RNA–Protein interactions for RNA: ENST00000447351.5

GRAMD4-205, Transcript of GRAM domain containing 4, humanhuman

TSL 3

Gene GRAMD4, Length 375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-205ENST00000447351 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
GRAMD4-205ENST00000447351 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
GRAMD4-205ENST00000447351 ABCC9O60706 1549 aa29.38■■■□□ 2.29
GRAMD4-205ENST00000447351 RB1CC1Q8TDY2 1594 aa28.23■■■□□ 2.11
GRAMD4-205ENST00000447351 NACADO15069 1562 aa28.15■■■□□ 2.1
GRAMD4-205ENST00000447351 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
GRAMD4-205ENST00000447351 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
GRAMD4-205ENST00000447351 ZCCHC6Q5VYS8 1495 aaKnown RBP27.92■■■□□ 2.06
GRAMD4-205ENST00000447351 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
GRAMD4-205ENST00000447351 UNC13AQ9UPW8 1703 aa27.59■■■□□ 2.01
GRAMD4-205ENST00000447351 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
GRAMD4-205ENST00000447351 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
GRAMD4-205ENST00000447351 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
GRAMD4-205ENST00000447351 SHROOM4Q9ULL8 1493 aa27.11■■□□□ 1.93
GRAMD4-205ENST00000447351 DNAJC5BQ9UF47 199 aa27.01■■□□□ 1.91
GRAMD4-205ENST00000447351 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
GRAMD4-205ENST00000447351 CC2D2AQ9P2K1 1620 aa26.59■■□□□ 1.85
GRAMD4-205ENST00000447351 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
GRAMD4-205ENST00000447351 SMARCA4P51532 1647 aa26.07■■□□□ 1.76
GRAMD4-205ENST00000447351 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
GRAMD4-205ENST00000447351 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
GRAMD4-205ENST00000447351 NCAPD3P42695 1498 aa25.93■■□□□ 1.74
GRAMD4-205ENST00000447351 ATAD2BQ9ULI0 1458 aa25.93■■□□□ 1.74
GRAMD4-205ENST00000447351 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
GRAMD4-205ENST00000447351 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
GRAMD4-205ENST00000447351 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
GRAMD4-205ENST00000447351 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
GRAMD4-205ENST00000447351 WIZO95785 1651 aa25.55■■□□□ 1.68
GRAMD4-205ENST00000447351 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
GRAMD4-205ENST00000447351 ERCC6Q03468 1493 aa25.37■■□□□ 1.65
GRAMD4-205ENST00000447351 NESP48681 1621 aa25.37■■□□□ 1.65
GRAMD4-205ENST00000447351 LAMC3Q9Y6N6 1575 aa25.33■■□□□ 1.65
GRAMD4-205ENST00000447351 TOP2AP11388 1531 aaKnown RBP25.3■■□□□ 1.64
GRAMD4-205ENST00000447351 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
GRAMD4-205ENST00000447351 CUX2O14529 1486 aa25.15■■□□□ 1.62
GRAMD4-205ENST00000447351 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
GRAMD4-205ENST00000447351 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
GRAMD4-205ENST00000447351 THOC2Q8NI27 1593 aaKnown RBP25.08■■□□□ 1.61
GRAMD4-205ENST00000447351 CFTRP13569 1480 aa25■■□□□ 1.59
GRAMD4-205ENST00000447351 CCDC88BA6NC98 1476 aa24.95■■□□□ 1.58
GRAMD4-205ENST00000447351 CEP164Q9UPV0 1460 aa24.92■■□□□ 1.58
GRAMD4-205ENST00000447351 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
GRAMD4-205ENST00000447351 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
GRAMD4-205ENST00000447351 PRDM2Q13029 1718 aa24.89■■□□□ 1.57
GRAMD4-205ENST00000447351 WDR62O43379 1518 aa24.84■■□□□ 1.57
GRAMD4-205ENST00000447351 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
GRAMD4-205ENST00000447351 SUPT5HO00267 1087 aaKnown RBP24.66■■□□□ 1.54
GRAMD4-205ENST00000447351 TOPBP1Q92547 1522 aa24.5■■□□□ 1.51
GRAMD4-205ENST00000447351 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
GRAMD4-205ENST00000447351 DNMBPQ6XZF7 1577 aa24.48■■□□□ 1.51
GRAMD4-205ENST00000447351 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
GRAMD4-205ENST00000447351 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
GRAMD4-205ENST00000447351 POLA1P09884 1462 aaPredicted RBP24.27■■□□□ 1.48
GRAMD4-205ENST00000447351 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
GRAMD4-205ENST00000447351 CUX1P39880 1505 aa24.25■■□□□ 1.47
GRAMD4-205ENST00000447351 TARBP1Q13395 1621 aaKnown RBP24.24■■□□□ 1.47
GRAMD4-205ENST00000447351 EIF4G3O43432 1585 aaKnown RBP24.22■■□□□ 1.47
GRAMD4-205ENST00000447351 FGD5Q6ZNL6 1462 aa24.19■■□□□ 1.46
GRAMD4-205ENST00000447351 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.46
GRAMD4-205ENST00000447351 SOGA1O94964 1423 aa24.14■■□□□ 1.45
GRAMD4-205ENST00000447351 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
GRAMD4-205ENST00000447351 AQRO60306 1485 aaKnown RBP eCLIP24.08■■□□□ 1.45
GRAMD4-205ENST00000447351 BIVM-ERCC5R4GMW8 1640 aa24.04■■□□□ 1.44
GRAMD4-205ENST00000447351 WRNQ14191 1432 aaPredicted RBP eCLIP24.03■■□□□ 1.44
GRAMD4-205ENST00000447351 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
GRAMD4-205ENST00000447351 TDRD9Q8NDG6 1382 aaKnown RBP24.02■■□□□ 1.44
GRAMD4-205ENST00000447351 SYNJ1O43426 1573 aa24■■□□□ 1.43
GRAMD4-205ENST00000447351 OSCARQ8IYS5 282 aa24■■□□□ 1.43
GRAMD4-205ENST00000447351 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.43
GRAMD4-205ENST00000447351 CHD1O14646 1710 aa23.95■■□□□ 1.42
GRAMD4-205ENST00000447351 GRIN2BQ13224 1484 aa23.92■■□□□ 1.42
GRAMD4-205ENST00000447351 SNAPC4Q5SXM2 1469 aa23.91■■□□□ 1.42
GRAMD4-205ENST00000447351 PBRM1Q86U86 1689 aa23.91■■□□□ 1.42
GRAMD4-205ENST00000447351 ABCA5Q8WWZ7 1642 aa23.91■■□□□ 1.42
GRAMD4-205ENST00000447351 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
GRAMD4-205ENST00000447351 MAGI1Q96QZ7 1491 aaPredicted RBP23.88■■□□□ 1.41
GRAMD4-205ENST00000447351 FBLN2P98095 1184 aa23.82■■□□□ 1.4
GRAMD4-205ENST00000447351 SYNJ2O15056 1496 aa23.78■■□□□ 1.4
GRAMD4-205ENST00000447351 CHMP7Q8WUX9 453 aaPredicted RBP23.73■■□□□ 1.39
GRAMD4-205ENST00000447351 RIMBP3CA6NJZ7 1639 aa23.72■■□□□ 1.39
GRAMD4-205ENST00000447351 RIMBP3BA6NNM3 1639 aa23.72■■□□□ 1.39
GRAMD4-205ENST00000447351 RIMBP3Q9UFD9 1639 aa23.72■■□□□ 1.39
GRAMD4-205ENST00000447351 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
GRAMD4-205ENST00000447351 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
GRAMD4-205ENST00000447351 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
GRAMD4-205ENST00000447351 CLASP1Q7Z460 1538 aa23.67■■□□□ 1.38
GRAMD4-205ENST00000447351 TRIM41Q8WV44 630 aa23.63■■□□□ 1.37
GRAMD4-205ENST00000447351 FHAD1B1AJZ9 1412 aa23.61■■□□□ 1.37
GRAMD4-205ENST00000447351 GRIN2AQ12879 1464 aa23.61■■□□□ 1.37
GRAMD4-205ENST00000447351 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
GRAMD4-205ENST00000447351 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
GRAMD4-205ENST00000447351 NUP160Q12769 1436 aa23.5■■□□□ 1.35
GRAMD4-205ENST00000447351 ARAP1Q96P48 1450 aa23.48■■□□□ 1.35
GRAMD4-205ENST00000447351 CUL7Q14999 1698 aa23.47■■□□□ 1.35
GRAMD4-205ENST00000447351 IGF1RP08069 1367 aa23.41■■□□□ 1.34
GRAMD4-205ENST00000447351 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
GRAMD4-205ENST00000447351 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
GRAMD4-205ENST00000447351 RUSC2Q8N2Y8 1516 aa23.36■■□□□ 1.33
GRAMD4-205ENST00000447351 ERCC6L2Q5T890 1561 aa23.3■■□□□ 1.32
GRAMD4-205ENST00000447351 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms