RNA–Protein interactions for RNA: ENST00000446803.6

TBC1D1-209, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-209ENST00000446803 NISCHQ9Y2I1 1504 aa53.38■■■■■ 6.14
TBC1D1-209ENST00000446803 CCDC180Q9P1Z9 1646 aa46.65■■■■■ 5.06
TBC1D1-209ENST00000446803 ZCCHC6Q5VYS8 1495 aaKnown RBP44.78■■■■■ 4.76
TBC1D1-209ENST00000446803 ABCC9O60706 1549 aa44.37■■■■■ 4.69
TBC1D1-209ENST00000446803 DCAF8L2P0C7V8 631 aa44.29■■■■■ 4.68
TBC1D1-209ENST00000446803 DCAF1Q9Y4B6 1507 aa44.08■■■■■ 4.65
TBC1D1-209ENST00000446803 MYO15BQ96JP2 1530 aa43.63■■■■■ 4.57
TBC1D1-209ENST00000446803 NACADO15069 1562 aa43.5■■■■■ 4.55
TBC1D1-209ENST00000446803 SHROOM4Q9ULL8 1493 aa43.49■■■■■ 4.55
TBC1D1-209ENST00000446803 RB1CC1Q8TDY2 1594 aa43.2■■■■■ 4.51
TBC1D1-209ENST00000446803 SCRIBQ14160 1630 aa42.93■■■■■ 4.46
TBC1D1-209ENST00000446803 UNC13AQ9UPW8 1703 aa42.39■■■■■ 4.38
TBC1D1-209ENST00000446803 BICRAQ9NZM4 1560 aa41.9■■■■■ 4.3
TBC1D1-209ENST00000446803 PABPN1Q86U42 306 aaKnown RBP eCLIP41.83■■■■■ 4.29
TBC1D1-209ENST00000446803 SUPT5HO00267 1087 aaKnown RBP41.74■■■■■ 4.27
TBC1D1-209ENST00000446803 CECR2Q9BXF3 1484 aa41.52■■■■■ 4.24
TBC1D1-209ENST00000446803 RSF1Q96T23 1441 aaPredicted RBP41.32■■■■■ 4.21
TBC1D1-209ENST00000446803 MROH2BQ7Z745 1585 aa41.25■■■■■ 4.19
TBC1D1-209ENST00000446803 BAZ1AQ9NRL2 1556 aaPredicted RBP41.23■■■■■ 4.19
TBC1D1-209ENST00000446803 SMARCA4P51532 1647 aa41.1■■■■■ 4.17
TBC1D1-209ENST00000446803 WIZO95785 1651 aa40.94■■■■■ 4.14
TBC1D1-209ENST00000446803 EIF4G1Q04637 1599 aaKnown RBP40.66■■■■■ 4.1
TBC1D1-209ENST00000446803 PEG3Q9GZU2 1588 aa40.56■■■■■ 4.08
TBC1D1-209ENST00000446803 ATAD2BQ9ULI0 1458 aa40.46■■■■■ 4.07
TBC1D1-209ENST00000446803 TOP2AP11388 1531 aaKnown RBP40.45■■■■■ 4.07
TBC1D1-209ENST00000446803 SMARCA2P51531 1590 aa40.43■■■■■ 4.06
TBC1D1-209ENST00000446803 BAZ1BQ9UIG0 1483 aaKnown RBP40.25■■■■■ 4.03
TBC1D1-209ENST00000446803 CC2D2AQ9P2K1 1620 aa40.14■■■■■ 4.02
TBC1D1-209ENST00000446803 NCAPD3P42695 1498 aa40.13■■■■■ 4.01
TBC1D1-209ENST00000446803 CCDC88BA6NC98 1476 aa40.06■■■■■ 4
TBC1D1-209ENST00000446803 HMGXB3Q12766 1538 aa40.06■■■■■ 4
TBC1D1-209ENST00000446803 CHIC1Q5VXU3 224 aa39.77■■■■□ 3.96
TBC1D1-209ENST00000446803 DNAJC5BQ9UF47 199 aa39.33■■■■□ 3.89
TBC1D1-209ENST00000446803 TRIM41Q8WV44 630 aa39.23■■■■□ 3.87
TBC1D1-209ENST00000446803 CFTRP13569 1480 aa39.19■■■■□ 3.86
TBC1D1-209ENST00000446803 ABCC8Q09428 1581 aa39.18■■■■□ 3.86
TBC1D1-209ENST00000446803 CADPSQ9ULU8 1353 aa39.11■■■■□ 3.85
TBC1D1-209ENST00000446803 PRDM2Q13029 1718 aa39.04■■■■□ 3.84
TBC1D1-209ENST00000446803 WRNQ14191 1432 aaPredicted RBP eCLIP38.92■■■■□ 3.82
TBC1D1-209ENST00000446803 NESP48681 1621 aa38.89■■■■□ 3.82
TBC1D1-209ENST00000446803 LAMC3Q9Y6N6 1575 aa38.83■■■■□ 3.81
TBC1D1-209ENST00000446803 SYNJ1O43426 1573 aa38.78■■■■□ 3.8
TBC1D1-209ENST00000446803 FANCD2Q9BXW9 1451 aa38.7■■■■□ 3.79
TBC1D1-209ENST00000446803 TOP2BQ02880 1626 aa38.63■■■■□ 3.77
TBC1D1-209ENST00000446803 BIVM-ERCC5R4GMW8 1640 aa38.59■■■■□ 3.77
TBC1D1-209ENST00000446803 CUX1P39880 1505 aa38.59■■■■□ 3.77
TBC1D1-209ENST00000446803 FAM9AQ8IZU1 332 aaPredicted RBP38.55■■■■□ 3.76
TBC1D1-209ENST00000446803 PDS5BQ9NTI5 1447 aa38.54■■■■□ 3.76
TBC1D1-209ENST00000446803 CEP164Q9UPV0 1460 aa38.48■■■■□ 3.75
TBC1D1-209ENST00000446803 KIF21AQ7Z4S6 1674 aa38.44■■■■□ 3.74
TBC1D1-209ENST00000446803 SOGA1O94964 1423 aa38.38■■■■□ 3.73
TBC1D1-209ENST00000446803 DNMBPQ6XZF7 1577 aa38.3■■■■□ 3.72
TBC1D1-209ENST00000446803 LOC105371045A0A1W2PR82 267 aa38.3■■■■□ 3.72
TBC1D1-209ENST00000446803 RUSC2Q8N2Y8 1516 aa38.26■■■■□ 3.72
TBC1D1-209ENST00000446803 TOPBP1Q92547 1522 aa38.25■■■■□ 3.71
TBC1D1-209ENST00000446803 URB2Q14146 1524 aaKnown RBP38.22■■■■□ 3.71
TBC1D1-209ENST00000446803 EEA1Q15075 1411 aa38.2■■■■□ 3.71
TBC1D1-209ENST00000446803 FGD5Q6ZNL6 1462 aa38.2■■■■□ 3.71
TBC1D1-209ENST00000446803 ERCC6Q03468 1493 aa38.07■■■■□ 3.69
TBC1D1-209ENST00000446803 CSRNP3Q8WYN3 585 aa38.07■■■■□ 3.68
TBC1D1-209ENST00000446803 EHMT2Q96KQ7 1210 aa38.07■■■■□ 3.68
TBC1D1-209ENST00000446803 MRC2Q9UBG0 1479 aa38.06■■■■□ 3.68
TBC1D1-209ENST00000446803 POLA1P09884 1462 aaPredicted RBP38.05■■■■□ 3.68
TBC1D1-209ENST00000446803 KIF27Q86VH2 1401 aa37.95■■■■□ 3.67
TBC1D1-209ENST00000446803 RAD54L2Q9Y4B4 1467 aa37.95■■■■□ 3.67
TBC1D1-209ENST00000446803 CUX2O14529 1486 aa37.92■■■■□ 3.66
TBC1D1-209ENST00000446803 WDR62O43379 1518 aa37.86■■■■□ 3.65
TBC1D1-209ENST00000446803 ABCA10Q8WWZ4 1543 aa37.83■■■■□ 3.65
TBC1D1-209ENST00000446803 THOC2Q8NI27 1593 aaKnown RBP37.81■■■■□ 3.64
TBC1D1-209ENST00000446803 WDR97A6NE52 1622 aa37.76■■■■□ 3.63
TBC1D1-209ENST00000446803 KIF21BO75037 1637 aa37.75■■■■□ 3.63
TBC1D1-209ENST00000446803 GOLGA3Q08378 1498 aa37.7■■■■□ 3.63
TBC1D1-209ENST00000446803 TARBP1Q13395 1621 aaKnown RBP37.7■■■■□ 3.62
TBC1D1-209ENST00000446803 IGF1RP08069 1367 aa37.63■■■■□ 3.61
TBC1D1-209ENST00000446803 UBTFP17480 764 aaKnown RBP37.62■■■■□ 3.61
TBC1D1-209ENST00000446803 PRXQ9BXM0 1461 aa37.61■■■■□ 3.61
TBC1D1-209ENST00000446803 RAPGEF2Q9Y4G8 1499 aa37.61■■■■□ 3.61
TBC1D1-209ENST00000446803 TDRD9Q8NDG6 1382 aaKnown RBP37.61■■■■□ 3.61
TBC1D1-209ENST00000446803 ABCA5Q8WWZ7 1642 aa37.56■■■■□ 3.6
TBC1D1-209ENST00000446803 IFT140Q96RY7 1462 aa37.55■■■■□ 3.6
TBC1D1-209ENST00000446803 ERICH3Q5RHP9 1530 aa37.53■■■■□ 3.6
TBC1D1-209ENST00000446803 TNIKQ9UKE5 1360 aa37.53■■■■□ 3.6
TBC1D1-209ENST00000446803 GAPVD1Q14C86 1478 aa37.51■■■■□ 3.6
TBC1D1-209ENST00000446803 CARMIL1Q5VZK9 1371 aa37.46■■■■□ 3.59
TBC1D1-209ENST00000446803 AQRO60306 1485 aaKnown RBP eCLIP37.4■■■■□ 3.58
TBC1D1-209ENST00000446803 ZNF608Q9ULD9 1512 aaPredicted RBP37.39■■■■□ 3.58
TBC1D1-209ENST00000446803 CUL7Q14999 1698 aa37.38■■■■□ 3.57
TBC1D1-209ENST00000446803 PBRM1Q86U86 1689 aa37.35■■■■□ 3.57
TBC1D1-209ENST00000446803 CEP162Q5TB80 1403 aa37.34■■■■□ 3.57
TBC1D1-209ENST00000446803 EIF4G3O43432 1585 aaKnown RBP37.26■■■■□ 3.55
TBC1D1-209ENST00000446803 GRIN2BQ13224 1484 aa37.24■■■■□ 3.55
TBC1D1-209ENST00000446803 RANGAP1P46060 587 aaPredicted RBP37.14■■■■□ 3.54
TBC1D1-209ENST00000446803 CLIP1P30622 1438 aa37.11■■■■□ 3.53
TBC1D1-209ENST00000446803 ADAMTS12P58397 1594 aa37.09■■■■□ 3.53
TBC1D1-209ENST00000446803 FHAD1B1AJZ9 1412 aa37.08■■■■□ 3.53
TBC1D1-209ENST00000446803 SNAPC4Q5SXM2 1469 aa37.04■■■■□ 3.52
TBC1D1-209ENST00000446803 CTTNBP2Q8WZ74 1663 aa36.97■■■■□ 3.51
TBC1D1-209ENST00000446803 MAGI1Q96QZ7 1491 aaPredicted RBP36.94■■■■□ 3.5
TBC1D1-209ENST00000446803 SYNJ2O15056 1496 aa36.81■■■■□ 3.48
TBC1D1-209ENST00000446803 ARHGAP35Q9NRY4 1499 aa36.8■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms