RNA–Protein interactions for RNA: ENST00000447299.1

MRPS25-204, Transcript of mitochondrial ribosomal protein S25, humanhuman

TSL 3

Gene MRPS25, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS25-204ENST00000447299 NISCHQ9Y2I1 1504 aa40.77■■■■■ 4.12
MRPS25-204ENST00000447299 ABCC9O60706 1549 aa36.85■■■■□ 3.49
MRPS25-204ENST00000447299 CCDC180Q9P1Z9 1646 aa36.52■■■■□ 3.44
MRPS25-204ENST00000447299 RB1CC1Q8TDY2 1594 aa34.91■■■■□ 3.18
MRPS25-204ENST00000447299 DNAJC5BQ9UF47 199 aa34.79■■■■□ 3.16
MRPS25-204ENST00000447299 NACADO15069 1562 aa34.63■■■■□ 3.13
MRPS25-204ENST00000447299 DCAF8L2P0C7V8 631 aa34.63■■■■□ 3.13
MRPS25-204ENST00000447299 PABPN1Q86U42 306 aaKnown RBP eCLIP34.36■■■■□ 3.09
MRPS25-204ENST00000447299 MYO15BQ96JP2 1530 aa34.08■■■■□ 3.05
MRPS25-204ENST00000447299 UNC13AQ9UPW8 1703 aa34.06■■■■□ 3.04
MRPS25-204ENST00000447299 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
MRPS25-204ENST00000447299 ZCCHC6Q5VYS8 1495 aaKnown RBP33.73■■■□□ 2.99
MRPS25-204ENST00000447299 DCAF1Q9Y4B6 1507 aa33.6■■■□□ 2.97
MRPS25-204ENST00000447299 SCRIBQ14160 1630 aa33.39■■■□□ 2.93
MRPS25-204ENST00000447299 SHROOM4Q9ULL8 1493 aa33.37■■■□□ 2.93
MRPS25-204ENST00000447299 CC2D2AQ9P2K1 1620 aa33.21■■■□□ 2.91
MRPS25-204ENST00000447299 CECR2Q9BXF3 1484 aa33.19■■■□□ 2.9
MRPS25-204ENST00000447299 EIF4G1Q04637 1599 aaKnown RBP33.1■■■□□ 2.89
MRPS25-204ENST00000447299 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
MRPS25-204ENST00000447299 DNAJC5Q9H3Z4 198 aa32■■■□□ 2.71
MRPS25-204ENST00000447299 ATAD2BQ9ULI0 1458 aa31.92■■■□□ 2.7
MRPS25-204ENST00000447299 ERCC6Q03468 1493 aa31.8■■■□□ 2.68
MRPS25-204ENST00000447299 SMARCA4P51532 1647 aa31.79■■■□□ 2.68
MRPS25-204ENST00000447299 SMARCA2P51531 1590 aa31.77■■■□□ 2.68
MRPS25-204ENST00000447299 CUX2O14529 1486 aa31.74■■■□□ 2.67
MRPS25-204ENST00000447299 HMGXB3Q12766 1538 aa31.71■■■□□ 2.67
MRPS25-204ENST00000447299 BAZ1AQ9NRL2 1556 aaPredicted RBP31.62■■■□□ 2.65
MRPS25-204ENST00000447299 NESP48681 1621 aa31.61■■■□□ 2.65
MRPS25-204ENST00000447299 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
MRPS25-204ENST00000447299 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
MRPS25-204ENST00000447299 MROH2BQ7Z745 1585 aa31.43■■■□□ 2.62
MRPS25-204ENST00000447299 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.6
MRPS25-204ENST00000447299 THOC2Q8NI27 1593 aaKnown RBP31.22■■■□□ 2.59
MRPS25-204ENST00000447299 PDS5BQ9NTI5 1447 aa31.15■■■□□ 2.58
MRPS25-204ENST00000447299 KIF21AQ7Z4S6 1674 aa31.09■■■□□ 2.57
MRPS25-204ENST00000447299 CADPSQ9ULU8 1353 aa31.07■■■□□ 2.56
MRPS25-204ENST00000447299 WIZO95785 1651 aa31.02■■■□□ 2.56
MRPS25-204ENST00000447299 MRC2Q9UBG0 1479 aa30.88■■■□□ 2.53
MRPS25-204ENST00000447299 WDR62O43379 1518 aa30.78■■■□□ 2.52
MRPS25-204ENST00000447299 RSF1Q96T23 1441 aaPredicted RBP30.75■■■□□ 2.51
MRPS25-204ENST00000447299 CEP164Q9UPV0 1460 aa30.73■■■□□ 2.51
MRPS25-204ENST00000447299 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.51
MRPS25-204ENST00000447299 CFTRP13569 1480 aa30.66■■■□□ 2.5
MRPS25-204ENST00000447299 TOP2AP11388 1531 aaKnown RBP30.6■■■□□ 2.49
MRPS25-204ENST00000447299 TRIM41Q8WV44 630 aa30.57■■■□□ 2.48
MRPS25-204ENST00000447299 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
MRPS25-204ENST00000447299 OSCARQ8IYS5 282 aa30.36■■■□□ 2.45
MRPS25-204ENST00000447299 CCDC88BA6NC98 1476 aa30.32■■■□□ 2.44
MRPS25-204ENST00000447299 PRDM2Q13029 1718 aa30.18■■■□□ 2.42
MRPS25-204ENST00000447299 ZNF608Q9ULD9 1512 aaPredicted RBP30.15■■■□□ 2.42
MRPS25-204ENST00000447299 IFT140Q96RY7 1462 aa30.12■■■□□ 2.41
MRPS25-204ENST00000447299 TOPBP1Q92547 1522 aa30.1■■■□□ 2.41
MRPS25-204ENST00000447299 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
MRPS25-204ENST00000447299 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
MRPS25-204ENST00000447299 RIMBP3CA6NJZ7 1639 aa29.9■■■□□ 2.38
MRPS25-204ENST00000447299 RIMBP3BA6NNM3 1639 aa29.9■■■□□ 2.38
MRPS25-204ENST00000447299 RIMBP3Q9UFD9 1639 aa29.9■■■□□ 2.38
MRPS25-204ENST00000447299 EIF4G3O43432 1585 aaKnown RBP29.88■■■□□ 2.37
MRPS25-204ENST00000447299 AQRO60306 1485 aaKnown RBP eCLIP29.87■■■□□ 2.375e-14■■■■■ 64.7
MRPS25-204ENST00000447299 ARHGEF11O15085 1522 aa29.81■■■□□ 2.36
MRPS25-204ENST00000447299 TARBP1Q13395 1621 aaKnown RBP29.81■■■□□ 2.36
MRPS25-204ENST00000447299 POLA1P09884 1462 aaPredicted RBP29.79■■■□□ 2.36
MRPS25-204ENST00000447299 FBLN2P98095 1184 aa29.75■■■□□ 2.35
MRPS25-204ENST00000447299 RAD54L2Q9Y4B4 1467 aa29.73■■■□□ 2.35
MRPS25-204ENST00000447299 CYB5RLQ6IPT4 315 aa29.71■■■□□ 2.35
MRPS25-204ENST00000447299 TDRD9Q8NDG6 1382 aaKnown RBP29.68■■■□□ 2.34
MRPS25-204ENST00000447299 SOGA1O94964 1423 aa29.68■■■□□ 2.34
MRPS25-204ENST00000447299 CHD1O14646 1710 aa29.66■■■□□ 2.34
MRPS25-204ENST00000447299 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
MRPS25-204ENST00000447299 CUX1P39880 1505 aa29.54■■■□□ 2.32
MRPS25-204ENST00000447299 ARAP1Q96P48 1450 aa29.53■■■□□ 2.32
MRPS25-204ENST00000447299 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.31
MRPS25-204ENST00000447299 CHMP7Q8WUX9 453 aaPredicted RBP29.47■■■□□ 2.31
MRPS25-204ENST00000447299 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
MRPS25-204ENST00000447299 TRHP20396 242 aaPredicted RBP29.41■■■□□ 2.3
MRPS25-204ENST00000447299 GRIN2BQ13224 1484 aa29.4■■■□□ 2.3
MRPS25-204ENST00000447299 MAGI1Q96QZ7 1491 aaPredicted RBP29.39■■■□□ 2.3
MRPS25-204ENST00000447299 SUPT5HO00267 1087 aaKnown RBP29.37■■■□□ 2.29
MRPS25-204ENST00000447299 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
MRPS25-204ENST00000447299 SYNJ2O15056 1496 aa29.32■■■□□ 2.28
MRPS25-204ENST00000447299 SYNJ1O43426 1573 aa29.31■■■□□ 2.28
MRPS25-204ENST00000447299 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
MRPS25-204ENST00000447299 ABCA10Q8WWZ4 1543 aa29.22■■■□□ 2.27
MRPS25-204ENST00000447299 PBRM1Q86U86 1689 aa29.19■■■□□ 2.26
MRPS25-204ENST00000447299 ABCA5Q8WWZ7 1642 aa29.15■■■□□ 2.26
MRPS25-204ENST00000447299 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
MRPS25-204ENST00000447299 GRIN2AQ12879 1464 aa29.02■■■□□ 2.24
MRPS25-204ENST00000447299 TOP2BQ02880 1626 aa28.98■■■□□ 2.23
MRPS25-204ENST00000447299 ADAMTS12P58397 1594 aa28.95■■■□□ 2.22
MRPS25-204ENST00000447299 ERCC6L2Q5T890 1561 aa28.95■■■□□ 2.22
MRPS25-204ENST00000447299 BIVM-ERCC5R4GMW8 1640 aa28.94■■■□□ 2.22
MRPS25-204ENST00000447299 NUP160Q12769 1436 aa28.94■■■□□ 2.22
MRPS25-204ENST00000447299 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
MRPS25-204ENST00000447299 FHAD1B1AJZ9 1412 aa28.91■■■□□ 2.22
MRPS25-204ENST00000447299 ERICH3Q5RHP9 1530 aa28.83■■■□□ 2.21
MRPS25-204ENST00000447299 SHROOM2Q13796 1616 aa28.76■■■□□ 2.2
MRPS25-204ENST00000447299 PRG4Q92954 1404 aaPredicted RBP28.7■■■□□ 2.19
MRPS25-204ENST00000447299 JPH4Q96JJ6 628 aa28.7■■■□□ 2.18
MRPS25-204ENST00000447299 AEBP2Q6ZN18 517 aaPredicted RBP28.64■■■□□ 2.18
MRPS25-204ENST00000447299 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms