RNA–Protein interactions for RNA: ENST00000447678.2

LPA-202, Transcript of lipoprotein(a), humanhuman

TSL 5 BASIC

Gene LPA, Length 1,839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPA-202ENST00000447678 NISCHQ9Y2I1 1504 aa23.07■■□□□ 1.28
LPA-202ENST00000447678 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
LPA-202ENST00000447678 ABCC9O60706 1549 aa20.46■□□□□ 0.87
LPA-202ENST00000447678 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
LPA-202ENST00000447678 NACADO15069 1562 aa19.48■□□□□ 0.71
LPA-202ENST00000447678 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
LPA-202ENST00000447678 MYO15BQ96JP2 1530 aa19.28■□□□□ 0.68
LPA-202ENST00000447678 ZCCHC6Q5VYS8 1495 aaKnown RBP19.14■□□□□ 0.66
LPA-202ENST00000447678 PABPN1Q86U42 306 aaKnown RBP eCLIP19.11■□□□□ 0.65
LPA-202ENST00000447678 DCAF1Q9Y4B6 1507 aa19.08■□□□□ 0.65
LPA-202ENST00000447678 UNC13AQ9UPW8 1703 aa19.04■□□□□ 0.64
LPA-202ENST00000447678 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
LPA-202ENST00000447678 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
LPA-202ENST00000447678 SCRIBQ14160 1630 aa18.79■□□□□ 0.6
LPA-202ENST00000447678 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
LPA-202ENST00000447678 EIF4G1Q04637 1599 aaKnown RBP18.49■□□□□ 0.55
LPA-202ENST00000447678 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
LPA-202ENST00000447678 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
LPA-202ENST00000447678 NCAPD3P42695 1498 aa17.98■□□□□ 0.47
LPA-202ENST00000447678 SMARCA4P51532 1647 aa17.95■□□□□ 0.46
LPA-202ENST00000447678 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
LPA-202ENST00000447678 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
LPA-202ENST00000447678 BAZ1AQ9NRL2 1556 aaPredicted RBP17.92■□□□□ 0.46
LPA-202ENST00000447678 HMGXB3Q12766 1538 aa17.85■□□□□ 0.45
LPA-202ENST00000447678 BAZ1BQ9UIG0 1483 aaKnown RBP17.79■□□□□ 0.44
LPA-202ENST00000447678 PEG3Q9GZU2 1588 aa17.78■□□□□ 0.44
LPA-202ENST00000447678 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
LPA-202ENST00000447678 ERCC6Q03468 1493 aa17.7■□□□□ 0.42
LPA-202ENST00000447678 NESP48681 1621 aa17.61■□□□□ 0.41
LPA-202ENST00000447678 CUX2O14529 1486 aa17.59■□□□□ 0.41
LPA-202ENST00000447678 WIZO95785 1651 aa17.54■□□□□ 0.4
LPA-202ENST00000447678 LAMC3Q9Y6N6 1575 aa17.54■□□□□ 0.4
LPA-202ENST00000447678 RSF1Q96T23 1441 aaPredicted RBP17.49■□□□□ 0.39
LPA-202ENST00000447678 PDS5BQ9NTI5 1447 aa17.48■□□□□ 0.39
LPA-202ENST00000447678 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
LPA-202ENST00000447678 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
LPA-202ENST00000447678 THOC2Q8NI27 1593 aaKnown RBP17.37■□□□□ 0.37
LPA-202ENST00000447678 TOP2AP11388 1531 aaKnown RBP17.37■□□□□ 0.37
LPA-202ENST00000447678 KIF21AQ7Z4S6 1674 aa17.36■□□□□ 0.37
LPA-202ENST00000447678 CFTRP13569 1480 aa17.28■□□□□ 0.36
LPA-202ENST00000447678 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
LPA-202ENST00000447678 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
LPA-202ENST00000447678 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
LPA-202ENST00000447678 WDR62O43379 1518 aa17.21■□□□□ 0.35
LPA-202ENST00000447678 CCDC88BA6NC98 1476 aa17.17■□□□□ 0.34
LPA-202ENST00000447678 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
LPA-202ENST00000447678 URB2Q14146 1524 aaKnown RBP17.07■□□□□ 0.32
LPA-202ENST00000447678 ABCC8Q09428 1581 aa16.96■□□□□ 0.3
LPA-202ENST00000447678 TOPBP1Q92547 1522 aa16.93■□□□□ 0.3
LPA-202ENST00000447678 IFT140Q96RY7 1462 aa16.92■□□□□ 0.3
LPA-202ENST00000447678 SUPT5HO00267 1087 aaKnown RBP16.89■□□□□ 0.29
LPA-202ENST00000447678 DNMBPQ6XZF7 1577 aa16.88■□□□□ 0.29
LPA-202ENST00000447678 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
LPA-202ENST00000447678 ZNF608Q9ULD9 1512 aaPredicted RBP16.83■□□□□ 0.28
LPA-202ENST00000447678 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
LPA-202ENST00000447678 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
LPA-202ENST00000447678 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
LPA-202ENST00000447678 SOGA1O94964 1423 aa16.73■□□□□ 0.27
LPA-202ENST00000447678 AQRO60306 1485 aaKnown RBP eCLIP16.72■□□□□ 0.27
LPA-202ENST00000447678 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
LPA-202ENST00000447678 RAD54L2Q9Y4B4 1467 aa16.69■□□□□ 0.26
LPA-202ENST00000447678 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
LPA-202ENST00000447678 CUX1P39880 1505 aa16.68■□□□□ 0.26
LPA-202ENST00000447678 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
LPA-202ENST00000447678 FBLN2P98095 1184 aa16.63■□□□□ 0.25
LPA-202ENST00000447678 WDR97A6NE52 1622 aa16.62■□□□□ 0.25
LPA-202ENST00000447678 CHD1O14646 1710 aa16.56■□□□□ 0.24
LPA-202ENST00000447678 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
LPA-202ENST00000447678 CHMP7Q8WUX9 453 aaPredicted RBP16.55■□□□□ 0.24
LPA-202ENST00000447678 SNAPC4Q5SXM2 1469 aa16.55■□□□□ 0.24
LPA-202ENST00000447678 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
LPA-202ENST00000447678 RIMBP3CA6NJZ7 1639 aa16.53■□□□□ 0.24
LPA-202ENST00000447678 RIMBP3BA6NNM3 1639 aa16.53■□□□□ 0.24
LPA-202ENST00000447678 RIMBP3Q9UFD9 1639 aa16.53■□□□□ 0.24
LPA-202ENST00000447678 ARHGEF11O15085 1522 aa16.52■□□□□ 0.24
LPA-202ENST00000447678 WRNQ14191 1432 aaPredicted RBP eCLIP16.52■□□□□ 0.24
LPA-202ENST00000447678 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.23
LPA-202ENST00000447678 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.23
LPA-202ENST00000447678 SYNJ2O15056 1496 aa16.47■□□□□ 0.23
LPA-202ENST00000447678 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
LPA-202ENST00000447678 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
LPA-202ENST00000447678 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
LPA-202ENST00000447678 ABCA5Q8WWZ7 1642 aa16.44■□□□□ 0.22
LPA-202ENST00000447678 CYB5RLQ6IPT4 315 aa16.44■□□□□ 0.22
LPA-202ENST00000447678 PBRM1Q86U86 1689 aa16.44■□□□□ 0.22
LPA-202ENST00000447678 CLASP1Q7Z460 1538 aa16.39■□□□□ 0.21
LPA-202ENST00000447678 ARAP1Q96P48 1450 aa16.36■□□□□ 0.21
LPA-202ENST00000447678 FHAD1B1AJZ9 1412 aa16.33■□□□□ 0.2
LPA-202ENST00000447678 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
LPA-202ENST00000447678 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
LPA-202ENST00000447678 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
LPA-202ENST00000447678 NUP160Q12769 1436 aa16.26■□□□□ 0.19
LPA-202ENST00000447678 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
LPA-202ENST00000447678 CEP170Q5SW79 1584 aa16.22■□□□□ 0.19
LPA-202ENST00000447678 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
LPA-202ENST00000447678 IGF1RP08069 1367 aa16.16■□□□□ 0.18
LPA-202ENST00000447678 JPH4Q96JJ6 628 aa16.15■□□□□ 0.18
LPA-202ENST00000447678 SHROOM2Q13796 1616 aa16.14■□□□□ 0.17
LPA-202ENST00000447678 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
LPA-202ENST00000447678 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms