RNA–Protein interactions for RNA: ENST00000446552.1

ATP6AP1-205, Transcript of ATPase H+ transporting accessory protein 1, humanhuman

TSL 4

Gene ATP6AP1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1-205ENST00000446552 NISCHQ9Y2I1 1504 aa61.69■■■■■ 7.47
ATP6AP1-205ENST00000446552 ABCC9O60706 1549 aa55.5■■■■■ 6.47
ATP6AP1-205ENST00000446552 CCDC180Q9P1Z9 1646 aa55.39■■■■■ 6.46
ATP6AP1-205ENST00000446552 RB1CC1Q8TDY2 1594 aa52.75■■■■■ 6.03
ATP6AP1-205ENST00000446552 NACADO15069 1562 aa52.36■■■■■ 5.97
ATP6AP1-205ENST00000446552 DNAJC5BQ9UF47 199 aa52.18■■■■■ 5.94
ATP6AP1-205ENST00000446552 DCAF8L2P0C7V8 631 aa52.05■■■■■ 5.92
ATP6AP1-205ENST00000446552 UNC13AQ9UPW8 1703 aa51.65■■■■■ 5.86
ATP6AP1-205ENST00000446552 PABPN1Q86U42 306 aaKnown RBP eCLIP51.65■■■■■ 5.86
ATP6AP1-205ENST00000446552 MYO15BQ96JP2 1530 aa51.61■■■■■ 5.85
ATP6AP1-205ENST00000446552 BICRAQ9NZM4 1560 aa51.3■■■■■ 5.8
ATP6AP1-205ENST00000446552 ZCCHC6Q5VYS8 1495 aaKnown RBP51.12■■■■■ 5.77
ATP6AP1-205ENST00000446552 DCAF1Q9Y4B6 1507 aa50.93■■■■■ 5.74
ATP6AP1-205ENST00000446552 SCRIBQ14160 1630 aa50.5■■■■■ 5.67
ATP6AP1-205ENST00000446552 SHROOM4Q9ULL8 1493 aa50.49■■■■■ 5.67
ATP6AP1-205ENST00000446552 CC2D2AQ9P2K1 1620 aa50.13■■■■■ 5.62
ATP6AP1-205ENST00000446552 EIF4G1Q04637 1599 aaKnown RBP50■■■■■ 5.6
ATP6AP1-205ENST00000446552 CECR2Q9BXF3 1484 aa49.98■■■■■ 5.59
ATP6AP1-205ENST00000446552 NCAPD3P42695 1498 aa48.35■■■■■ 5.33
ATP6AP1-205ENST00000446552 ATAD2BQ9ULI0 1458 aa48.22■■■■■ 5.31
ATP6AP1-205ENST00000446552 SMARCA4P51532 1647 aa48.16■■■■■ 5.3
ATP6AP1-205ENST00000446552 SMARCA2P51531 1590 aa48.05■■■■■ 5.28
ATP6AP1-205ENST00000446552 HMGXB3Q12766 1538 aa48■■■■■ 5.27
ATP6AP1-205ENST00000446552 DNAJC5Q9H3Z4 198 aa47.91■■■■■ 5.26
ATP6AP1-205ENST00000446552 ERCC6Q03468 1493 aa47.87■■■■■ 5.25
ATP6AP1-205ENST00000446552 BAZ1AQ9NRL2 1556 aaPredicted RBP47.87■■■■■ 5.25
ATP6AP1-205ENST00000446552 CUX2O14529 1486 aa47.83■■■■■ 5.25
ATP6AP1-205ENST00000446552 BAZ1BQ9UIG0 1483 aaKnown RBP47.72■■■■■ 5.23
ATP6AP1-205ENST00000446552 NESP48681 1621 aa47.68■■■■■ 5.22
ATP6AP1-205ENST00000446552 PEG3Q9GZU2 1588 aa47.68■■■■■ 5.22
ATP6AP1-205ENST00000446552 MROH2BQ7Z745 1585 aa47.57■■■■■ 5.21
ATP6AP1-205ENST00000446552 LAMC3Q9Y6N6 1575 aa47.28■■■■■ 5.16
ATP6AP1-205ENST00000446552 THOC2Q8NI27 1593 aaKnown RBP47.21■■■■■ 5.15
ATP6AP1-205ENST00000446552 KIF21AQ7Z4S6 1674 aa47.07■■■■■ 5.13
ATP6AP1-205ENST00000446552 WIZO95785 1651 aa47■■■■■ 5.11
ATP6AP1-205ENST00000446552 PDS5BQ9NTI5 1447 aa46.97■■■■■ 5.11
ATP6AP1-205ENST00000446552 CADPSQ9ULU8 1353 aa46.87■■■■■ 5.09
ATP6AP1-205ENST00000446552 MRC2Q9UBG0 1479 aa46.62■■■■■ 5.05
ATP6AP1-205ENST00000446552 RSF1Q96T23 1441 aaPredicted RBP46.53■■■■■ 5.04
ATP6AP1-205ENST00000446552 WDR62O43379 1518 aa46.52■■■■■ 5.04
ATP6AP1-205ENST00000446552 CEP164Q9UPV0 1460 aa46.4■■■■■ 5.02
ATP6AP1-205ENST00000446552 TOP2AP11388 1531 aaKnown RBP46.37■■■■■ 5.01
ATP6AP1-205ENST00000446552 FANCD2Q9BXW9 1451 aa46.36■■■■■ 5.01
ATP6AP1-205ENST00000446552 CFTRP13569 1480 aa46.34■■■■■ 5.01
ATP6AP1-205ENST00000446552 URB2Q14146 1524 aaKnown RBP46.03■■■■■ 4.96
ATP6AP1-205ENST00000446552 PRDM2Q13029 1718 aa45.89■■■■■ 4.94
ATP6AP1-205ENST00000446552 CCDC88BA6NC98 1476 aa45.85■■■■■ 4.93
ATP6AP1-205ENST00000446552 TRIM41Q8WV44 630 aa45.77■■■■■ 4.92
ATP6AP1-205ENST00000446552 OSCARQ8IYS5 282 aa45.6■■■■■ 4.89
ATP6AP1-205ENST00000446552 TOPBP1Q92547 1522 aa45.48■■■■■ 4.87
ATP6AP1-205ENST00000446552 IFT140Q96RY7 1462 aa45.48■■■■■ 4.87
ATP6AP1-205ENST00000446552 ZNF608Q9ULD9 1512 aaPredicted RBP45.47■■■■■ 4.87
ATP6AP1-205ENST00000446552 ABCC8Q09428 1581 aa45.31■■■■■ 4.84
ATP6AP1-205ENST00000446552 DNMBPQ6XZF7 1577 aa45.3■■■■■ 4.84
ATP6AP1-205ENST00000446552 EIF4G3O43432 1585 aaKnown RBP45.2■■■■■ 4.83
ATP6AP1-205ENST00000446552 TARBP1Q13395 1621 aaKnown RBP45.12■■■■■ 4.81
ATP6AP1-205ENST00000446552 RIMBP3CA6NJZ7 1639 aa45.1■■■■■ 4.81
ATP6AP1-205ENST00000446552 RIMBP3BA6NNM3 1639 aa45.1■■■■■ 4.81
ATP6AP1-205ENST00000446552 RIMBP3Q9UFD9 1639 aa45.1■■■■■ 4.81
ATP6AP1-205ENST00000446552 AQRO60306 1485 aaKnown RBP eCLIP45.03■■■■■ 4.81e-6■■■■□ 20.3
ATP6AP1-205ENST00000446552 POLA1P09884 1462 aaPredicted RBP45.03■■■■■ 4.8
ATP6AP1-205ENST00000446552 ARHGEF11O15085 1522 aa44.94■■■■■ 4.78
ATP6AP1-205ENST00000446552 CHD1O14646 1710 aa44.9■■■■■ 4.78
ATP6AP1-205ENST00000446552 RAD54L2Q9Y4B4 1467 aa44.87■■■■■ 4.77
ATP6AP1-205ENST00000446552 SOGA1O94964 1423 aa44.78■■■■■ 4.76
ATP6AP1-205ENST00000446552 TDRD9Q8NDG6 1382 aaKnown RBP44.73■■■■■ 4.75
ATP6AP1-205ENST00000446552 FGD5Q6ZNL6 1462 aa44.72■■■■■ 4.75
ATP6AP1-205ENST00000446552 FBLN2P98095 1184 aa44.69■■■■■ 4.74
ATP6AP1-205ENST00000446552 CUX1P39880 1505 aa44.69■■■■■ 4.74
ATP6AP1-205ENST00000446552 WDR97A6NE52 1622 aa44.58■■■■■ 4.73
ATP6AP1-205ENST00000446552 CYB5RLQ6IPT4 315 aa44.57■■■■■ 4.73
ATP6AP1-205ENST00000446552 SNAPC4Q5SXM2 1469 aa44.56■■■■■ 4.72
ATP6AP1-205ENST00000446552 ARAP1Q96P48 1450 aa44.51■■■■■ 4.72
ATP6AP1-205ENST00000446552 GRIN2BQ13224 1484 aa44.4■■■■■ 4.7
ATP6AP1-205ENST00000446552 MAGI1Q96QZ7 1491 aaPredicted RBP44.4■■■■■ 4.7
ATP6AP1-205ENST00000446552 SUPT5HO00267 1087 aaKnown RBP44.38■■■■■ 4.7
ATP6AP1-205ENST00000446552 CLASP1Q7Z460 1538 aa44.37■■■■■ 4.69
ATP6AP1-205ENST00000446552 CHMP7Q8WUX9 453 aaPredicted RBP44.34■■■■■ 4.69
ATP6AP1-205ENST00000446552 SYNJ1O43426 1573 aa44.29■■■■■ 4.68
ATP6AP1-205ENST00000446552 SYNJ2O15056 1496 aa44.27■■■■■ 4.68
ATP6AP1-205ENST00000446552 PBRM1Q86U86 1689 aa44.27■■■■■ 4.68
ATP6AP1-205ENST00000446552 GAPVD1Q14C86 1478 aa44.24■■■■■ 4.67
ATP6AP1-205ENST00000446552 ABCA10Q8WWZ4 1543 aa44.2■■■■■ 4.67
ATP6AP1-205ENST00000446552 ABCA5Q8WWZ7 1642 aa44.17■■■■■ 4.66
ATP6AP1-205ENST00000446552 TRHP20396 242 aaPredicted RBP44.08■■■■■ 4.65
ATP6AP1-205ENST00000446552 WRNQ14191 1432 aaPredicted RBP eCLIP43.97■■■■■ 4.63
ATP6AP1-205ENST00000446552 BIVM-ERCC5R4GMW8 1640 aa43.95■■■■■ 4.63
ATP6AP1-205ENST00000446552 TOP2BQ02880 1626 aa43.93■■■■■ 4.62
ATP6AP1-205ENST00000446552 GRIN2AQ12879 1464 aa43.85■■■■■ 4.61
ATP6AP1-205ENST00000446552 ADAMTS12P58397 1594 aa43.84■■■■■ 4.61
ATP6AP1-205ENST00000446552 CEP170Q5SW79 1584 aa43.74■■■■■ 4.59
ATP6AP1-205ENST00000446552 NUP160Q12769 1436 aa43.72■■■■■ 4.59
ATP6AP1-205ENST00000446552 ERCC6L2Q5T890 1561 aa43.71■■■■■ 4.59
ATP6AP1-205ENST00000446552 FHAD1B1AJZ9 1412 aa43.67■■■■■ 4.58
ATP6AP1-205ENST00000446552 ERICH3Q5RHP9 1530 aa43.63■■■■■ 4.57
ATP6AP1-205ENST00000446552 SHROOM2Q13796 1616 aa43.55■■■■■ 4.56
ATP6AP1-205ENST00000446552 PRG4Q92954 1404 aaPredicted RBP43.29■■■■■ 4.52
ATP6AP1-205ENST00000446552 JPH4Q96JJ6 628 aa43.23■■■■■ 4.51
ATP6AP1-205ENST00000446552 RUSC2Q8N2Y8 1516 aa43.22■■■■■ 4.51
ATP6AP1-205ENST00000446552 IGF1RP08069 1367 aa43.06■■■■■ 4.48
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms