RNA–Protein interactions for RNA: ENST00000446054.1

HMGN2P11-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 11, humanhuman

BASIC

Gene HMGN2P11, Length 403 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P11-201ENST00000446054 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
HMGN2P11-201ENST00000446054 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
HMGN2P11-201ENST00000446054 ABCC9O60706 1549 aa24.1■■□□□ 1.45
HMGN2P11-201ENST00000446054 RB1CC1Q8TDY2 1594 aa22.98■■□□□ 1.27
HMGN2P11-201ENST00000446054 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
HMGN2P11-201ENST00000446054 NACADO15069 1562 aa22.87■■□□□ 1.25
HMGN2P11-201ENST00000446054 MYO15BQ96JP2 1530 aa22.6■■□□□ 1.21
HMGN2P11-201ENST00000446054 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
HMGN2P11-201ENST00000446054 UNC13AQ9UPW8 1703 aa22.52■■□□□ 1.2
HMGN2P11-201ENST00000446054 PABPN1Q86U42 306 aaKnown RBP eCLIP22.51■■□□□ 1.19
HMGN2P11-201ENST00000446054 DNAJC5BQ9UF47 199 aa22.46■■□□□ 1.19
HMGN2P11-201ENST00000446054 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
HMGN2P11-201ENST00000446054 BICRAQ9NZM4 1560 aa22.34■■□□□ 1.17
HMGN2P11-201ENST00000446054 SCRIBQ14160 1630 aa22.16■■□□□ 1.14
HMGN2P11-201ENST00000446054 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
HMGN2P11-201ENST00000446054 CC2D2AQ9P2K1 1620 aa21.76■■□□□ 1.07
HMGN2P11-201ENST00000446054 EIF4G1Q04637 1599 aaKnown RBP21.75■■□□□ 1.07
HMGN2P11-201ENST00000446054 CECR2Q9BXF3 1484 aa21.65■■□□□ 1.06
HMGN2P11-201ENST00000446054 SMARCA4P51532 1647 aa21.14■□□□□ 0.97
HMGN2P11-201ENST00000446054 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
HMGN2P11-201ENST00000446054 ATAD2BQ9ULI0 1458 aa21.1■□□□□ 0.97
HMGN2P11-201ENST00000446054 BAZ1AQ9NRL2 1556 aaPredicted RBP21.05■□□□□ 0.96
HMGN2P11-201ENST00000446054 SMARCA2P51531 1590 aa21.02■□□□□ 0.96
HMGN2P11-201ENST00000446054 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
HMGN2P11-201ENST00000446054 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
HMGN2P11-201ENST00000446054 BAZ1BQ9UIG0 1483 aaKnown RBP20.91■□□□□ 0.94
HMGN2P11-201ENST00000446054 PEG3Q9GZU2 1588 aa20.9■□□□□ 0.94
HMGN2P11-201ENST00000446054 NESP48681 1621 aa20.78■□□□□ 0.92
HMGN2P11-201ENST00000446054 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
HMGN2P11-201ENST00000446054 WIZO95785 1651 aa20.73■□□□□ 0.91
HMGN2P11-201ENST00000446054 CUX2O14529 1486 aa20.62■□□□□ 0.89
HMGN2P11-201ENST00000446054 LAMC3Q9Y6N6 1575 aa20.61■□□□□ 0.89
HMGN2P11-201ENST00000446054 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
HMGN2P11-201ENST00000446054 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
HMGN2P11-201ENST00000446054 KIF21AQ7Z4S6 1674 aa20.5■□□□□ 0.87
HMGN2P11-201ENST00000446054 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
HMGN2P11-201ENST00000446054 THOC2Q8NI27 1593 aaKnown RBP20.47■□□□□ 0.87
HMGN2P11-201ENST00000446054 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
HMGN2P11-201ENST00000446054 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
HMGN2P11-201ENST00000446054 CFTRP13569 1480 aa20.3■□□□□ 0.84
HMGN2P11-201ENST00000446054 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
HMGN2P11-201ENST00000446054 FANCD2Q9BXW9 1451 aa20.27■□□□□ 0.84
HMGN2P11-201ENST00000446054 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
HMGN2P11-201ENST00000446054 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
HMGN2P11-201ENST00000446054 WDR62O43379 1518 aa20.23■□□□□ 0.83
HMGN2P11-201ENST00000446054 PRDM2Q13029 1718 aa20.12■□□□□ 0.81
HMGN2P11-201ENST00000446054 URB2Q14146 1524 aaKnown RBP20.11■□□□□ 0.81
HMGN2P11-201ENST00000446054 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
HMGN2P11-201ENST00000446054 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
HMGN2P11-201ENST00000446054 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
HMGN2P11-201ENST00000446054 IFT140Q96RY7 1462 aa19.85■□□□□ 0.77
HMGN2P11-201ENST00000446054 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
HMGN2P11-201ENST00000446054 ZNF608Q9ULD9 1512 aaPredicted RBP19.83■□□□□ 0.77
HMGN2P11-201ENST00000446054 OSCARQ8IYS5 282 aa19.76■□□□□ 0.75
HMGN2P11-201ENST00000446054 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
HMGN2P11-201ENST00000446054 TARBP1Q13395 1621 aaKnown RBP19.73■□□□□ 0.75
HMGN2P11-201ENST00000446054 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
HMGN2P11-201ENST00000446054 AQRO60306 1485 aaKnown RBP eCLIP19.69■□□□□ 0.74
HMGN2P11-201ENST00000446054 RAD54L2Q9Y4B4 1467 aa19.68■□□□□ 0.74
HMGN2P11-201ENST00000446054 CUX1P39880 1505 aa19.66■□□□□ 0.74
HMGN2P11-201ENST00000446054 SOGA1O94964 1423 aa19.66■□□□□ 0.74
HMGN2P11-201ENST00000446054 TRIM41Q8WV44 630 aa19.64■□□□□ 0.73
HMGN2P11-201ENST00000446054 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
HMGN2P11-201ENST00000446054 TDRD9Q8NDG6 1382 aaKnown RBP19.61■□□□□ 0.73
HMGN2P11-201ENST00000446054 CHD1O14646 1710 aa19.54■□□□□ 0.72
HMGN2P11-201ENST00000446054 FBLN2P98095 1184 aa19.53■□□□□ 0.72
HMGN2P11-201ENST00000446054 WDR97A6NE52 1622 aa19.47■□□□□ 0.71
HMGN2P11-201ENST00000446054 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
HMGN2P11-201ENST00000446054 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
HMGN2P11-201ENST00000446054 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
HMGN2P11-201ENST00000446054 SNAPC4Q5SXM2 1469 aa19.47■□□□□ 0.71
HMGN2P11-201ENST00000446054 GRIN2BQ13224 1484 aa19.43■□□□□ 0.7
HMGN2P11-201ENST00000446054 ARHGEF11O15085 1522 aa19.42■□□□□ 0.7
HMGN2P11-201ENST00000446054 ABCA10Q8WWZ4 1543 aa19.41■□□□□ 0.7
HMGN2P11-201ENST00000446054 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
HMGN2P11-201ENST00000446054 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
HMGN2P11-201ENST00000446054 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
HMGN2P11-201ENST00000446054 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
HMGN2P11-201ENST00000446054 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
HMGN2P11-201ENST00000446054 TOP2BQ02880 1626 aa19.39■□□□□ 0.69
HMGN2P11-201ENST00000446054 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
HMGN2P11-201ENST00000446054 PBRM1Q86U86 1689 aa19.39■□□□□ 0.69
HMGN2P11-201ENST00000446054 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
HMGN2P11-201ENST00000446054 SYNJ2O15056 1496 aa19.34■□□□□ 0.69
HMGN2P11-201ENST00000446054 CYB5RLQ6IPT4 315 aa19.32■□□□□ 0.68
HMGN2P11-201ENST00000446054 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
HMGN2P11-201ENST00000446054 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
HMGN2P11-201ENST00000446054 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
HMGN2P11-201ENST00000446054 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
HMGN2P11-201ENST00000446054 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
HMGN2P11-201ENST00000446054 FHAD1B1AJZ9 1412 aa19.16■□□□□ 0.66
HMGN2P11-201ENST00000446054 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
HMGN2P11-201ENST00000446054 NUP160Q12769 1436 aa19.11■□□□□ 0.65
HMGN2P11-201ENST00000446054 ERCC6L2Q5T890 1561 aa19.06■□□□□ 0.64
HMGN2P11-201ENST00000446054 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
HMGN2P11-201ENST00000446054 KIF27Q86VH2 1401 aa19.02■□□□□ 0.64
HMGN2P11-201ENST00000446054 IGF1RP08069 1367 aa19.01■□□□□ 0.63
HMGN2P11-201ENST00000446054 SHROOM2Q13796 1616 aa19■□□□□ 0.63
HMGN2P11-201ENST00000446054 JPH4Q96JJ6 628 aa18.96■□□□□ 0.63
HMGN2P11-201ENST00000446054 PRG4Q92954 1404 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms