□ 2.85
SYN2-204ENST00000447752 CUX1P39880 1505 aa32.81■■■□□ 2.84
SYN2-204ENST00000447752 FGD5Q6ZNL6 1462 aa32.79■■■□□ 2.84
SYN2-204ENST00000447752 TDRD9Q8NDG6 1382 aaKnown RBP32.78■■■□□ 2.84
SYN2-204ENST00000447752 FBLN2P98095 1184 aa32.7■■■□□ 2.83
SYN2-204ENST00000447752 RIMBP3CA6NJZ7 1639 aa32.66■■■□□ 2.82
SYN2-204ENST00000447752 RIMBP3BA6NNM3 1639 aa32.66■■■□□ 2.82
SYN2-204ENST00000447752 RIMBP3Q9UFD9 1639 aa32.66■■■□□ 2.82
SYN2-204ENST00000447752 CHD1O14646 1710 aa32.65■■■□□ 2.82
SYN2-204ENST00000447752 ARHGEF11O15085 1522 aa32.57■■■□□ 2.8
SYN2-204ENST00000447752 SNAPC4Q5SXM2 1469 aa32.56■■■□□ 2.8
SYN2-204ENST00000447752 WDR97A6NE52 1622 aa32.52■■■□□ 2.8
SYN2-204ENST00000447752 GRIN2BQ13224 1484 aa32.48■■■□□ 2.79
SYN2-204ENST00000447752 CHMP7Q8WUX9 453 aaPredicted RBP32.46■■■□□ 2.79
SYN2-204ENST00000447752 MAGI1Q96QZ7 1491 aaPredicted RBP32.42■■■□□ 2.78
SYN2-204ENST00000447752 CYB5RLQ6IPT4 315 aa32.42■■■□□ 2.78
SYN2-204ENST00000447752 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
SYN2-204ENST00000447752 ABCA10Q8WWZ4 1543 aa32.41■■■□□ 2.78
SYN2-204ENST00000447752 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
SYN2-204ENST00000447752 SYNJ2O15056 1496 aa32.33■■■□□ 2.77
SYN2-204ENST00000447752 PBRM1Q86U86 1689 aa32.33■■■□□ 2.77
SYN2-204ENST00000447752 ABCA5Q8WWZ7 1642 aa32.31■■■□□ 2.76
SYN2-204ENST00000447752 SYNJ1O43426 1573 aa32.31■■■□□ 2.76
SYN2-204ENST00000447752 TOP2BQ02880 1626 aa32.29■■■□□ 2.76
SYN2-204ENST00000447752 ARAP1Q96P48 1450 aa32.29■■■□□ 2.76
SYN2-204ENST00000447752 CLASP1Q7Z460 1538 aa32.29■■■□□ 2.76
SYN2-204ENST00000447752 BIVM-ERCC5R4GMW8 1640 aa32.28■■■□□ 2.76
SYN2-204ENST00000447752 GRIN2AQ12879 1464 aa32.06■■■□□ 2.72
SYN2-204ENST00000447752 ADAMTS12P58397 1594 aa32.05■■■□□ 2.72
SYN2-204ENST00000447752 FHAD1B1AJZ9 1412 aa32■■■□□ 2.71
SYN2-204ENST00000447752 ERICH3Q5RHP9 1530 aa31.97■■■□□ 2.71
SYN2-204ENST00000447752 TRHP20396 242 aaPredicted RBP31.96■■■□□ 2.71
SYN2-204ENST00000447752 CEP170Q5SW79 1584 aa31.96■■■□□ 2.71
SYN2-204ENST00000447752 NUP160Q12769 1436 aa31.95■■■□□ 2.71
SYN2-204ENST00000447752 ERCC6L2Q5T890 1561 aa31.9■■■□□ 2.7
SYN2-204ENST00000447752 SHROOM2Q13796 1616 aa31.75■■■□□ 2.67
SYN2-204ENST00000447752 IGF1RP08069 1367 aa31.73■■■□□ 2.67
SYN2-204ENST00000447752 JPH4Q96JJ6 628 aa31.71■■■□□ 2.67
SYN2-204ENST00000447752 KIF27Q86VH2 1401 aa31.69■■■□□ 2.66
SYN2-204ENST00000447752 PRG4Q92954 1404 aaPredicted RBP31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms