RNA–Protein interactions for RNA: ENST00000446406.5

H19-212, H19, imprinted maternally expressed transcript, humanhuman

TSL 5

Gene H19, Length 1,612 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-212ENST00000446406 NISCHQ9Y2I1 1504 aa51.15■■■■■ 5.78
H19-212ENST00000446406 CCDC180Q9P1Z9 1646 aa44.7■■■■■ 4.75
H19-212ENST00000446406 ZCCHC6Q5VYS8 1495 aaKnown RBP43■■■■■ 4.47
H19-212ENST00000446406 DCAF1Q9Y4B6 1507 aa42.46■■■■■ 4.39
H19-212ENST00000446406 ABCC9O60706 1549 aa42.02■■■■■ 4.32
H19-212ENST00000446406 MYO15BQ96JP2 1530 aa42■■■■■ 4.31
H19-212ENST00000446406 DCAF8L2P0C7V8 631 aa41.95■■■■■ 4.31
H19-212ENST00000446406 NACADO15069 1562 aa41.63■■■■■ 4.25
H19-212ENST00000446406 SHROOM4Q9ULL8 1493 aa41.43■■■■■ 4.22
H19-212ENST00000446406 RB1CC1Q8TDY2 1594 aa41.23■■■■■ 4.19
H19-212ENST00000446406 SCRIBQ14160 1630 aa40.9■■■■■ 4.14
H19-212ENST00000446406 UNC13AQ9UPW8 1703 aa40.27■■■■■ 4.04
H19-212ENST00000446406 BICRAQ9NZM4 1560 aa39.91■■■■□ 3.98
H19-212ENST00000446406 SUPT5HO00267 1087 aaKnown RBP39.9■■■■□ 3.98
H19-212ENST00000446406 RSF1Q96T23 1441 aaPredicted RBP39.64■■■■□ 3.94
H19-212ENST00000446406 CECR2Q9BXF3 1484 aa39.62■■■■□ 3.93
H19-212ENST00000446406 PABPN1Q86U42 306 aaKnown RBP eCLIP39.55■■■■□ 3.92
H19-212ENST00000446406 BAZ1AQ9NRL2 1556 aaPredicted RBP39.54■■■■□ 3.92
H19-212ENST00000446406 MROH2BQ7Z745 1585 aa39.43■■■■□ 3.9
H19-212ENST00000446406 SMARCA4P51532 1647 aa39.31■■■■□ 3.88
H19-212ENST00000446406 WIZO95785 1651 aa39.08■■■■□ 3.85
H19-212ENST00000446406 PEG3Q9GZU2 1588 aa38.94■■■■□ 3.82
H19-212ENST00000446406 TOP2AP11388 1531 aaKnown RBP38.81■■■■□ 3.8
H19-212ENST00000446406 SMARCA2P51531 1590 aa38.72■■■■□ 3.79
H19-212ENST00000446406 EIF4G1Q04637 1599 aaKnown RBP38.72■■■■□ 3.79
H19-212ENST00000446406 ATAD2BQ9ULI0 1458 aa38.67■■■■□ 3.78
H19-212ENST00000446406 BAZ1BQ9UIG0 1483 aaKnown RBP38.44■■■■□ 3.74
H19-212ENST00000446406 NCAPD3P42695 1498 aa38.39■■■■□ 3.74
H19-212ENST00000446406 HMGXB3Q12766 1538 aa38.38■■■■□ 3.73
H19-212ENST00000446406 CCDC88BA6NC98 1476 aa38.33■■■■□ 3.73
H19-212ENST00000446406 CHIC1Q5VXU3 224 aa38.3■■■■□ 3.72
H19-212ENST00000446406 CC2D2AQ9P2K1 1620 aa38.11■■■■□ 3.69
H19-212ENST00000446406 TRIM41Q8WV44 630 aa37.63■■■■□ 3.61
H19-212ENST00000446406 CFTRP13569 1480 aa37.53■■■■□ 3.6
H19-212ENST00000446406 ABCC8Q09428 1581 aa37.43■■■■□ 3.58
H19-212ENST00000446406 CADPSQ9ULU8 1353 aa37.37■■■■□ 3.57
H19-212ENST00000446406 PRDM2Q13029 1718 aa37.34■■■■□ 3.57
H19-212ENST00000446406 WRNQ14191 1432 aaPredicted RBP eCLIP37.33■■■■□ 3.57
H19-212ENST00000446406 DNAJC5BQ9UF47 199 aa37.21■■■■□ 3.55
H19-212ENST00000446406 SYNJ1O43426 1573 aa37.11■■■■□ 3.53
H19-212ENST00000446406 LAMC3Q9Y6N6 1575 aa37.09■■■■□ 3.53
H19-212ENST00000446406 TOP2BQ02880 1626 aa37.06■■■■□ 3.52
H19-212ENST00000446406 BIVM-ERCC5R4GMW8 1640 aa37.02■■■■□ 3.52
H19-212ENST00000446406 EEA1Q15075 1411 aa36.93■■■■□ 3.5
H19-212ENST00000446406 FANCD2Q9BXW9 1451 aa36.92■■■■□ 3.5
H19-212ENST00000446406 CUX1P39880 1505 aa36.9■■■■□ 3.5
H19-212ENST00000446406 NESP48681 1621 aa36.88■■■■□ 3.49
H19-212ENST00000446406 PDS5BQ9NTI5 1447 aa36.79■■■■□ 3.48
H19-212ENST00000446406 FAM9AQ8IZU1 332 aaPredicted RBP36.76■■■■□ 3.48
H19-212ENST00000446406 SOGA1O94964 1423 aa36.75■■■■□ 3.47
H19-212ENST00000446406 CEP164Q9UPV0 1460 aa36.71■■■■□ 3.47
H19-212ENST00000446406 LOC105371045A0A1W2PR82 267 aa36.7■■■■□ 3.47
H19-212ENST00000446406 DNMBPQ6XZF7 1577 aa36.64■■■■□ 3.46
H19-212ENST00000446406 RUSC2Q8N2Y8 1516 aa36.56■■■■□ 3.44
H19-212ENST00000446406 CSRNP3Q8WYN3 585 aa36.56■■■■□ 3.44
H19-212ENST00000446406 TOPBP1Q92547 1522 aa36.53■■■■□ 3.44
H19-212ENST00000446406 FGD5Q6ZNL6 1462 aa36.49■■■■□ 3.43
H19-212ENST00000446406 KIF21AQ7Z4S6 1674 aa36.49■■■■□ 3.43
H19-212ENST00000446406 URB2Q14146 1524 aaKnown RBP36.43■■■■□ 3.42
H19-212ENST00000446406 KIF27Q86VH2 1401 aa36.41■■■■□ 3.42
H19-212ENST00000446406 KIF21BO75037 1637 aa36.37■■■■□ 3.41
H19-212ENST00000446406 POLA1P09884 1462 aaPredicted RBP36.34■■■■□ 3.41
H19-212ENST00000446406 GOLGA3Q08378 1498 aa36.31■■■■□ 3.4
H19-212ENST00000446406 MRC2Q9UBG0 1479 aa36.29■■■■□ 3.4
H19-212ENST00000446406 ABCA10Q8WWZ4 1543 aa36.26■■■■□ 3.4
H19-212ENST00000446406 CUX2O14529 1486 aa36.24■■■■□ 3.39
H19-212ENST00000446406 TNIKQ9UKE5 1360 aa36.2■■■■□ 3.39
H19-212ENST00000446406 PRXQ9BXM0 1461 aa36.18■■■■□ 3.38
H19-212ENST00000446406 ERICH3Q5RHP9 1530 aa36.16■■■■□ 3.38
H19-212ENST00000446406 RAD54L2Q9Y4B4 1467 aa36.13■■■■□ 3.37
H19-212ENST00000446406 WDR62O43379 1518 aa36.13■■■■□ 3.37
H19-212ENST00000446406 WDR97A6NE52 1622 aa36.11■■■■□ 3.37
H19-212ENST00000446406 EHMT2Q96KQ7 1210 aa36.1■■■■□ 3.37
H19-212ENST00000446406 ERCC6Q03468 1493 aa36.1■■■■□ 3.37
H19-212ENST00000446406 IGF1RP08069 1367 aa36.05■■■■□ 3.36
H19-212ENST00000446406 RAPGEF2Q9Y4G8 1499 aa36.05■■■■□ 3.36
H19-212ENST00000446406 UBTFP17480 764 aaKnown RBP36.01■■■■□ 3.35
H19-212ENST00000446406 TARBP1Q13395 1621 aaKnown RBP35.99■■■■□ 3.35
H19-212ENST00000446406 THOC2Q8NI27 1593 aaKnown RBP35.97■■■■□ 3.35
H19-212ENST00000446406 CEP162Q5TB80 1403 aa35.94■■■■□ 3.34
H19-212ENST00000446406 ABCA5Q8WWZ7 1642 aa35.94■■■■□ 3.34
H19-212ENST00000446406 IFT140Q96RY7 1462 aa35.88■■■■□ 3.33
H19-212ENST00000446406 CARMIL1Q5VZK9 1371 aa35.87■■■■□ 3.33
H19-212ENST00000446406 CUL7Q14999 1698 aa35.85■■■■□ 3.33
H19-212ENST00000446406 GAPVD1Q14C86 1478 aa35.84■■■■□ 3.33
H19-212ENST00000446406 TDRD9Q8NDG6 1382 aaKnown RBP35.78■■■■□ 3.32
H19-212ENST00000446406 CLIP1P30622 1438 aa35.68■■■■□ 3.3
H19-212ENST00000446406 PBRM1Q86U86 1689 aa35.61■■■■□ 3.29
H19-212ENST00000446406 GRIN2BQ13224 1484 aa35.59■■■■□ 3.29
H19-212ENST00000446406 AQRO60306 1485 aaKnown RBP eCLIP35.56■■■■□ 3.28
H19-212ENST00000446406 ZNF608Q9ULD9 1512 aaPredicted RBP35.53■■■■□ 3.28
H19-212ENST00000446406 FHAD1B1AJZ9 1412 aa35.49■■■■□ 3.27
H19-212ENST00000446406 EIF4G3O43432 1585 aaKnown RBP35.48■■■■□ 3.27
H19-212ENST00000446406 ADAMTS12P58397 1594 aa35.47■■■■□ 3.27
H19-212ENST00000446406 VPS8Q8N3P4 1428 aa35.41■■■■□ 3.26
H19-212ENST00000446406 CTTNBP2Q8WZ74 1663 aa35.39■■■■□ 3.26
H19-212ENST00000446406 MAGI1Q96QZ7 1491 aaPredicted RBP35.34■■■■□ 3.25
H19-212ENST00000446406 ARAP1Q96P48 1450 aa35.32■■■■□ 3.25
H19-212ENST00000446406 ARHGAP35Q9NRY4 1499 aa35.32■■■■□ 3.25
H19-212ENST00000446406 SNAPC4Q5SXM2 1469 aa35.28■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms