RNA–Protein interactions for RNA: ENST00000446792.1

C1orf228-215, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 5

Gene C1orf228, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-215ENST00000446792 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
C1orf228-215ENST00000446792 ABCC9O60706 1549 aa28.86■■■□□ 2.21
C1orf228-215ENST00000446792 CCDC180Q9P1Z9 1646 aa28.66■■■□□ 2.18
C1orf228-215ENST00000446792 RB1CC1Q8TDY2 1594 aa27.41■■□□□ 1.98
C1orf228-215ENST00000446792 DNAJC5BQ9UF47 199 aa27.22■■□□□ 1.95
C1orf228-215ENST00000446792 NACADO15069 1562 aa27.1■■□□□ 1.93
C1orf228-215ENST00000446792 UNC13AQ9UPW8 1703 aa26.82■■□□□ 1.88
C1orf228-215ENST00000446792 DCAF8L2P0C7V8 631 aa26.79■■□□□ 1.88
C1orf228-215ENST00000446792 PABPN1Q86U42 306 aaKnown RBP eCLIP26.73■■□□□ 1.87
C1orf228-215ENST00000446792 MYO15BQ96JP2 1530 aa26.57■■□□□ 1.84
C1orf228-215ENST00000446792 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
C1orf228-215ENST00000446792 SHROOM4Q9ULL8 1493 aa26.23■■□□□ 1.79
C1orf228-215ENST00000446792 ZCCHC6Q5VYS8 1495 aaKnown RBP26.12■■□□□ 1.77
C1orf228-215ENST00000446792 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
C1orf228-215ENST00000446792 DCAF1Q9Y4B6 1507 aa26.1■■□□□ 1.77
C1orf228-215ENST00000446792 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
C1orf228-215ENST00000446792 SCRIBQ14160 1630 aa26.03■■□□□ 1.76
C1orf228-215ENST00000446792 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
C1orf228-215ENST00000446792 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
C1orf228-215ENST00000446792 CUX2O14529 1486 aa25.08■■□□□ 1.6
C1orf228-215ENST00000446792 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
C1orf228-215ENST00000446792 NCAPD3P42695 1498 aa24.94■■□□□ 1.58
C1orf228-215ENST00000446792 SMARCA2P51531 1590 aa24.83■■□□□ 1.57
C1orf228-215ENST00000446792 ATAD2BQ9ULI0 1458 aa24.82■■□□□ 1.56
C1orf228-215ENST00000446792 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
C1orf228-215ENST00000446792 SMARCA4P51532 1647 aa24.79■■□□□ 1.56
C1orf228-215ENST00000446792 NESP48681 1621 aa24.66■■□□□ 1.54
C1orf228-215ENST00000446792 BAZ1BQ9UIG0 1483 aaKnown RBP24.63■■□□□ 1.53
C1orf228-215ENST00000446792 BAZ1AQ9NRL2 1556 aaPredicted RBP24.61■■□□□ 1.53
C1orf228-215ENST00000446792 THOC2Q8NI27 1593 aaKnown RBP24.58■■□□□ 1.52
C1orf228-215ENST00000446792 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
C1orf228-215ENST00000446792 PEG3Q9GZU2 1588 aa24.52■■□□□ 1.52
C1orf228-215ENST00000446792 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
C1orf228-215ENST00000446792 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
C1orf228-215ENST00000446792 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
C1orf228-215ENST00000446792 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
C1orf228-215ENST00000446792 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
C1orf228-215ENST00000446792 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
C1orf228-215ENST00000446792 WDR62O43379 1518 aa24.15■■□□□ 1.46
C1orf228-215ENST00000446792 WIZO95785 1651 aa24.07■■□□□ 1.44
C1orf228-215ENST00000446792 CEP164Q9UPV0 1460 aa24.05■■□□□ 1.44
C1orf228-215ENST00000446792 FANCD2Q9BXW9 1451 aa23.94■■□□□ 1.42
C1orf228-215ENST00000446792 CFTRP13569 1480 aa23.82■■□□□ 1.4
C1orf228-215ENST00000446792 OSCARQ8IYS5 282 aa23.79■■□□□ 1.4
C1orf228-215ENST00000446792 PRDM2Q13029 1718 aa23.78■■□□□ 1.4
C1orf228-215ENST00000446792 TOP2AP11388 1531 aaKnown RBP23.75■■□□□ 1.39
C1orf228-215ENST00000446792 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
C1orf228-215ENST00000446792 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
C1orf228-215ENST00000446792 RIMBP3CA6NJZ7 1639 aa23.62■■□□□ 1.37
C1orf228-215ENST00000446792 RIMBP3BA6NNM3 1639 aa23.62■■□□□ 1.37
C1orf228-215ENST00000446792 RIMBP3Q9UFD9 1639 aa23.62■■□□□ 1.37
C1orf228-215ENST00000446792 IFT140Q96RY7 1462 aa23.55■■□□□ 1.36
C1orf228-215ENST00000446792 ZNF608Q9ULD9 1512 aaPredicted RBP23.48■■□□□ 1.35
C1orf228-215ENST00000446792 ARHGEF11O15085 1522 aa23.47■■□□□ 1.35
C1orf228-215ENST00000446792 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
C1orf228-215ENST00000446792 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
C1orf228-215ENST00000446792 ABCC8Q09428 1581 aa23.41■■□□□ 1.34
C1orf228-215ENST00000446792 CCDC88BA6NC98 1476 aa23.41■■□□□ 1.34
C1orf228-215ENST00000446792 CHD1O14646 1710 aa23.39■■□□□ 1.33
C1orf228-215ENST00000446792 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
C1orf228-215ENST00000446792 TARBP1Q13395 1621 aaKnown RBP23.28■■□□□ 1.32
C1orf228-215ENST00000446792 CYB5RLQ6IPT4 315 aa23.25■■□□□ 1.31
C1orf228-215ENST00000446792 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.31
C1orf228-215ENST00000446792 ARAP1Q96P48 1450 aa23.18■■□□□ 1.3
C1orf228-215ENST00000446792 FBLN2P98095 1184 aa23.17■■□□□ 1.3
C1orf228-215ENST00000446792 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
C1orf228-215ENST00000446792 TRHP20396 242 aaPredicted RBP23.16■■□□□ 1.3
C1orf228-215ENST00000446792 WDR97A6NE52 1622 aa23.11■■□□□ 1.29
C1orf228-215ENST00000446792 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
C1orf228-215ENST00000446792 SYNJ1O43426 1573 aa23.04■■□□□ 1.28
C1orf228-215ENST00000446792 SOGA1O94964 1423 aa23.03■■□□□ 1.28
C1orf228-215ENST00000446792 SNAPC4Q5SXM2 1469 aa23.03■■□□□ 1.28
C1orf228-215ENST00000446792 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
C1orf228-215ENST00000446792 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
C1orf228-215ENST00000446792 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
C1orf228-215ENST00000446792 MAGI1Q96QZ7 1491 aaPredicted RBP22.98■■□□□ 1.27
C1orf228-215ENST00000446792 CHMP7Q8WUX9 453 aaPredicted RBP22.94■■□□□ 1.26
C1orf228-215ENST00000446792 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
C1orf228-215ENST00000446792 GRIN2BQ13224 1484 aa22.92■■□□□ 1.26
C1orf228-215ENST00000446792 CUX1P39880 1505 aa22.89■■□□□ 1.26
C1orf228-215ENST00000446792 SYNJ2O15056 1496 aa22.89■■□□□ 1.25
C1orf228-215ENST00000446792 AEBP2Q6ZN18 517 aaPredicted RBP22.8■■□□□ 1.24
C1orf228-215ENST00000446792 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
C1orf228-215ENST00000446792 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
C1orf228-215ENST00000446792 ABCA10Q8WWZ4 1543 aa22.7■■□□□ 1.22
C1orf228-215ENST00000446792 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
C1orf228-215ENST00000446792 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
C1orf228-215ENST00000446792 ERCC6L2Q5T890 1561 aa22.59■■□□□ 1.21
C1orf228-215ENST00000446792 CEP170Q5SW79 1584 aa22.58■■□□□ 1.2
C1orf228-215ENST00000446792 WRNQ14191 1432 aaPredicted RBP eCLIP22.54■■□□□ 1.2
C1orf228-215ENST00000446792 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
C1orf228-215ENST00000446792 NUP160Q12769 1436 aa22.53■■□□□ 1.2
C1orf228-215ENST00000446792 BIVM-ERCC5R4GMW8 1640 aa22.52■■□□□ 1.2
C1orf228-215ENST00000446792 KIF13AQ9H1H9 1805 aa22.48■■□□□ 1.19
C1orf228-215ENST00000446792 TOP2BQ02880 1626 aa22.48■■□□□ 1.19
C1orf228-215ENST00000446792 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
C1orf228-215ENST00000446792 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
C1orf228-215ENST00000446792 PRG4Q92954 1404 aaPredicted RBP22.34■■□□□ 1.17
C1orf228-215ENST00000446792 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
C1orf228-215ENST00000446792 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms