RNA–Protein interactions for RNA: ENST00000446677.2

PTGDS-205, Transcript of prostaglandin D2 synthase, humanhuman

TSL 3

Gene PTGDS, Length 553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGDS-205ENST00000446677 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
PTGDS-205ENST00000446677 ABCC9O60706 1549 aa30.27■■■□□ 2.44
PTGDS-205ENST00000446677 CCDC180Q9P1Z9 1646 aa30.04■■■□□ 2.4
PTGDS-205ENST00000446677 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
PTGDS-205ENST00000446677 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
PTGDS-205ENST00000446677 NACADO15069 1562 aa28.42■■■□□ 2.14
PTGDS-205ENST00000446677 UNC13AQ9UPW8 1703 aa28.14■■■□□ 2.1
PTGDS-205ENST00000446677 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
PTGDS-205ENST00000446677 PABPN1Q86U42 306 aaKnown RBP eCLIP28.08■■■□□ 2.09
PTGDS-205ENST00000446677 MYO15BQ96JP2 1530 aa27.9■■■□□ 2.06
PTGDS-205ENST00000446677 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
PTGDS-205ENST00000446677 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
PTGDS-205ENST00000446677 ZCCHC6Q5VYS8 1495 aaKnown RBP27.47■■□□□ 1.99
PTGDS-205ENST00000446677 DCAF1Q9Y4B6 1507 aa27.43■■□□□ 1.98
PTGDS-205ENST00000446677 CC2D2AQ9P2K1 1620 aa27.37■■□□□ 1.97
PTGDS-205ENST00000446677 SCRIBQ14160 1630 aa27.32■■□□□ 1.96
PTGDS-205ENST00000446677 CECR2Q9BXF3 1484 aa27.31■■□□□ 1.96
PTGDS-205ENST00000446677 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
PTGDS-205ENST00000446677 DNAJC5Q9H3Z4 198 aa26.53■■□□□ 1.84
PTGDS-205ENST00000446677 CUX2O14529 1486 aa26.25■■□□□ 1.79
PTGDS-205ENST00000446677 NCAPD3P42695 1498 aa26.19■■□□□ 1.78
PTGDS-205ENST00000446677 ERCC6Q03468 1493 aa26.19■■□□□ 1.78
PTGDS-205ENST00000446677 ATAD2BQ9ULI0 1458 aa26.08■■□□□ 1.77
PTGDS-205ENST00000446677 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
PTGDS-205ENST00000446677 HMGXB3Q12766 1538 aa26.03■■□□□ 1.76
PTGDS-205ENST00000446677 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
PTGDS-205ENST00000446677 NESP48681 1621 aa25.91■■□□□ 1.74
PTGDS-205ENST00000446677 BAZ1BQ9UIG0 1483 aaKnown RBP25.84■■□□□ 1.73
PTGDS-205ENST00000446677 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
PTGDS-205ENST00000446677 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
PTGDS-205ENST00000446677 PEG3Q9GZU2 1588 aa25.76■■□□□ 1.71
PTGDS-205ENST00000446677 LAMC3Q9Y6N6 1575 aa25.73■■□□□ 1.71
PTGDS-205ENST00000446677 KIF21AQ7Z4S6 1674 aa25.65■■□□□ 1.7
PTGDS-205ENST00000446677 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
PTGDS-205ENST00000446677 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
PTGDS-205ENST00000446677 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
PTGDS-205ENST00000446677 MRC2Q9UBG0 1479 aa25.36■■□□□ 1.65
PTGDS-205ENST00000446677 WDR62O43379 1518 aa25.32■■□□□ 1.64
PTGDS-205ENST00000446677 WIZO95785 1651 aa25.31■■□□□ 1.64
PTGDS-205ENST00000446677 TRIM41Q8WV44 630 aa25.27■■□□□ 1.64
PTGDS-205ENST00000446677 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
PTGDS-205ENST00000446677 FANCD2Q9BXW9 1451 aa25.13■■□□□ 1.61
PTGDS-205ENST00000446677 CFTRP13569 1480 aa25.03■■□□□ 1.6
PTGDS-205ENST00000446677 TOP2AP11388 1531 aaKnown RBP24.96■■□□□ 1.59
PTGDS-205ENST00000446677 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
PTGDS-205ENST00000446677 OSCARQ8IYS5 282 aa24.93■■□□□ 1.58
PTGDS-205ENST00000446677 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
PTGDS-205ENST00000446677 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
PTGDS-205ENST00000446677 RIMBP3CA6NJZ7 1639 aa24.74■■□□□ 1.55
PTGDS-205ENST00000446677 RIMBP3BA6NNM3 1639 aa24.74■■□□□ 1.55
PTGDS-205ENST00000446677 RIMBP3Q9UFD9 1639 aa24.74■■□□□ 1.55
PTGDS-205ENST00000446677 IFT140Q96RY7 1462 aa24.7■■□□□ 1.54
PTGDS-205ENST00000446677 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
PTGDS-205ENST00000446677 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
PTGDS-205ENST00000446677 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
PTGDS-205ENST00000446677 ARHGEF11O15085 1522 aa24.6■■□□□ 1.53
PTGDS-205ENST00000446677 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
PTGDS-205ENST00000446677 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
PTGDS-205ENST00000446677 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
PTGDS-205ENST00000446677 CHD1O14646 1710 aa24.5■■□□□ 1.51
PTGDS-205ENST00000446677 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
PTGDS-205ENST00000446677 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.5
PTGDS-205ENST00000446677 CYB5RLQ6IPT4 315 aa24.37■■□□□ 1.49
PTGDS-205ENST00000446677 POLA1P09884 1462 aaPredicted RBP24.34■■□□□ 1.49
PTGDS-205ENST00000446677 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
PTGDS-205ENST00000446677 FBLN2P98095 1184 aa24.3■■□□□ 1.48
PTGDS-205ENST00000446677 TRHP20396 242 aaPredicted RBP24.24■■□□□ 1.47
PTGDS-205ENST00000446677 RAD54L2Q9Y4B4 1467 aa24.24■■□□□ 1.47
PTGDS-205ENST00000446677 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
PTGDS-205ENST00000446677 SOGA1O94964 1423 aa24.2■■□□□ 1.46
PTGDS-205ENST00000446677 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
PTGDS-205ENST00000446677 SNAPC4Q5SXM2 1469 aa24.17■■□□□ 1.46
PTGDS-205ENST00000446677 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
PTGDS-205ENST00000446677 FGD5Q6ZNL6 1462 aa24.15■■□□□ 1.46
PTGDS-205ENST00000446677 SYNJ1O43426 1573 aa24.13■■□□□ 1.45
PTGDS-205ENST00000446677 MAGI1Q96QZ7 1491 aaPredicted RBP24.1■■□□□ 1.45
PTGDS-205ENST00000446677 CUX1P39880 1505 aa24.07■■□□□ 1.44
PTGDS-205ENST00000446677 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
PTGDS-205ENST00000446677 GRIN2BQ13224 1484 aa24.06■■□□□ 1.44
PTGDS-205ENST00000446677 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
PTGDS-205ENST00000446677 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
PTGDS-205ENST00000446677 GAPVD1Q14C86 1478 aa23.92■■□□□ 1.42
PTGDS-205ENST00000446677 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
PTGDS-205ENST00000446677 ABCA10Q8WWZ4 1543 aa23.85■■□□□ 1.41
PTGDS-205ENST00000446677 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
PTGDS-205ENST00000446677 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
PTGDS-205ENST00000446677 ERCC6L2Q5T890 1561 aa23.74■■□□□ 1.39
PTGDS-205ENST00000446677 ADAMTS12P58397 1594 aa23.73■■□□□ 1.39
PTGDS-205ENST00000446677 CEP170Q5SW79 1584 aa23.7■■□□□ 1.38
PTGDS-205ENST00000446677 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
PTGDS-205ENST00000446677 NUP160Q12769 1436 aa23.67■■□□□ 1.38
PTGDS-205ENST00000446677 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
PTGDS-205ENST00000446677 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
PTGDS-205ENST00000446677 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
PTGDS-205ENST00000446677 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
PTGDS-205ENST00000446677 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
PTGDS-205ENST00000446677 KIF13AQ9H1H9 1805 aa23.56■■□□□ 1.36
PTGDS-205ENST00000446677 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
PTGDS-205ENST00000446677 PRG4Q92954 1404 aaPredicted RBP23.46■■□□□ 1.35
PTGDS-205ENST00000446677 RUSC2Q8N2Y8 1516 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms