RNA–Protein interactions for RNA: ENST00000447379.1

NEK6-210, Transcript of NIMA related kinase 6, humanhuman

TSL 5

Gene NEK6, Length 716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-210ENST00000447379 NISCHQ9Y2I1 1504 aa40.23■■■■■ 4.03
NEK6-210ENST00000447379 CCDC180Q9P1Z9 1646 aa35.77■■■■□ 3.32
NEK6-210ENST00000447379 ABCC9O60706 1549 aa35.01■■■■□ 3.2
NEK6-210ENST00000447379 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
NEK6-210ENST00000447379 NACADO15069 1562 aa33.65■■■□□ 2.98
NEK6-210ENST00000447379 DCAF8L2P0C7V8 631 aa33.58■■■□□ 2.97
NEK6-210ENST00000447379 ZCCHC6Q5VYS8 1495 aaKnown RBP33.49■■■□□ 2.95
NEK6-210ENST00000447379 MYO15BQ96JP2 1530 aa33.47■■■□□ 2.95
NEK6-210ENST00000447379 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
NEK6-210ENST00000447379 UNC13AQ9UPW8 1703 aa32.93■■■□□ 2.86
NEK6-210ENST00000447379 PABPN1Q86U42 306 aaKnown RBP eCLIP32.74■■■□□ 2.83
NEK6-210ENST00000447379 BICRAQ9NZM4 1560 aa32.7■■■□□ 2.82
NEK6-210ENST00000447379 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
NEK6-210ENST00000447379 SHROOM4Q9ULL8 1493 aa32.34■■■□□ 2.77
NEK6-210ENST00000447379 DNAJC5BQ9UF47 199 aa32.26■■■□□ 2.75
NEK6-210ENST00000447379 EIF4G1Q04637 1599 aaKnown RBP31.81■■■□□ 2.68
NEK6-210ENST00000447379 CC2D2AQ9P2K1 1620 aa31.69■■■□□ 2.66
NEK6-210ENST00000447379 CECR2Q9BXF3 1484 aa31.48■■■□□ 2.63
NEK6-210ENST00000447379 SMARCA4P51532 1647 aa31.2■■■□□ 2.59
NEK6-210ENST00000447379 BAZ1AQ9NRL2 1556 aaPredicted RBP31.16■■■□□ 2.58
NEK6-210ENST00000447379 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
NEK6-210ENST00000447379 ATAD2BQ9ULI0 1458 aa31.07■■■□□ 2.56
NEK6-210ENST00000447379 SMARCA2P51531 1590 aa31.01■■■□□ 2.56
NEK6-210ENST00000447379 MROH2BQ7Z745 1585 aa31■■■□□ 2.55
NEK6-210ENST00000447379 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
NEK6-210ENST00000447379 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
NEK6-210ENST00000447379 BAZ1BQ9UIG0 1483 aaKnown RBP30.77■■■□□ 2.52
NEK6-210ENST00000447379 WIZO95785 1651 aa30.65■■■□□ 2.5
NEK6-210ENST00000447379 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
NEK6-210ENST00000447379 TOP2AP11388 1531 aaKnown RBP30.32■■■□□ 2.44
NEK6-210ENST00000447379 NESP48681 1621 aa30.31■■■□□ 2.44
NEK6-210ENST00000447379 LAMC3Q9Y6N6 1575 aa30.23■■■□□ 2.43
NEK6-210ENST00000447379 CADPSQ9ULU8 1353 aa30.16■■■□□ 2.42
NEK6-210ENST00000447379 ERCC6Q03468 1493 aa30.16■■■□□ 2.42
NEK6-210ENST00000447379 PDS5BQ9NTI5 1447 aa30.04■■■□□ 2.4
NEK6-210ENST00000447379 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
NEK6-210ENST00000447379 CFTRP13569 1480 aa29.97■■■□□ 2.39
NEK6-210ENST00000447379 KIF21AQ7Z4S6 1674 aa29.93■■■□□ 2.38
NEK6-210ENST00000447379 CUX2O14529 1486 aa29.9■■■□□ 2.38
NEK6-210ENST00000447379 THOC2Q8NI27 1593 aaKnown RBP29.85■■■□□ 2.37
NEK6-210ENST00000447379 SUPT5HO00267 1087 aaKnown RBP29.79■■■□□ 2.36
NEK6-210ENST00000447379 FANCD2Q9BXW9 1451 aa29.78■■■□□ 2.36
NEK6-210ENST00000447379 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
NEK6-210ENST00000447379 MRC2Q9UBG0 1479 aa29.72■■■□□ 2.35
NEK6-210ENST00000447379 PRDM2Q13029 1718 aa29.71■■■□□ 2.35
NEK6-210ENST00000447379 WDR62O43379 1518 aa29.62■■■□□ 2.33
NEK6-210ENST00000447379 URB2Q14146 1524 aaKnown RBP29.5■■■□□ 2.31
NEK6-210ENST00000447379 ABCC8Q09428 1581 aa29.32■■■□□ 2.28
NEK6-210ENST00000447379 TOPBP1Q92547 1522 aa29.31■■■□□ 2.28
NEK6-210ENST00000447379 DNMBPQ6XZF7 1577 aa29.26■■■□□ 2.28
NEK6-210ENST00000447379 IFT140Q96RY7 1462 aa29.14■■■□□ 2.26
NEK6-210ENST00000447379 CUX1P39880 1505 aa29.09■■■□□ 2.25
NEK6-210ENST00000447379 DNAJC5Q9H3Z4 198 aa29.08■■■□□ 2.25
NEK6-210ENST00000447379 POLA1P09884 1462 aaPredicted RBP29.05■■■□□ 2.24
NEK6-210ENST00000447379 ZNF608Q9ULD9 1512 aaPredicted RBP29.01■■■□□ 2.23
NEK6-210ENST00000447379 TARBP1Q13395 1621 aaKnown RBP29.01■■■□□ 2.23
NEK6-210ENST00000447379 FGD5Q6ZNL6 1462 aa28.97■■■□□ 2.23
NEK6-210ENST00000447379 SOGA1O94964 1423 aa28.95■■■□□ 2.23
NEK6-210ENST00000447379 RAD54L2Q9Y4B4 1467 aa28.93■■■□□ 2.22
NEK6-210ENST00000447379 WRNQ14191 1432 aaPredicted RBP eCLIP28.86■■■□□ 2.21
NEK6-210ENST00000447379 EIF4G3O43432 1585 aaKnown RBP28.86■■■□□ 2.21
NEK6-210ENST00000447379 AQRO60306 1485 aaKnown RBP eCLIP28.85■■■□□ 2.212e-7■□□□□ 10.1
NEK6-210ENST00000447379 TOP2BQ02880 1626 aa28.81■■■□□ 2.2
NEK6-210ENST00000447379 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
NEK6-210ENST00000447379 SYNJ1O43426 1573 aa28.79■■■□□ 2.2
NEK6-210ENST00000447379 TDRD9Q8NDG6 1382 aaKnown RBP28.78■■■□□ 2.2
NEK6-210ENST00000447379 WDR97A6NE52 1622 aa28.76■■■□□ 2.2
NEK6-210ENST00000447379 ABCA10Q8WWZ4 1543 aa28.71■■■□□ 2.19
NEK6-210ENST00000447379 OSCARQ8IYS5 282 aa28.68■■■□□ 2.18
NEK6-210ENST00000447379 GRIN2BQ13224 1484 aa28.6■■■□□ 2.17
NEK6-210ENST00000447379 GAPVD1Q14C86 1478 aa28.6■■■□□ 2.17
NEK6-210ENST00000447379 ABCA5Q8WWZ7 1642 aa28.58■■■□□ 2.17
NEK6-210ENST00000447379 SNAPC4Q5SXM2 1469 aa28.56■■■□□ 2.16
NEK6-210ENST00000447379 MAGI1Q96QZ7 1491 aaPredicted RBP28.53■■■□□ 2.16
NEK6-210ENST00000447379 CHD1O14646 1710 aa28.52■■■□□ 2.16
NEK6-210ENST00000447379 PBRM1Q86U86 1689 aa28.51■■■□□ 2.16
NEK6-210ENST00000447379 FBLN2P98095 1184 aa28.47■■■□□ 2.15
NEK6-210ENST00000447379 SYNJ2O15056 1496 aa28.42■■■□□ 2.14
NEK6-210ENST00000447379 CHMP7Q8WUX9 453 aaPredicted RBP28.42■■■□□ 2.14
NEK6-210ENST00000447379 ERICH3Q5RHP9 1530 aa28.36■■■□□ 2.13
NEK6-210ENST00000447379 ADAMTS12P58397 1594 aa28.31■■■□□ 2.12
NEK6-210ENST00000447379 FHAD1B1AJZ9 1412 aa28.28■■■□□ 2.12
NEK6-210ENST00000447379 KIF27Q86VH2 1401 aa28.26■■■□□ 2.12
NEK6-210ENST00000447379 CLASP1Q7Z460 1538 aa28.23■■■□□ 2.11
NEK6-210ENST00000447379 GRIN2AQ12879 1464 aa28.23■■■□□ 2.11
NEK6-210ENST00000447379 IGF1RP08069 1367 aa28.21■■■□□ 2.11
NEK6-210ENST00000447379 RIMBP3CA6NJZ7 1639 aa28.19■■■□□ 2.1
NEK6-210ENST00000447379 RIMBP3BA6NNM3 1639 aa28.19■■■□□ 2.1
NEK6-210ENST00000447379 RIMBP3Q9UFD9 1639 aa28.19■■■□□ 2.1
NEK6-210ENST00000447379 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
NEK6-210ENST00000447379 TRIM41Q8WV44 630 aa28.16■■■□□ 2.1
NEK6-210ENST00000447379 NUP160Q12769 1436 aa28.13■■■□□ 2.09
NEK6-210ENST00000447379 CEP170Q5SW79 1584 aa28.09■■■□□ 2.09
NEK6-210ENST00000447379 CUL7Q14999 1698 aa28.07■■■□□ 2.08
NEK6-210ENST00000447379 RUSC2Q8N2Y8 1516 aa28.02■■■□□ 2.08
NEK6-210ENST00000447379 CARMIL1Q5VZK9 1371 aa28.01■■■□□ 2.07
NEK6-210ENST00000447379 ARAP1Q96P48 1450 aa27.96■■■□□ 2.07
NEK6-210ENST00000447379 CYB5RLQ6IPT4 315 aa27.94■■■□□ 2.06
NEK6-210ENST00000447379 SHROOM2Q13796 1616 aa27.92■■■□□ 2.06
NEK6-210ENST00000447379 JPH4Q96JJ6 628 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms