RNA–Protein interactions for RNA: ENST00000447136.1

SNX8-205, Transcript of sorting nexin 8, humanhuman

TSL 3

Gene SNX8, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-205ENST00000447136 NISCHQ9Y2I1 1504 aa27.27■■□□□ 1.96
SNX8-205ENST00000447136 CCDC180Q9P1Z9 1646 aa24.12■■□□□ 1.45
SNX8-205ENST00000447136 ABCC9O60706 1549 aa24.02■■□□□ 1.44
SNX8-205ENST00000447136 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
SNX8-205ENST00000447136 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
SNX8-205ENST00000447136 NACADO15069 1562 aa22.76■■□□□ 1.23
SNX8-205ENST00000447136 ZCCHC6Q5VYS8 1495 aaKnown RBP22.69■■□□□ 1.22
SNX8-205ENST00000447136 DNAJC5BQ9UF47 199 aa22.68■■□□□ 1.22
SNX8-205ENST00000447136 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
SNX8-205ENST00000447136 DCAF1Q9Y4B6 1507 aa22.49■■□□□ 1.19
SNX8-205ENST00000447136 PABPN1Q86U42 306 aaKnown RBP eCLIP22.34■■□□□ 1.17
SNX8-205ENST00000447136 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
SNX8-205ENST00000447136 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
SNX8-205ENST00000447136 BICRAQ9NZM4 1560 aa22.11■■□□□ 1.13
SNX8-205ENST00000447136 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
SNX8-205ENST00000447136 CC2D2AQ9P2K1 1620 aa21.67■■□□□ 1.06
SNX8-205ENST00000447136 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
SNX8-205ENST00000447136 EIF4G1Q04637 1599 aaKnown RBP21.58■■□□□ 1.05
SNX8-205ENST00000447136 BAZ1AQ9NRL2 1556 aaPredicted RBP21.13■□□□□ 0.97
SNX8-205ENST00000447136 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
SNX8-205ENST00000447136 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
SNX8-205ENST00000447136 NCAPD3P42695 1498 aa21.04■□□□□ 0.96
SNX8-205ENST00000447136 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
SNX8-205ENST00000447136 SMARCA2P51531 1590 aa21.02■□□□□ 0.95
SNX8-205ENST00000447136 DNAJC5Q9H3Z4 198 aa20.96■□□□□ 0.95
SNX8-205ENST00000447136 BAZ1BQ9UIG0 1483 aaKnown RBP20.93■□□□□ 0.94
SNX8-205ENST00000447136 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
SNX8-205ENST00000447136 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
SNX8-205ENST00000447136 RSF1Q96T23 1441 aaPredicted RBP20.83■□□□□ 0.93
SNX8-205ENST00000447136 WIZO95785 1651 aa20.78■□□□□ 0.92
SNX8-205ENST00000447136 CUX2O14529 1486 aa20.76■□□□□ 0.91
SNX8-205ENST00000447136 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
SNX8-205ENST00000447136 NESP48681 1621 aa20.58■□□□□ 0.89
SNX8-205ENST00000447136 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
SNX8-205ENST00000447136 SUPT5HO00267 1087 aaKnown RBP20.49■□□□□ 0.87
SNX8-205ENST00000447136 CADPSQ9ULU8 1353 aa20.48■□□□□ 0.87
SNX8-205ENST00000447136 LAMC3Q9Y6N6 1575 aa20.44■□□□□ 0.86
SNX8-205ENST00000447136 PDS5BQ9NTI5 1447 aa20.41■□□□□ 0.86
SNX8-205ENST00000447136 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
SNX8-205ENST00000447136 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
SNX8-205ENST00000447136 CFTRP13569 1480 aa20.31■□□□□ 0.84
SNX8-205ENST00000447136 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
SNX8-205ENST00000447136 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
SNX8-205ENST00000447136 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
SNX8-205ENST00000447136 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
SNX8-205ENST00000447136 WDR62O43379 1518 aa20.08■□□□□ 0.81
SNX8-205ENST00000447136 URB2Q14146 1524 aaKnown RBP20■□□□□ 0.79
SNX8-205ENST00000447136 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
SNX8-205ENST00000447136 PRDM2Q13029 1718 aa19.97■□□□□ 0.79
SNX8-205ENST00000447136 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
SNX8-205ENST00000447136 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
SNX8-205ENST00000447136 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.77
SNX8-205ENST00000447136 OSCARQ8IYS5 282 aa19.78■□□□□ 0.76
SNX8-205ENST00000447136 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
SNX8-205ENST00000447136 CUX1P39880 1505 aa19.73■□□□□ 0.75
SNX8-205ENST00000447136 POLA1P09884 1462 aaPredicted RBP19.72■□□□□ 0.75
SNX8-205ENST00000447136 SOGA1O94964 1423 aa19.7■□□□□ 0.74
SNX8-205ENST00000447136 FGD5Q6ZNL6 1462 aa19.69■□□□□ 0.74
SNX8-205ENST00000447136 RAD54L2Q9Y4B4 1467 aa19.69■□□□□ 0.74
SNX8-205ENST00000447136 ZNF608Q9ULD9 1512 aaPredicted RBP19.69■□□□□ 0.74
SNX8-205ENST00000447136 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
SNX8-205ENST00000447136 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
SNX8-205ENST00000447136 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
SNX8-205ENST00000447136 TARBP1Q13395 1621 aaKnown RBP19.6■□□□□ 0.73
SNX8-205ENST00000447136 EIF4G3O43432 1585 aaKnown RBP19.55■□□□□ 0.72
SNX8-205ENST00000447136 RIMBP3CA6NJZ7 1639 aa19.54■□□□□ 0.72
SNX8-205ENST00000447136 RIMBP3BA6NNM3 1639 aa19.54■□□□□ 0.72
SNX8-205ENST00000447136 RIMBP3Q9UFD9 1639 aa19.54■□□□□ 0.72
SNX8-205ENST00000447136 SYNJ1O43426 1573 aa19.53■□□□□ 0.72
SNX8-205ENST00000447136 TOP2BQ02880 1626 aa19.52■□□□□ 0.72
SNX8-205ENST00000447136 FBLN2P98095 1184 aa19.52■□□□□ 0.72
SNX8-205ENST00000447136 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
SNX8-205ENST00000447136 ARHGEF11O15085 1522 aa19.47■□□□□ 0.71
SNX8-205ENST00000447136 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
SNX8-205ENST00000447136 GAPVD1Q14C86 1478 aa19.44■□□□□ 0.7
SNX8-205ENST00000447136 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
SNX8-205ENST00000447136 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
SNX8-205ENST00000447136 CHMP7Q8WUX9 453 aaPredicted RBP19.41■□□□□ 0.7
SNX8-205ENST00000447136 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
SNX8-205ENST00000447136 CHD1O14646 1710 aa19.37■□□□□ 0.69
SNX8-205ENST00000447136 CYB5RLQ6IPT4 315 aa19.35■□□□□ 0.69
SNX8-205ENST00000447136 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
SNX8-205ENST00000447136 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.68
SNX8-205ENST00000447136 SYNJ2O15056 1496 aa19.29■□□□□ 0.68
SNX8-205ENST00000447136 ARAP1Q96P48 1450 aa19.28■□□□□ 0.68
SNX8-205ENST00000447136 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
SNX8-205ENST00000447136 KIF27Q86VH2 1401 aa19.26■□□□□ 0.67
SNX8-205ENST00000447136 ERICH3Q5RHP9 1530 aa19.21■□□□□ 0.67
SNX8-205ENST00000447136 FHAD1B1AJZ9 1412 aa19.21■□□□□ 0.67
SNX8-205ENST00000447136 TRHP20396 242 aaPredicted RBP19.2■□□□□ 0.66
SNX8-205ENST00000447136 IGF1RP08069 1367 aa19.18■□□□□ 0.66
SNX8-205ENST00000447136 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
SNX8-205ENST00000447136 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
SNX8-205ENST00000447136 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
SNX8-205ENST00000447136 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
SNX8-205ENST00000447136 RUSC2Q8N2Y8 1516 aa19.08■□□□□ 0.64
SNX8-205ENST00000447136 NUP160Q12769 1436 aa19.06■□□□□ 0.64
SNX8-205ENST00000447136 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
SNX8-205ENST00000447136 CEP170Q5SW79 1584 aa19.03■□□□□ 0.64
SNX8-205ENST00000447136 CUL7Q14999 1698 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms