RNA–Protein interactions for RNA: ENST00000447048.1

RUBCN-205, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-205ENST00000447048 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
RUBCN-205ENST00000447048 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
RUBCN-205ENST00000447048 ABCC9O60706 1549 aa19.78■□□□□ 0.76
RUBCN-205ENST00000447048 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
RUBCN-205ENST00000447048 NACADO15069 1562 aa19.27■□□□□ 0.68
RUBCN-205ENST00000447048 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
RUBCN-205ENST00000447048 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
RUBCN-205ENST00000447048 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
RUBCN-205ENST00000447048 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
RUBCN-205ENST00000447048 UNC13AQ9UPW8 1703 aa18.97■□□□□ 0.63
RUBCN-205ENST00000447048 SCRIBQ14160 1630 aa18.8■□□□□ 0.6
RUBCN-205ENST00000447048 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
RUBCN-205ENST00000447048 SHROOM4Q9ULL8 1493 aa18.53■□□□□ 0.56
RUBCN-205ENST00000447048 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
RUBCN-205ENST00000447048 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
RUBCN-205ENST00000447048 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
RUBCN-205ENST00000447048 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
RUBCN-205ENST00000447048 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
RUBCN-205ENST00000447048 CC2D2AQ9P2K1 1620 aa17.99■□□□□ 0.47
RUBCN-205ENST00000447048 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
RUBCN-205ENST00000447048 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
RUBCN-205ENST00000447048 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
RUBCN-205ENST00000447048 SMARCA2P51531 1590 aa17.83■□□□□ 0.44
RUBCN-205ENST00000447048 HMGXB3Q12766 1538 aa17.76■□□□□ 0.43
RUBCN-205ENST00000447048 WIZO95785 1651 aa17.75■□□□□ 0.43
RUBCN-205ENST00000447048 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
RUBCN-205ENST00000447048 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
RUBCN-205ENST00000447048 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
RUBCN-205ENST00000447048 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
RUBCN-205ENST00000447048 TOP2AP11388 1531 aaKnown RBP17.58■□□□□ 0.41
RUBCN-205ENST00000447048 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
RUBCN-205ENST00000447048 LAMC3Q9Y6N6 1575 aa17.31■□□□□ 0.36
RUBCN-205ENST00000447048 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
RUBCN-205ENST00000447048 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
RUBCN-205ENST00000447048 NESP48681 1621 aa17.2■□□□□ 0.34
RUBCN-205ENST00000447048 KIF21AQ7Z4S6 1674 aa17.18■□□□□ 0.34
RUBCN-205ENST00000447048 CFTRP13569 1480 aa17.16■□□□□ 0.34
RUBCN-205ENST00000447048 CADPSQ9ULU8 1353 aa17.15■□□□□ 0.34
RUBCN-205ENST00000447048 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
RUBCN-205ENST00000447048 PDS5BQ9NTI5 1447 aa17.06■□□□□ 0.32
RUBCN-205ENST00000447048 THOC2Q8NI27 1593 aaKnown RBP17.03■□□□□ 0.32
RUBCN-205ENST00000447048 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
RUBCN-205ENST00000447048 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
RUBCN-205ENST00000447048 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
RUBCN-205ENST00000447048 WDR62O43379 1518 aa16.91■□□□□ 0.3
RUBCN-205ENST00000447048 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
RUBCN-205ENST00000447048 URB2Q14146 1524 aaKnown RBP16.85■□□□□ 0.29
RUBCN-205ENST00000447048 CUX2O14529 1486 aa16.83■□□□□ 0.28
RUBCN-205ENST00000447048 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
RUBCN-205ENST00000447048 BIVM-ERCC5R4GMW8 1640 aa16.8■□□□□ 0.28
RUBCN-205ENST00000447048 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
RUBCN-205ENST00000447048 DNAJC5Q9H3Z4 198 aa16.77■□□□□ 0.28
RUBCN-205ENST00000447048 CUX1P39880 1505 aa16.76■□□□□ 0.27
RUBCN-205ENST00000447048 TOP2BQ02880 1626 aa16.75■□□□□ 0.27
RUBCN-205ENST00000447048 SYNJ1O43426 1573 aa16.74■□□□□ 0.27
RUBCN-205ENST00000447048 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
RUBCN-205ENST00000447048 WDR97A6NE52 1622 aa16.69■□□□□ 0.26
RUBCN-205ENST00000447048 POLA1P09884 1462 aaPredicted RBP16.67■□□□□ 0.26
RUBCN-205ENST00000447048 TARBP1Q13395 1621 aaKnown RBP16.66■□□□□ 0.26
RUBCN-205ENST00000447048 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
RUBCN-205ENST00000447048 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
RUBCN-205ENST00000447048 EIF4G3O43432 1585 aaKnown RBP16.59■□□□□ 0.25
RUBCN-205ENST00000447048 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
RUBCN-205ENST00000447048 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
RUBCN-205ENST00000447048 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
RUBCN-205ENST00000447048 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
RUBCN-205ENST00000447048 SOGA1O94964 1423 aa16.52■□□□□ 0.23
RUBCN-205ENST00000447048 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
RUBCN-205ENST00000447048 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
RUBCN-205ENST00000447048 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.215e-6■■□□□ 11.5
RUBCN-205ENST00000447048 CHD1O14646 1710 aa16.37■□□□□ 0.21
RUBCN-205ENST00000447048 GRIN2BQ13224 1484 aa16.36■□□□□ 0.21
RUBCN-205ENST00000447048 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
RUBCN-205ENST00000447048 TDRD9Q8NDG6 1382 aaKnown RBP16.36■□□□□ 0.21
RUBCN-205ENST00000447048 CUL7Q14999 1698 aa16.35■□□□□ 0.21
RUBCN-205ENST00000447048 TRIM41Q8WV44 630 aa16.35■□□□□ 0.21
RUBCN-205ENST00000447048 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
RUBCN-205ENST00000447048 MAGI1Q96QZ7 1491 aaPredicted RBP16.34■□□□□ 0.21
RUBCN-205ENST00000447048 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
RUBCN-205ENST00000447048 SNAPC4Q5SXM2 1469 aa16.33■□□□□ 0.2
RUBCN-205ENST00000447048 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
RUBCN-205ENST00000447048 SYNJ2O15056 1496 aa16.24■□□□□ 0.19
RUBCN-205ENST00000447048 EEA1Q15075 1411 aa16.22■□□□□ 0.19
RUBCN-205ENST00000447048 RUSC2Q8N2Y8 1516 aa16.22■□□□□ 0.19
RUBCN-205ENST00000447048 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
RUBCN-205ENST00000447048 GRIN2AQ12879 1464 aa16.17■□□□□ 0.18
RUBCN-205ENST00000447048 CTTNBP2Q8WZ74 1663 aa16.14■□□□□ 0.18
RUBCN-205ENST00000447048 IGF1RP08069 1367 aa16.14■□□□□ 0.17
RUBCN-205ENST00000447048 CEP170Q5SW79 1584 aa16.13■□□□□ 0.17
RUBCN-205ENST00000447048 KIF21BO75037 1637 aa16.12■□□□□ 0.17
RUBCN-205ENST00000447048 CLASP1Q7Z460 1538 aa16.11■□□□□ 0.17
RUBCN-205ENST00000447048 PRXQ9BXM0 1461 aa16.09■□□□□ 0.17
RUBCN-205ENST00000447048 RAPGEF2Q9Y4G8 1499 aa16.09■□□□□ 0.17
RUBCN-205ENST00000447048 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
RUBCN-205ENST00000447048 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
RUBCN-205ENST00000447048 NUP160Q12769 1436 aa16.07■□□□□ 0.16
RUBCN-205ENST00000447048 FBLN2P98095 1184 aa16.06■□□□□ 0.16
RUBCN-205ENST00000447048 SHROOM2Q13796 1616 aa16.04■□□□□ 0.16
RUBCN-205ENST00000447048 IQGAP2Q13576 1575 aa16.01■□□□□ 0.15
RUBCN-205ENST00000447048 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms