RNA–Protein interactions for RNA: ENST00000446961.2

LRRC20-207, Transcript of leucine rich repeat containing 20, humanhuman

TSL 2

Gene LRRC20, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20-207ENST00000446961 NISCHQ9Y2I1 1504 aa38.41■■■■□ 3.74
LRRC20-207ENST00000446961 ABCC9O60706 1549 aa35■■■■□ 3.19
LRRC20-207ENST00000446961 CCDC180Q9P1Z9 1646 aa34.81■■■■□ 3.16
LRRC20-207ENST00000446961 RB1CC1Q8TDY2 1594 aa33.21■■■□□ 2.91
LRRC20-207ENST00000446961 DNAJC5BQ9UF47 199 aa33.2■■■□□ 2.91
LRRC20-207ENST00000446961 NACADO15069 1562 aa32.89■■■□□ 2.86
LRRC20-207ENST00000446961 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
LRRC20-207ENST00000446961 BICRAQ9NZM4 1560 aa32.38■■■□□ 2.77
LRRC20-207ENST00000446961 MYO15BQ96JP2 1530 aa32.38■■■□□ 2.77
LRRC20-207ENST00000446961 PABPN1Q86U42 306 aaKnown RBP eCLIP32.36■■■□□ 2.77
LRRC20-207ENST00000446961 DCAF8L2P0C7V8 631 aa32.13■■■□□ 2.73
LRRC20-207ENST00000446961 SHROOM4Q9ULL8 1493 aa31.89■■■□□ 2.7
LRRC20-207ENST00000446961 ZCCHC6Q5VYS8 1495 aaKnown RBP31.81■■■□□ 2.68
LRRC20-207ENST00000446961 DCAF1Q9Y4B6 1507 aa31.79■■■□□ 2.68
LRRC20-207ENST00000446961 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
LRRC20-207ENST00000446961 CECR2Q9BXF3 1484 aa31.59■■■□□ 2.65
LRRC20-207ENST00000446961 EIF4G1Q04637 1599 aaKnown RBP31.55■■■□□ 2.64
LRRC20-207ENST00000446961 SCRIBQ14160 1630 aa31.54■■■□□ 2.64
LRRC20-207ENST00000446961 DNAJC5Q9H3Z4 198 aa30.77■■■□□ 2.52
LRRC20-207ENST00000446961 CUX2O14529 1486 aa30.44■■■□□ 2.46
LRRC20-207ENST00000446961 NCAPD3P42695 1498 aa30.34■■■□□ 2.45
LRRC20-207ENST00000446961 ERCC6Q03468 1493 aa30.19■■■□□ 2.42
LRRC20-207ENST00000446961 ATAD2BQ9ULI0 1458 aa30.19■■■□□ 2.42
LRRC20-207ENST00000446961 HMGXB3Q12766 1538 aa30.17■■■□□ 2.42
LRRC20-207ENST00000446961 SMARCA4P51532 1647 aa30.12■■■□□ 2.41
LRRC20-207ENST00000446961 SMARCA2P51531 1590 aa30.08■■■□□ 2.41
LRRC20-207ENST00000446961 NESP48681 1621 aa29.99■■■□□ 2.39
LRRC20-207ENST00000446961 THOC2Q8NI27 1593 aaKnown RBP29.95■■■□□ 2.39
LRRC20-207ENST00000446961 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
LRRC20-207ENST00000446961 BAZ1AQ9NRL2 1556 aaPredicted RBP29.84■■■□□ 2.37
LRRC20-207ENST00000446961 BAZ1BQ9UIG0 1483 aaKnown RBP29.82■■■□□ 2.36
LRRC20-207ENST00000446961 LAMC3Q9Y6N6 1575 aa29.77■■■□□ 2.36
LRRC20-207ENST00000446961 KIF21AQ7Z4S6 1674 aa29.71■■■□□ 2.35
LRRC20-207ENST00000446961 MROH2BQ7Z745 1585 aa29.59■■■□□ 2.33
LRRC20-207ENST00000446961 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
LRRC20-207ENST00000446961 WDR62O43379 1518 aa29.37■■■□□ 2.29
LRRC20-207ENST00000446961 MRC2Q9UBG0 1479 aa29.34■■■□□ 2.29
LRRC20-207ENST00000446961 CADPSQ9ULU8 1353 aa29.31■■■□□ 2.28
LRRC20-207ENST00000446961 WIZO95785 1651 aa29.23■■■□□ 2.27
LRRC20-207ENST00000446961 CEP164Q9UPV0 1460 aa29.1■■■□□ 2.25
LRRC20-207ENST00000446961 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
LRRC20-207ENST00000446961 FANCD2Q9BXW9 1451 aa29.02■■■□□ 2.24
LRRC20-207ENST00000446961 CFTRP13569 1480 aa28.97■■■□□ 2.23
LRRC20-207ENST00000446961 URB2Q14146 1524 aaKnown RBP28.89■■■□□ 2.21
LRRC20-207ENST00000446961 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
LRRC20-207ENST00000446961 PRDM2Q13029 1718 aa28.84■■■□□ 2.21
LRRC20-207ENST00000446961 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
LRRC20-207ENST00000446961 OSCARQ8IYS5 282 aa28.71■■■□□ 2.19
LRRC20-207ENST00000446961 RIMBP3CA6NJZ7 1639 aa28.68■■■□□ 2.18
LRRC20-207ENST00000446961 RIMBP3BA6NNM3 1639 aa28.68■■■□□ 2.18
LRRC20-207ENST00000446961 RIMBP3Q9UFD9 1639 aa28.68■■■□□ 2.18
LRRC20-207ENST00000446961 ZNF608Q9ULD9 1512 aaPredicted RBP28.56■■■□□ 2.16
LRRC20-207ENST00000446961 IFT140Q96RY7 1462 aa28.53■■■□□ 2.16
LRRC20-207ENST00000446961 ARHGEF11O15085 1522 aa28.51■■■□□ 2.15
LRRC20-207ENST00000446961 EIF4G3O43432 1585 aaKnown RBP28.48■■■□□ 2.15
LRRC20-207ENST00000446961 TOPBP1Q92547 1522 aa28.47■■■□□ 2.15
LRRC20-207ENST00000446961 CCDC88BA6NC98 1476 aa28.43■■■□□ 2.14
LRRC20-207ENST00000446961 DNMBPQ6XZF7 1577 aa28.37■■■□□ 2.13
LRRC20-207ENST00000446961 CHD1O14646 1710 aa28.36■■■□□ 2.13
LRRC20-207ENST00000446961 TARBP1Q13395 1621 aaKnown RBP28.34■■■□□ 2.13
LRRC20-207ENST00000446961 ABCC8Q09428 1581 aa28.3■■■□□ 2.12
LRRC20-207ENST00000446961 ARAP1Q96P48 1450 aa28.21■■■□□ 2.11
LRRC20-207ENST00000446961 AQRO60306 1485 aaKnown RBP eCLIP28.15■■■□□ 2.1
LRRC20-207ENST00000446961 POLA1P09884 1462 aaPredicted RBP28.15■■■□□ 2.1
LRRC20-207ENST00000446961 CYB5RLQ6IPT4 315 aa28.05■■■□□ 2.08
LRRC20-207ENST00000446961 CLASP1Q7Z460 1538 aa28.04■■■□□ 2.08
LRRC20-207ENST00000446961 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
LRRC20-207ENST00000446961 RAD54L2Q9Y4B4 1467 aa27.99■■■□□ 2.07
LRRC20-207ENST00000446961 SNAPC4Q5SXM2 1469 aa27.93■■■□□ 2.06
LRRC20-207ENST00000446961 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.06
LRRC20-207ENST00000446961 SOGA1O94964 1423 aa27.87■■■□□ 2.05
LRRC20-207ENST00000446961 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
LRRC20-207ENST00000446961 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
LRRC20-207ENST00000446961 MAGI1Q96QZ7 1491 aaPredicted RBP27.86■■■□□ 2.05
LRRC20-207ENST00000446961 CUX1P39880 1505 aa27.84■■■□□ 2.05
LRRC20-207ENST00000446961 FBLN2P98095 1184 aa27.82■■■□□ 2.04
LRRC20-207ENST00000446961 TRHP20396 242 aaPredicted RBP27.8■■■□□ 2.04
LRRC20-207ENST00000446961 PBRM1Q86U86 1689 aa27.78■■■□□ 2.04
LRRC20-207ENST00000446961 GRIN2BQ13224 1484 aa27.76■■■□□ 2.04
LRRC20-207ENST00000446961 SYNJ2O15056 1496 aa27.76■■■□□ 2.03
LRRC20-207ENST00000446961 ABCA5Q8WWZ7 1642 aa27.68■■■□□ 2.02
LRRC20-207ENST00000446961 CHMP7Q8WUX9 453 aaPredicted RBP27.61■■■□□ 2.01
LRRC20-207ENST00000446961 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
LRRC20-207ENST00000446961 ABCA10Q8WWZ4 1543 aa27.58■■■□□ 2.01
LRRC20-207ENST00000446961 ERCC6L2Q5T890 1561 aa27.52■■■□□ 2
LRRC20-207ENST00000446961 ADAMTS12P58397 1594 aa27.48■■□□□ 1.99
LRRC20-207ENST00000446961 GRIN2AQ12879 1464 aa27.45■■□□□ 1.99
LRRC20-207ENST00000446961 SHROOM2Q13796 1616 aa27.45■■□□□ 1.98
LRRC20-207ENST00000446961 CEP170Q5SW79 1584 aa27.44■■□□□ 1.98
LRRC20-207ENST00000446961 NUP160Q12769 1436 aa27.41■■□□□ 1.98
LRRC20-207ENST00000446961 BIVM-ERCC5R4GMW8 1640 aa27.36■■□□□ 1.97
LRRC20-207ENST00000446961 KIF13AQ9H1H9 1805 aa27.32■■□□□ 1.96
LRRC20-207ENST00000446961 TOP2BQ02880 1626 aa27.3■■□□□ 1.96
LRRC20-207ENST00000446961 AEBP2Q6ZN18 517 aaPredicted RBP27.28■■□□□ 1.96
LRRC20-207ENST00000446961 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.952e-8■■■■■ 75.2
LRRC20-207ENST00000446961 ERICH3Q5RHP9 1530 aa27.23■■□□□ 1.95
LRRC20-207ENST00000446961 FHAD1B1AJZ9 1412 aa27.23■■□□□ 1.95
LRRC20-207ENST00000446961 RUSC2Q8N2Y8 1516 aa27.13■■□□□ 1.93
LRRC20-207ENST00000446961 PRG4Q92954 1404 aaPredicted RBP27.05■■□□□ 1.92
LRRC20-207ENST00000446961 MAPKBP1O60336 1514 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms