RNA–Protein interactions for RNA: ENST00000447708.2

PMS2P10-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 10, humanhuman

BASIC

Gene PMS2P10, Length 612 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P10-201ENST00000447708 NISCHQ9Y2I1 1504 aa22.01■■□□□ 1.11
PMS2P10-201ENST00000447708 AEBP2Q6ZN18 517 aaPredicted RBP21.19■□□□□ 0.98
PMS2P10-201ENST00000447708 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
PMS2P10-201ENST00000447708 CCDC180Q9P1Z9 1646 aa19.68■□□□□ 0.74
PMS2P10-201ENST00000447708 ABCC9O60706 1549 aa19.2■□□□□ 0.66
PMS2P10-201ENST00000447708 NACADO15069 1562 aa18.59■□□□□ 0.57
PMS2P10-201ENST00000447708 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
PMS2P10-201ENST00000447708 MYO15BQ96JP2 1530 aa18.57■□□□□ 0.56
PMS2P10-201ENST00000447708 DCAF1Q9Y4B6 1507 aa18.38■□□□□ 0.53
PMS2P10-201ENST00000447708 ZCCHC6Q5VYS8 1495 aaKnown RBP18.33■□□□□ 0.52
PMS2P10-201ENST00000447708 DCAF8L2P0C7V8 631 aa18.26■□□□□ 0.51
PMS2P10-201ENST00000447708 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
PMS2P10-201ENST00000447708 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
PMS2P10-201ENST00000447708 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
PMS2P10-201ENST00000447708 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
PMS2P10-201ENST00000447708 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
PMS2P10-201ENST00000447708 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
PMS2P10-201ENST00000447708 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
PMS2P10-201ENST00000447708 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
PMS2P10-201ENST00000447708 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
PMS2P10-201ENST00000447708 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
PMS2P10-201ENST00000447708 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
PMS2P10-201ENST00000447708 NCAPD3P42695 1498 aa17.16■□□□□ 0.34
PMS2P10-201ENST00000447708 BAZ1AQ9NRL2 1556 aaPredicted RBP17.12■□□□□ 0.33
PMS2P10-201ENST00000447708 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
PMS2P10-201ENST00000447708 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
PMS2P10-201ENST00000447708 SMARCA4P51532 1647 aa17.06■□□□□ 0.32
PMS2P10-201ENST00000447708 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
PMS2P10-201ENST00000447708 PEG3Q9GZU2 1588 aa17.03■□□□□ 0.32
PMS2P10-201ENST00000447708 BAZ1BQ9UIG0 1483 aaKnown RBP16.91■□□□□ 0.3
PMS2P10-201ENST00000447708 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
PMS2P10-201ENST00000447708 FOXD1Q16676 465 aa16.84■□□□□ 0.29
PMS2P10-201ENST00000447708 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
PMS2P10-201ENST00000447708 LAMC3Q9Y6N6 1575 aa16.69■□□□□ 0.26
PMS2P10-201ENST00000447708 CUX2O14529 1486 aa16.67■□□□□ 0.26
PMS2P10-201ENST00000447708 ERCC6Q03468 1493 aa16.67■□□□□ 0.26
PMS2P10-201ENST00000447708 PDS5BQ9NTI5 1447 aa16.63■□□□□ 0.25
PMS2P10-201ENST00000447708 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
PMS2P10-201ENST00000447708 WIZO95785 1651 aa16.59■□□□□ 0.25
PMS2P10-201ENST00000447708 TOP2AP11388 1531 aaKnown RBP16.58■□□□□ 0.24
PMS2P10-201ENST00000447708 NESP48681 1621 aa16.52■□□□□ 0.24
PMS2P10-201ENST00000447708 CFTRP13569 1480 aa16.49■□□□□ 0.23
PMS2P10-201ENST00000447708 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
PMS2P10-201ENST00000447708 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
PMS2P10-201ENST00000447708 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
PMS2P10-201ENST00000447708 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
PMS2P10-201ENST00000447708 WDR62O43379 1518 aa16.35■□□□□ 0.21
PMS2P10-201ENST00000447708 CCDC88BA6NC98 1476 aa16.33■□□□□ 0.2
PMS2P10-201ENST00000447708 KIF21AQ7Z4S6 1674 aa16.32■□□□□ 0.2
PMS2P10-201ENST00000447708 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
PMS2P10-201ENST00000447708 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
PMS2P10-201ENST00000447708 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
PMS2P10-201ENST00000447708 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.18
PMS2P10-201ENST00000447708 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
PMS2P10-201ENST00000447708 DNMBPQ6XZF7 1577 aa16.07■□□□□ 0.16
PMS2P10-201ENST00000447708 TOPBP1Q92547 1522 aa16.06■□□□□ 0.16
PMS2P10-201ENST00000447708 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
PMS2P10-201ENST00000447708 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
PMS2P10-201ENST00000447708 POLA1P09884 1462 aaPredicted RBP15.92■□□□□ 0.14
PMS2P10-201ENST00000447708 OSCARQ8IYS5 282 aa15.91■□□□□ 0.14
PMS2P10-201ENST00000447708 PLPPR3Q6T4P5 718 aa15.89■□□□□ 0.13
PMS2P10-201ENST00000447708 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
PMS2P10-201ENST00000447708 SOGA1O94964 1423 aa15.87■□□□□ 0.13
PMS2P10-201ENST00000447708 CUX1P39880 1505 aa15.84■□□□□ 0.13
PMS2P10-201ENST00000447708 ZNF608Q9ULD9 1512 aaPredicted RBP15.84■□□□□ 0.13
PMS2P10-201ENST00000447708 FGD5Q6ZNL6 1462 aa15.83■□□□□ 0.12
PMS2P10-201ENST00000447708 EIF4G3O43432 1585 aaKnown RBP15.81■□□□□ 0.12
PMS2P10-201ENST00000447708 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.12
PMS2P10-201ENST00000447708 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
PMS2P10-201ENST00000447708 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.11
PMS2P10-201ENST00000447708 MAGI1Q96QZ7 1491 aaPredicted RBP15.77■□□□□ 0.11
PMS2P10-201ENST00000447708 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
PMS2P10-201ENST00000447708 RAD54L2Q9Y4B4 1467 aa15.75■□□□□ 0.11
PMS2P10-201ENST00000447708 TOP2BQ02880 1626 aa15.73■□□□□ 0.11
PMS2P10-201ENST00000447708 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
PMS2P10-201ENST00000447708 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
PMS2P10-201ENST00000447708 MSH5O43196 834 aa15.71■□□□□ 0.11
PMS2P10-201ENST00000447708 BIVM-ERCC5R4GMW8 1640 aa15.71■□□□□ 0.11
PMS2P10-201ENST00000447708 GAPVD1Q14C86 1478 aa15.71■□□□□ 0.1
PMS2P10-201ENST00000447708 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
PMS2P10-201ENST00000447708 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
PMS2P10-201ENST00000447708 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
PMS2P10-201ENST00000447708 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
PMS2P10-201ENST00000447708 ABCA5Q8WWZ7 1642 aa15.64■□□□□ 0.09
PMS2P10-201ENST00000447708 ADRA2BP18089 450 aa15.63■□□□□ 0.09
PMS2P10-201ENST00000447708 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
PMS2P10-201ENST00000447708 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
PMS2P10-201ENST00000447708 FBLN2P98095 1184 aa15.58■□□□□ 0.08
PMS2P10-201ENST00000447708 FHAD1B1AJZ9 1412 aa15.57■□□□□ 0.08
PMS2P10-201ENST00000447708 ARHGEF11O15085 1522 aa15.56■□□□□ 0.08
PMS2P10-201ENST00000447708 CHD1O14646 1710 aa15.55■□□□□ 0.08
PMS2P10-201ENST00000447708 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
PMS2P10-201ENST00000447708 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
PMS2P10-201ENST00000447708 CLASP1Q7Z460 1538 aa15.53■□□□□ 0.08
PMS2P10-201ENST00000447708 GRIN2AQ12879 1464 aa15.52■□□□□ 0.07
PMS2P10-201ENST00000447708 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
PMS2P10-201ENST00000447708 NUP160Q12769 1436 aa15.5■□□□□ 0.07
PMS2P10-201ENST00000447708 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
PMS2P10-201ENST00000447708 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
PMS2P10-201ENST00000447708 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms