RNA–Protein interactions for RNA: ENST00000447456.1

CCDC18-205, Transcript of coiled-coil domain containing 18, humanhuman

TSL 1 (best)

Gene CCDC18, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-205ENST00000447456 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.05
CCDC18-205ENST00000447456 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
CCDC18-205ENST00000447456 AEBP2Q6ZN18 517 aaPredicted RBP18.35■□□□□ 0.53
CCDC18-205ENST00000447456 ABCC9O60706 1549 aa18.34■□□□□ 0.53
CCDC18-205ENST00000447456 ZCCHC6Q5VYS8 1495 aaKnown RBP18.08■□□□□ 0.49
CCDC18-205ENST00000447456 DCAF8L2P0C7V8 631 aa17.98■□□□□ 0.47
CCDC18-205ENST00000447456 DCAF1Q9Y4B6 1507 aa17.94■□□□□ 0.46
CCDC18-205ENST00000447456 MYO15BQ96JP2 1530 aa17.9■□□□□ 0.46
CCDC18-205ENST00000447456 NACADO15069 1562 aa17.9■□□□□ 0.46
CCDC18-205ENST00000447456 RB1CC1Q8TDY2 1594 aa17.84■□□□□ 0.45
CCDC18-205ENST00000447456 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
CCDC18-205ENST00000447456 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
CCDC18-205ENST00000447456 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
CCDC18-205ENST00000447456 SHROOM4Q9ULL8 1493 aa17.28■□□□□ 0.36
CCDC18-205ENST00000447456 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
CCDC18-205ENST00000447456 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCDC18-205ENST00000447456 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
CCDC18-205ENST00000447456 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
CCDC18-205ENST00000447456 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
CCDC18-205ENST00000447456 SMARCA4P51532 1647 aa16.71■□□□□ 0.27
CCDC18-205ENST00000447456 MROH2BQ7Z745 1585 aa16.65■□□□□ 0.26
CCDC18-205ENST00000447456 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
CCDC18-205ENST00000447456 CC2D2AQ9P2K1 1620 aa16.6■□□□□ 0.25
CCDC18-205ENST00000447456 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
CCDC18-205ENST00000447456 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
CCDC18-205ENST00000447456 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
CCDC18-205ENST00000447456 NCAPD3P42695 1498 aa16.49■□□□□ 0.23
CCDC18-205ENST00000447456 WIZO95785 1651 aa16.48■□□□□ 0.23
CCDC18-205ENST00000447456 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
CCDC18-205ENST00000447456 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
CCDC18-205ENST00000447456 BAZ1BQ9UIG0 1483 aaKnown RBP16.45■□□□□ 0.22
CCDC18-205ENST00000447456 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
CCDC18-205ENST00000447456 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
CCDC18-205ENST00000447456 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
CCDC18-205ENST00000447456 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
CCDC18-205ENST00000447456 LAMC3Q9Y6N6 1575 aa16.02■□□□□ 0.16
CCDC18-205ENST00000447456 CFTRP13569 1480 aa16■□□□□ 0.15
CCDC18-205ENST00000447456 NESP48681 1621 aa15.94■□□□□ 0.14
CCDC18-205ENST00000447456 PDS5BQ9NTI5 1447 aa15.94■□□□□ 0.14
CCDC18-205ENST00000447456 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
CCDC18-205ENST00000447456 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
CCDC18-205ENST00000447456 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
CCDC18-205ENST00000447456 CEP164Q9UPV0 1460 aa15.82■□□□□ 0.12
CCDC18-205ENST00000447456 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.12
CCDC18-205ENST00000447456 MRC2Q9UBG0 1479 aa15.71■□□□□ 0.11
CCDC18-205ENST00000447456 ABCC8Q09428 1581 aa15.71■□□□□ 0.11
CCDC18-205ENST00000447456 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
CCDC18-205ENST00000447456 DNMBPQ6XZF7 1577 aa15.65■□□□□ 0.1
CCDC18-205ENST00000447456 URB2Q14146 1524 aaKnown RBP15.64■□□□□ 0.09
CCDC18-205ENST00000447456 THOC2Q8NI27 1593 aaKnown RBP15.63■□□□□ 0.09
CCDC18-205ENST00000447456 WDR62O43379 1518 aa15.63■□□□□ 0.09
CCDC18-205ENST00000447456 CUX1P39880 1505 aa15.62■□□□□ 0.09
CCDC18-205ENST00000447456 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
CCDC18-205ENST00000447456 TOP2BQ02880 1626 aa15.59■□□□□ 0.09
CCDC18-205ENST00000447456 TRIM41Q8WV44 630 aa15.58■□□□□ 0.08
CCDC18-205ENST00000447456 BIVM-ERCC5R4GMW8 1640 aa15.57■□□□□ 0.08
CCDC18-205ENST00000447456 SENP3Q9H4L4 574 aaPredicted RBP15.57■□□□□ 0.08
CCDC18-205ENST00000447456 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
CCDC18-205ENST00000447456 CUX2O14529 1486 aa15.54■□□□□ 0.08
CCDC18-205ENST00000447456 FGD5Q6ZNL6 1462 aa15.52■□□□□ 0.07
CCDC18-205ENST00000447456 POLA1P09884 1462 aaPredicted RBP15.51■□□□□ 0.07
CCDC18-205ENST00000447456 SOGA1O94964 1423 aa15.48■□□□□ 0.07
CCDC18-205ENST00000447456 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
CCDC18-205ENST00000447456 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
CCDC18-205ENST00000447456 ABCA10Q8WWZ4 1543 aa15.41■□□□□ 0.06
CCDC18-205ENST00000447456 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
CCDC18-205ENST00000447456 PHF23Q9BUL5 403 aaPredicted RBP15.4■□□□□ 0.06
CCDC18-205ENST00000447456 WDR97A6NE52 1622 aa15.37■□□□□ 0.05
CCDC18-205ENST00000447456 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
CCDC18-205ENST00000447456 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.04
CCDC18-205ENST00000447456 ZNF608Q9ULD9 1512 aaPredicted RBP15.32■□□□□ 0.04
CCDC18-205ENST00000447456 EEA1Q15075 1411 aa15.31■□□□□ 0.04
CCDC18-205ENST00000447456 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
CCDC18-205ENST00000447456 AQRO60306 1485 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC18-205ENST00000447456 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
CCDC18-205ENST00000447456 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
CCDC18-205ENST00000447456 GRIN2BQ13224 1484 aa15.27■□□□□ 0.04
CCDC18-205ENST00000447456 ERICH3Q5RHP9 1530 aa15.24■□□□□ 0.03
CCDC18-205ENST00000447456 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
CCDC18-205ENST00000447456 RUSC2Q8N2Y8 1516 aa15.21■□□□□ 0.03
CCDC18-205ENST00000447456 IGF1RP08069 1367 aa15.21■□□□□ 0.02
CCDC18-205ENST00000447456 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
CCDC18-205ENST00000447456 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
CCDC18-205ENST00000447456 FAM9AQ8IZU1 332 aaPredicted RBP15.19■□□□□ 0.02
CCDC18-205ENST00000447456 CUL7Q14999 1698 aa15.17■□□□□ 0.02
CCDC18-205ENST00000447456 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
CCDC18-205ENST00000447456 FHAD1B1AJZ9 1412 aa15.16■□□□□ 0.02
CCDC18-205ENST00000447456 CARMIL1Q5VZK9 1371 aa15.15■□□□□ 0.02
CCDC18-205ENST00000447456 CHMP7Q8WUX9 453 aaPredicted RBP15.13■□□□□ 0.01
CCDC18-205ENST00000447456 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
CCDC18-205ENST00000447456 SYNJ2O15056 1496 aa15.12■□□□□ 0.01
CCDC18-205ENST00000447456 FBLN2P98095 1184 aa15.1■□□□□ 0.01
CCDC18-205ENST00000447456 PRXQ9BXM0 1461 aa15.09■□□□□ 0.01
CCDC18-205ENST00000447456 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
CCDC18-205ENST00000447456 KIF21BO75037 1637 aa15.06■□□□□ 0
CCDC18-205ENST00000447456 GRIN2AQ12879 1464 aa15.05■□□□□ -0
CCDC18-205ENST00000447456 GOLGA3Q08378 1498 aa15.02■□□□□ -0
CCDC18-205ENST00000447456 CHD1O14646 1710 aa15.02□□□□□ -0.01
CCDC18-205ENST00000447456 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
CCDC18-205ENST00000447456 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms