RNA–Protein interactions for RNA: ENST00000446031.1

CAP1-215, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

TSL 3

Gene CAP1, Length 273 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-215ENST00000446031 NISCHQ9Y2I1 1504 aa27.57■■■□□ 2
CAP1-215ENST00000446031 ABCC9O60706 1549 aa25.51■■□□□ 1.67
CAP1-215ENST00000446031 CCDC180Q9P1Z9 1646 aa24.98■■□□□ 1.59
CAP1-215ENST00000446031 DNAJC5BQ9UF47 199 aa24.34■■□□□ 1.49
CAP1-215ENST00000446031 RB1CC1Q8TDY2 1594 aa24.05■■□□□ 1.44
CAP1-215ENST00000446031 NACADO15069 1562 aa23.74■■□□□ 1.39
CAP1-215ENST00000446031 PABPN1Q86U42 306 aaKnown RBP eCLIP23.67■■□□□ 1.38
CAP1-215ENST00000446031 DCAF8L2P0C7V8 631 aa23.58■■□□□ 1.37
CAP1-215ENST00000446031 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
CAP1-215ENST00000446031 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
CAP1-215ENST00000446031 MYO15BQ96JP2 1530 aa23.21■■□□□ 1.31
CAP1-215ENST00000446031 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
CAP1-215ENST00000446031 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
CAP1-215ENST00000446031 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
CAP1-215ENST00000446031 EIF4G1Q04637 1599 aaKnown RBP22.83■■□□□ 1.25
CAP1-215ENST00000446031 DNAJC5Q9H3Z4 198 aa22.76■■□□□ 1.23
CAP1-215ENST00000446031 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
CAP1-215ENST00000446031 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
CAP1-215ENST00000446031 DCAF1Q9Y4B6 1507 aa22.72■■□□□ 1.23
CAP1-215ENST00000446031 CUX2O14529 1486 aa22.2■■□□□ 1.14
CAP1-215ENST00000446031 ERCC6Q03468 1493 aa22.1■■□□□ 1.13
CAP1-215ENST00000446031 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
CAP1-215ENST00000446031 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.08
CAP1-215ENST00000446031 NESP48681 1621 aa21.74■■□□□ 1.07
CAP1-215ENST00000446031 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
CAP1-215ENST00000446031 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
CAP1-215ENST00000446031 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
CAP1-215ENST00000446031 THOC2Q8NI27 1593 aaKnown RBP21.63■■□□□ 1.05
CAP1-215ENST00000446031 TRIM41Q8WV44 630 aa21.62■■□□□ 1.05
CAP1-215ENST00000446031 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
CAP1-215ENST00000446031 LAMC3Q9Y6N6 1575 aa21.53■■□□□ 1.04
CAP1-215ENST00000446031 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
CAP1-215ENST00000446031 KIF21AQ7Z4S6 1674 aa21.46■■□□□ 1.03
CAP1-215ENST00000446031 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
CAP1-215ENST00000446031 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
CAP1-215ENST00000446031 MRC2Q9UBG0 1479 aa21.27■■□□□ 1
CAP1-215ENST00000446031 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
CAP1-215ENST00000446031 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
CAP1-215ENST00000446031 WDR62O43379 1518 aa21.22■□□□□ 0.99
CAP1-215ENST00000446031 OSCARQ8IYS5 282 aa21.11■□□□□ 0.97
CAP1-215ENST00000446031 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
CAP1-215ENST00000446031 FANCD2Q9BXW9 1451 aa21.01■□□□□ 0.95
CAP1-215ENST00000446031 WIZO95785 1651 aa20.97■□□□□ 0.95
CAP1-215ENST00000446031 RIMBP3CA6NJZ7 1639 aa20.89■□□□□ 0.93
CAP1-215ENST00000446031 RIMBP3BA6NNM3 1639 aa20.89■□□□□ 0.93
CAP1-215ENST00000446031 RIMBP3Q9UFD9 1639 aa20.89■□□□□ 0.93
CAP1-215ENST00000446031 CFTRP13569 1480 aa20.87■□□□□ 0.93
CAP1-215ENST00000446031 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
CAP1-215ENST00000446031 ARHGEF11O15085 1522 aa20.76■□□□□ 0.91
CAP1-215ENST00000446031 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
CAP1-215ENST00000446031 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
CAP1-215ENST00000446031 TOP2AP11388 1531 aaKnown RBP20.67■□□□□ 0.9
CAP1-215ENST00000446031 CYB5RLQ6IPT4 315 aa20.66■□□□□ 0.9
CAP1-215ENST00000446031 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
CAP1-215ENST00000446031 PRDM2Q13029 1718 aa20.64■□□□□ 0.9
CAP1-215ENST00000446031 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
CAP1-215ENST00000446031 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
CAP1-215ENST00000446031 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
CAP1-215ENST00000446031 ARAP1Q96P48 1450 aa20.51■□□□□ 0.87
CAP1-215ENST00000446031 CHD1O14646 1710 aa20.51■□□□□ 0.87
CAP1-215ENST00000446031 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
CAP1-215ENST00000446031 FBLN2P98095 1184 aa20.47■□□□□ 0.87
CAP1-215ENST00000446031 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
CAP1-215ENST00000446031 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.861e-6■■■■□ 26.4
CAP1-215ENST00000446031 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
CAP1-215ENST00000446031 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
CAP1-215ENST00000446031 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
CAP1-215ENST00000446031 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
CAP1-215ENST00000446031 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
CAP1-215ENST00000446031 TDRD9Q8NDG6 1382 aaKnown RBP20.23■□□□□ 0.83
CAP1-215ENST00000446031 CLASP1Q7Z460 1538 aa20.23■□□□□ 0.83
CAP1-215ENST00000446031 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
CAP1-215ENST00000446031 SYNJ1O43426 1573 aa20.22■□□□□ 0.83
CAP1-215ENST00000446031 CHMP7Q8WUX9 453 aaPredicted RBP20.21■□□□□ 0.83
CAP1-215ENST00000446031 SOGA1O94964 1423 aa20.2■□□□□ 0.82
CAP1-215ENST00000446031 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
CAP1-215ENST00000446031 MAGI1Q96QZ7 1491 aaPredicted RBP20.14■□□□□ 0.81
CAP1-215ENST00000446031 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
CAP1-215ENST00000446031 SYNJ2O15056 1496 aa20.09■□□□□ 0.81
CAP1-215ENST00000446031 GRIN2BQ13224 1484 aa20.09■□□□□ 0.81
CAP1-215ENST00000446031 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.81
CAP1-215ENST00000446031 PBRM1Q86U86 1689 aa19.99■□□□□ 0.79
CAP1-215ENST00000446031 CUX1P39880 1505 aa19.98■□□□□ 0.79
CAP1-215ENST00000446031 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
CAP1-215ENST00000446031 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
CAP1-215ENST00000446031 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.77
CAP1-215ENST00000446031 GRIN2AQ12879 1464 aa19.83■□□□□ 0.76
CAP1-215ENST00000446031 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
CAP1-215ENST00000446031 KIF13AQ9H1H9 1805 aa19.78■□□□□ 0.76
CAP1-215ENST00000446031 NUP160Q12769 1436 aa19.76■□□□□ 0.75
CAP1-215ENST00000446031 ADAMTS12P58397 1594 aa19.75■□□□□ 0.75
CAP1-215ENST00000446031 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
CAP1-215ENST00000446031 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
CAP1-215ENST00000446031 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
CAP1-215ENST00000446031 FAM69CQ0P6D2 419 aa19.65■□□□□ 0.74
CAP1-215ENST00000446031 PRG4Q92954 1404 aaPredicted RBP19.64■□□□□ 0.73
CAP1-215ENST00000446031 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
CAP1-215ENST00000446031 ABCC10Q5T3U5 1492 aa19.61■□□□□ 0.73
CAP1-215ENST00000446031 ERICH3Q5RHP9 1530 aa19.58■□□□□ 0.73
CAP1-215ENST00000446031 JPH4Q96JJ6 628 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms