RNA–Protein interactions for RNA: ENST00000446930.1

RGPD6-204, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-204ENST00000446930 NISCHQ9Y2I1 1504 aa44.31■■■■■ 4.68
RGPD6-204ENST00000446930 CCDC180Q9P1Z9 1646 aa39.78■■■■□ 3.96
RGPD6-204ENST00000446930 ABCC9O60706 1549 aa39.4■■■■□ 3.9
RGPD6-204ENST00000446930 RB1CC1Q8TDY2 1594 aa37.72■■■■□ 3.63
RGPD6-204ENST00000446930 NACADO15069 1562 aa37.54■■■■□ 3.6
RGPD6-204ENST00000446930 MYO15BQ96JP2 1530 aa37.18■■■■□ 3.54
RGPD6-204ENST00000446930 DCAF8L2P0C7V8 631 aa37.04■■■■□ 3.52
RGPD6-204ENST00000446930 UNC13AQ9UPW8 1703 aa36.85■■■■□ 3.49
RGPD6-204ENST00000446930 ZCCHC6Q5VYS8 1495 aaKnown RBP36.78■■■■□ 3.48
RGPD6-204ENST00000446930 DNAJC5BQ9UF47 199 aa36.78■■■■□ 3.48
RGPD6-204ENST00000446930 DCAF1Q9Y4B6 1507 aa36.73■■■■□ 3.47
RGPD6-204ENST00000446930 PABPN1Q86U42 306 aaKnown RBP eCLIP36.63■■■■□ 3.45
RGPD6-204ENST00000446930 BICRAQ9NZM4 1560 aa36.61■■■■□ 3.45
RGPD6-204ENST00000446930 SHROOM4Q9ULL8 1493 aa36.29■■■■□ 3.4
RGPD6-204ENST00000446930 SCRIBQ14160 1630 aa36.08■■■■□ 3.37
RGPD6-204ENST00000446930 CC2D2AQ9P2K1 1620 aa35.68■■■■□ 3.3
RGPD6-204ENST00000446930 EIF4G1Q04637 1599 aaKnown RBP35.68■■■■□ 3.3
RGPD6-204ENST00000446930 CECR2Q9BXF3 1484 aa35.54■■■■□ 3.28
RGPD6-204ENST00000446930 NCAPD3P42695 1498 aa34.64■■■■□ 3.14
RGPD6-204ENST00000446930 SMARCA4P51532 1647 aa34.53■■■■□ 3.12
RGPD6-204ENST00000446930 ATAD2BQ9ULI0 1458 aa34.51■■■■□ 3.11
RGPD6-204ENST00000446930 SMARCA2P51531 1590 aa34.47■■■■□ 3.11
RGPD6-204ENST00000446930 HMGXB3Q12766 1538 aa34.43■■■■□ 3.1
RGPD6-204ENST00000446930 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
RGPD6-204ENST00000446930 PEG3Q9GZU2 1588 aa34.29■■■■□ 3.08
RGPD6-204ENST00000446930 BAZ1BQ9UIG0 1483 aaKnown RBP34.16■■■■□ 3.06
RGPD6-204ENST00000446930 MROH2BQ7Z745 1585 aa34.09■■■■□ 3.05
RGPD6-204ENST00000446930 CUX2O14529 1486 aa34.03■■■■□ 3.04
RGPD6-204ENST00000446930 ERCC6Q03468 1493 aa34.03■■■■□ 3.04
RGPD6-204ENST00000446930 NESP48681 1621 aa33.9■■■■□ 3.02
RGPD6-204ENST00000446930 LAMC3Q9Y6N6 1575 aa33.84■■■■□ 3.01
RGPD6-204ENST00000446930 DNAJC5Q9H3Z4 198 aa33.73■■■□□ 2.99
RGPD6-204ENST00000446930 WIZO95785 1651 aa33.68■■■□□ 2.98
RGPD6-204ENST00000446930 THOC2Q8NI27 1593 aaKnown RBP33.64■■■□□ 2.98
RGPD6-204ENST00000446930 PDS5BQ9NTI5 1447 aa33.59■■■□□ 2.97
RGPD6-204ENST00000446930 CADPSQ9ULU8 1353 aa33.54■■■□□ 2.96
RGPD6-204ENST00000446930 KIF21AQ7Z4S6 1674 aa33.54■■■□□ 2.96
RGPD6-204ENST00000446930 RSF1Q96T23 1441 aaPredicted RBP33.46■■■□□ 2.95
RGPD6-204ENST00000446930 TOP2AP11388 1531 aaKnown RBP33.33■■■□□ 2.93
RGPD6-204ENST00000446930 MRC2Q9UBG0 1479 aa33.28■■■□□ 2.92
RGPD6-204ENST00000446930 WDR62O43379 1518 aa33.23■■■□□ 2.91
RGPD6-204ENST00000446930 CFTRP13569 1480 aa33.23■■■□□ 2.91
RGPD6-204ENST00000446930 CEP164Q9UPV0 1460 aa33.18■■■□□ 2.9
RGPD6-204ENST00000446930 FANCD2Q9BXW9 1451 aa33.14■■■□□ 2.9
RGPD6-204ENST00000446930 PRDM2Q13029 1718 aa32.97■■■□□ 2.87
RGPD6-204ENST00000446930 CCDC88BA6NC98 1476 aa32.9■■■□□ 2.86
RGPD6-204ENST00000446930 URB2Q14146 1524 aaKnown RBP32.86■■■□□ 2.85
RGPD6-204ENST00000446930 ABCC8Q09428 1581 aa32.56■■■□□ 2.8
RGPD6-204ENST00000446930 TOPBP1Q92547 1522 aa32.55■■■□□ 2.8
RGPD6-204ENST00000446930 IFT140Q96RY7 1462 aa32.52■■■□□ 2.8
RGPD6-204ENST00000446930 DNMBPQ6XZF7 1577 aa32.47■■■□□ 2.79
RGPD6-204ENST00000446930 OSCARQ8IYS5 282 aa32.4■■■□□ 2.78
RGPD6-204ENST00000446930 ZNF608Q9ULD9 1512 aaPredicted RBP32.39■■■□□ 2.78
RGPD6-204ENST00000446930 TARBP1Q13395 1621 aaKnown RBP32.29■■■□□ 2.76
RGPD6-204ENST00000446930 EIF4G3O43432 1585 aaKnown RBP32.28■■■□□ 2.76
RGPD6-204ENST00000446930 POLA1P09884 1462 aaPredicted RBP32.23■■■□□ 2.75
RGPD6-204ENST00000446930 TRIM41Q8WV44 630 aa32.15■■■□□ 2.74
RGPD6-204ENST00000446930 AQRO60306 1485 aaKnown RBP eCLIP32.1■■■□□ 2.73
RGPD6-204ENST00000446930 WDR97A6NE52 1622 aa32.07■■■□□ 2.72
RGPD6-204ENST00000446930 SOGA1O94964 1423 aa32.04■■■□□ 2.72
RGPD6-204ENST00000446930 CUX1P39880 1505 aa32.04■■■□□ 2.72
RGPD6-204ENST00000446930 FGD5Q6ZNL6 1462 aa32.02■■■□□ 2.72
RGPD6-204ENST00000446930 RAD54L2Q9Y4B4 1467 aa32.02■■■□□ 2.72
RGPD6-204ENST00000446930 RIMBP3CA6NJZ7 1639 aa31.99■■■□□ 2.71
RGPD6-204ENST00000446930 RIMBP3BA6NNM3 1639 aa31.99■■■□□ 2.71
RGPD6-204ENST00000446930 RIMBP3Q9UFD9 1639 aa31.99■■■□□ 2.71
RGPD6-204ENST00000446930 CHD1O14646 1710 aa31.98■■■□□ 2.71
RGPD6-204ENST00000446930 ARHGEF11O15085 1522 aa31.92■■■□□ 2.7
RGPD6-204ENST00000446930 TDRD9Q8NDG6 1382 aaKnown RBP31.91■■■□□ 2.7
RGPD6-204ENST00000446930 SUPT5HO00267 1087 aaKnown RBP31.9■■■□□ 2.7
RGPD6-204ENST00000446930 MAGI1Q96QZ7 1491 aaPredicted RBP31.82■■■□□ 2.68
RGPD6-204ENST00000446930 SNAPC4Q5SXM2 1469 aa31.8■■■□□ 2.68
RGPD6-204ENST00000446930 GRIN2BQ13224 1484 aa31.79■■■□□ 2.68
RGPD6-204ENST00000446930 FBLN2P98095 1184 aa31.75■■■□□ 2.67
RGPD6-204ENST00000446930 ABCA10Q8WWZ4 1543 aa31.74■■■□□ 2.67
RGPD6-204ENST00000446930 SYNJ2O15056 1496 aa31.68■■■□□ 2.66
RGPD6-204ENST00000446930 GAPVD1Q14C86 1478 aa31.68■■■□□ 2.66
RGPD6-204ENST00000446930 CLASP1Q7Z460 1538 aa31.68■■■□□ 2.66
RGPD6-204ENST00000446930 ABCA5Q8WWZ7 1642 aa31.67■■■□□ 2.66
RGPD6-204ENST00000446930 PBRM1Q86U86 1689 aa31.67■■■□□ 2.66
RGPD6-204ENST00000446930 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
RGPD6-204ENST00000446930 BIVM-ERCC5R4GMW8 1640 aa31.63■■■□□ 2.65
RGPD6-204ENST00000446930 TOP2BQ02880 1626 aa31.62■■■□□ 2.65
RGPD6-204ENST00000446930 CHMP7Q8WUX9 453 aaPredicted RBP31.62■■■□□ 2.65
RGPD6-204ENST00000446930 ARAP1Q96P48 1450 aa31.61■■■□□ 2.65
RGPD6-204ENST00000446930 WRNQ14191 1432 aaPredicted RBP eCLIP31.61■■■□□ 2.65
RGPD6-204ENST00000446930 CYB5RLQ6IPT4 315 aa31.55■■■□□ 2.64
RGPD6-204ENST00000446930 ADAMTS12P58397 1594 aa31.4■■■□□ 2.62
RGPD6-204ENST00000446930 GRIN2AQ12879 1464 aa31.39■■■□□ 2.62
RGPD6-204ENST00000446930 ERICH3Q5RHP9 1530 aa31.35■■■□□ 2.61
RGPD6-204ENST00000446930 FHAD1B1AJZ9 1412 aa31.31■■■□□ 2.6
RGPD6-204ENST00000446930 NUP160Q12769 1436 aa31.31■■■□□ 2.6
RGPD6-204ENST00000446930 CEP170Q5SW79 1584 aa31.25■■■□□ 2.59
RGPD6-204ENST00000446930 SHROOM2Q13796 1616 aa31.18■■■□□ 2.58
RGPD6-204ENST00000446930 TRHP20396 242 aaPredicted RBP31.1■■■□□ 2.57
RGPD6-204ENST00000446930 ERCC6L2Q5T890 1561 aa31.09■■■□□ 2.57
RGPD6-204ENST00000446930 RUSC2Q8N2Y8 1516 aa30.97■■■□□ 2.55
RGPD6-204ENST00000446930 KIF27Q86VH2 1401 aa30.96■■■□□ 2.55
RGPD6-204ENST00000446930 CUL7Q14999 1698 aa30.93■■■□□ 2.54
RGPD6-204ENST00000446930 IGF1RP08069 1367 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms