RNA–Protein interactions for RNA: ENST00000446621.1

SFPQP1-201, Transcript of splicing factor proline and glutamine rich pseudogene 1, humanhuman

BASIC

Gene SFPQP1, Length 1,786 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP1-201ENST00000446621 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
SFPQP1-201ENST00000446621 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
SFPQP1-201ENST00000446621 ABCC9O60706 1549 aa27.89■■■□□ 2.06
SFPQP1-201ENST00000446621 RB1CC1Q8TDY2 1594 aa26.69■■□□□ 1.86
SFPQP1-201ENST00000446621 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
SFPQP1-201ENST00000446621 NACADO15069 1562 aa26.58■■□□□ 1.85
SFPQP1-201ENST00000446621 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
SFPQP1-201ENST00000446621 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
SFPQP1-201ENST00000446621 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
SFPQP1-201ENST00000446621 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
SFPQP1-201ENST00000446621 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
SFPQP1-201ENST00000446621 BICRAQ9NZM4 1560 aa25.88■■□□□ 1.73
SFPQP1-201ENST00000446621 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
SFPQP1-201ENST00000446621 DNAJC5BQ9UF47 199 aa25.79■■□□□ 1.72
SFPQP1-201ENST00000446621 SHROOM4Q9ULL8 1493 aa25.53■■□□□ 1.68
SFPQP1-201ENST00000446621 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
SFPQP1-201ENST00000446621 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.62
SFPQP1-201ENST00000446621 CECR2Q9BXF3 1484 aa25.06■■□□□ 1.6
SFPQP1-201ENST00000446621 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
SFPQP1-201ENST00000446621 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
SFPQP1-201ENST00000446621 ATAD2BQ9ULI0 1458 aa24.52■■□□□ 1.52
SFPQP1-201ENST00000446621 NCAPD3P42695 1498 aa24.51■■□□□ 1.51
SFPQP1-201ENST00000446621 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
SFPQP1-201ENST00000446621 MROH2BQ7Z745 1585 aa24.39■■□□□ 1.5
SFPQP1-201ENST00000446621 HMGXB3Q12766 1538 aa24.38■■□□□ 1.49
SFPQP1-201ENST00000446621 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
SFPQP1-201ENST00000446621 PEG3Q9GZU2 1588 aa24.33■■□□□ 1.49
SFPQP1-201ENST00000446621 WIZO95785 1651 aa24.15■■□□□ 1.46
SFPQP1-201ENST00000446621 ERCC6Q03468 1493 aa24.06■■□□□ 1.44
SFPQP1-201ENST00000446621 NESP48681 1621 aa24.06■■□□□ 1.44
SFPQP1-201ENST00000446621 RSF1Q96T23 1441 aaPredicted RBP24.02■■□□□ 1.44
SFPQP1-201ENST00000446621 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
SFPQP1-201ENST00000446621 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
SFPQP1-201ENST00000446621 CUX2O14529 1486 aa23.83■■□□□ 1.41
SFPQP1-201ENST00000446621 CADPSQ9ULU8 1353 aa23.81■■□□□ 1.4
SFPQP1-201ENST00000446621 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
SFPQP1-201ENST00000446621 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
SFPQP1-201ENST00000446621 THOC2Q8NI27 1593 aaKnown RBP23.72■■□□□ 1.39
SFPQP1-201ENST00000446621 CFTRP13569 1480 aa23.61■■□□□ 1.37
SFPQP1-201ENST00000446621 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.36
SFPQP1-201ENST00000446621 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
SFPQP1-201ENST00000446621 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
SFPQP1-201ENST00000446621 CEP164Q9UPV0 1460 aa23.56■■□□□ 1.36
SFPQP1-201ENST00000446621 WDR62O43379 1518 aa23.48■■□□□ 1.35
SFPQP1-201ENST00000446621 PRDM2Q13029 1718 aa23.45■■□□□ 1.34
SFPQP1-201ENST00000446621 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
SFPQP1-201ENST00000446621 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
SFPQP1-201ENST00000446621 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
SFPQP1-201ENST00000446621 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
SFPQP1-201ENST00000446621 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
SFPQP1-201ENST00000446621 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
SFPQP1-201ENST00000446621 IFT140Q96RY7 1462 aa23.05■■□□□ 1.28
SFPQP1-201ENST00000446621 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
SFPQP1-201ENST00000446621 POLA1P09884 1462 aaPredicted RBP22.94■■□□□ 1.26
SFPQP1-201ENST00000446621 TARBP1Q13395 1621 aaKnown RBP22.92■■□□□ 1.26
SFPQP1-201ENST00000446621 CUX1P39880 1505 aa22.91■■□□□ 1.26
SFPQP1-201ENST00000446621 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
SFPQP1-201ENST00000446621 FGD5Q6ZNL6 1462 aa22.87■■□□□ 1.25
SFPQP1-201ENST00000446621 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
SFPQP1-201ENST00000446621 SOGA1O94964 1423 aa22.85■■□□□ 1.25
SFPQP1-201ENST00000446621 AQRO60306 1485 aaKnown RBP eCLIP22.84■■□□□ 1.25
SFPQP1-201ENST00000446621 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
SFPQP1-201ENST00000446621 TDRD9Q8NDG6 1382 aaKnown RBP22.77■■□□□ 1.24
SFPQP1-201ENST00000446621 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
SFPQP1-201ENST00000446621 CHD1O14646 1710 aa22.67■■□□□ 1.22
SFPQP1-201ENST00000446621 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
SFPQP1-201ENST00000446621 FBLN2P98095 1184 aa22.66■■□□□ 1.22
SFPQP1-201ENST00000446621 SYNJ1O43426 1573 aa22.64■■□□□ 1.21
SFPQP1-201ENST00000446621 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
SFPQP1-201ENST00000446621 BIVM-ERCC5R4GMW8 1640 aa22.63■■□□□ 1.21
SFPQP1-201ENST00000446621 SNAPC4Q5SXM2 1469 aa22.63■■□□□ 1.21
SFPQP1-201ENST00000446621 ABCA10Q8WWZ4 1543 aa22.6■■□□□ 1.21
SFPQP1-201ENST00000446621 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
SFPQP1-201ENST00000446621 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
SFPQP1-201ENST00000446621 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.21
SFPQP1-201ENST00000446621 PBRM1Q86U86 1689 aa22.58■■□□□ 1.2
SFPQP1-201ENST00000446621 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
SFPQP1-201ENST00000446621 ABCA5Q8WWZ7 1642 aa22.55■■□□□ 1.2
SFPQP1-201ENST00000446621 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
SFPQP1-201ENST00000446621 RIMBP3CA6NJZ7 1639 aa22.51■■□□□ 1.19
SFPQP1-201ENST00000446621 RIMBP3BA6NNM3 1639 aa22.51■■□□□ 1.19
SFPQP1-201ENST00000446621 RIMBP3Q9UFD9 1639 aa22.51■■□□□ 1.19
SFPQP1-201ENST00000446621 SYNJ2O15056 1496 aa22.48■■□□□ 1.19
SFPQP1-201ENST00000446621 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
SFPQP1-201ENST00000446621 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
SFPQP1-201ENST00000446621 ADAMTS12P58397 1594 aa22.36■■□□□ 1.17
SFPQP1-201ENST00000446621 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
SFPQP1-201ENST00000446621 GRIN2AQ12879 1464 aa22.32■■□□□ 1.16
SFPQP1-201ENST00000446621 CYB5RLQ6IPT4 315 aa22.3■■□□□ 1.16
SFPQP1-201ENST00000446621 FHAD1B1AJZ9 1412 aa22.3■■□□□ 1.16
SFPQP1-201ENST00000446621 ARAP1Q96P48 1450 aa22.27■■□□□ 1.15
SFPQP1-201ENST00000446621 CEP170Q5SW79 1584 aa22.22■■□□□ 1.15
SFPQP1-201ENST00000446621 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
SFPQP1-201ENST00000446621 NUP160Q12769 1436 aa22.2■■□□□ 1.14
SFPQP1-201ENST00000446621 IGF1RP08069 1367 aa22.13■■□□□ 1.13
SFPQP1-201ENST00000446621 CUL7Q14999 1698 aa22.11■■□□□ 1.13
SFPQP1-201ENST00000446621 ERCC6L2Q5T890 1561 aa22.08■■□□□ 1.13
SFPQP1-201ENST00000446621 SHROOM2Q13796 1616 aa22.06■■□□□ 1.12
SFPQP1-201ENST00000446621 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
SFPQP1-201ENST00000446621 CARMIL1Q5VZK9 1371 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms