RNA–Protein interactions for RNA: ENST00000445923.1

SS18L2P1-201, Transcript of SS18 like 2 pseudogene 1, humanhuman

BASIC

Gene SS18L2P1, Length 213 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2P1-201ENST00000445923 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
SS18L2P1-201ENST00000445923 CCDC180Q9P1Z9 1646 aa15.34■□□□□ 0.05
SS18L2P1-201ENST00000445923 ZCCHC6Q5VYS8 1495 aaKnown RBP14.58□□□□□ -0.08
SS18L2P1-201ENST00000445923 ABCC9O60706 1549 aa14.58□□□□□ -0.08
SS18L2P1-201ENST00000445923 DCAF1Q9Y4B6 1507 aa14.51□□□□□ -0.09
SS18L2P1-201ENST00000445923 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.09
SS18L2P1-201ENST00000445923 NACADO15069 1562 aa14.38□□□□□ -0.11
SS18L2P1-201ENST00000445923 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
SS18L2P1-201ENST00000445923 RB1CC1Q8TDY2 1594 aa14.27□□□□□ -0.12
SS18L2P1-201ENST00000445923 SCRIBQ14160 1630 aa13.93□□□□□ -0.18
SS18L2P1-201ENST00000445923 UNC13AQ9UPW8 1703 aa13.88□□□□□ -0.19
SS18L2P1-201ENST00000445923 SHROOM4Q9ULL8 1493 aa13.86□□□□□ -0.19
SS18L2P1-201ENST00000445923 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
SS18L2P1-201ENST00000445923 PABPN1Q86U42 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
SS18L2P1-201ENST00000445923 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
SS18L2P1-201ENST00000445923 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
SS18L2P1-201ENST00000445923 SMARCA4P51532 1647 aa13.42□□□□□ -0.26
SS18L2P1-201ENST00000445923 RSF1Q96T23 1441 aaPredicted RBP13.41□□□□□ -0.26
SS18L2P1-201ENST00000445923 EIF4G1Q04637 1599 aaKnown RBP13.4□□□□□ -0.26
SS18L2P1-201ENST00000445923 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
SS18L2P1-201ENST00000445923 PEG3Q9GZU2 1588 aa13.34□□□□□ -0.27
SS18L2P1-201ENST00000445923 SMARCA2P51531 1590 aa13.31□□□□□ -0.28
SS18L2P1-201ENST00000445923 ATAD2BQ9ULI0 1458 aa13.29□□□□□ -0.28
SS18L2P1-201ENST00000445923 SUPT5HO00267 1087 aaKnown RBP13.28□□□□□ -0.28
SS18L2P1-201ENST00000445923 NCAPD3P42695 1498 aa13.27□□□□□ -0.29
SS18L2P1-201ENST00000445923 WIZO95785 1651 aa13.24□□□□□ -0.29
SS18L2P1-201ENST00000445923 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
SS18L2P1-201ENST00000445923 HMGXB3Q12766 1538 aa13.21□□□□□ -0.29
SS18L2P1-201ENST00000445923 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
SS18L2P1-201ENST00000445923 TOP2AP11388 1531 aaKnown RBP13.17□□□□□ -0.3
SS18L2P1-201ENST00000445923 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
SS18L2P1-201ENST00000445923 CCDC88BA6NC98 1476 aa13.02□□□□□ -0.33
SS18L2P1-201ENST00000445923 CADPSQ9ULU8 1353 aa12.89□□□□□ -0.35
SS18L2P1-201ENST00000445923 CFTRP13569 1480 aa12.88□□□□□ -0.35
SS18L2P1-201ENST00000445923 LAMC3Q9Y6N6 1575 aa12.83□□□□□ -0.36
SS18L2P1-201ENST00000445923 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
SS18L2P1-201ENST00000445923 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
SS18L2P1-201ENST00000445923 NESP48681 1621 aa12.72□□□□□ -0.37
SS18L2P1-201ENST00000445923 FANCD2Q9BXW9 1451 aa12.7□□□□□ -0.38
SS18L2P1-201ENST00000445923 CHIC1Q5VXU3 224 aa12.67□□□□□ -0.38
SS18L2P1-201ENST00000445923 ABCC8Q09428 1581 aa12.64□□□□□ -0.39
SS18L2P1-201ENST00000445923 CEP164Q9UPV0 1460 aa12.64□□□□□ -0.39
SS18L2P1-201ENST00000445923 WRNQ14191 1432 aaPredicted RBP eCLIP12.63□□□□□ -0.39
SS18L2P1-201ENST00000445923 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
SS18L2P1-201ENST00000445923 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
SS18L2P1-201ENST00000445923 ERCC6Q03468 1493 aa12.57□□□□□ -0.4
SS18L2P1-201ENST00000445923 TOP2BQ02880 1626 aa12.56□□□□□ -0.4
SS18L2P1-201ENST00000445923 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
SS18L2P1-201ENST00000445923 CUX1P39880 1505 aa12.55□□□□□ -0.4
SS18L2P1-201ENST00000445923 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
SS18L2P1-201ENST00000445923 BIVM-ERCC5R4GMW8 1640 aa12.55□□□□□ -0.4
SS18L2P1-201ENST00000445923 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.4
SS18L2P1-201ENST00000445923 TOPBP1Q92547 1522 aa12.52□□□□□ -0.4
SS18L2P1-201ENST00000445923 SYNJ1O43426 1573 aa12.52□□□□□ -0.4
SS18L2P1-201ENST00000445923 WDR62O43379 1518 aa12.5□□□□□ -0.41
SS18L2P1-201ENST00000445923 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
SS18L2P1-201ENST00000445923 FGD5Q6ZNL6 1462 aa12.45□□□□□ -0.42
SS18L2P1-201ENST00000445923 POLA1P09884 1462 aaPredicted RBP12.44□□□□□ -0.42
SS18L2P1-201ENST00000445923 SOGA1O94964 1423 aa12.43□□□□□ -0.42
SS18L2P1-201ENST00000445923 EEA1Q15075 1411 aa12.42□□□□□ -0.42
SS18L2P1-201ENST00000445923 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
SS18L2P1-201ENST00000445923 IFT140Q96RY7 1462 aa12.4□□□□□ -0.43
SS18L2P1-201ENST00000445923 CUX2O14529 1486 aa12.39□□□□□ -0.43
SS18L2P1-201ENST00000445923 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
SS18L2P1-201ENST00000445923 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
SS18L2P1-201ENST00000445923 TARBP1Q13395 1621 aaKnown RBP12.36□□□□□ -0.43
SS18L2P1-201ENST00000445923 RAD54L2Q9Y4B4 1467 aa12.35□□□□□ -0.43
SS18L2P1-201ENST00000445923 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
SS18L2P1-201ENST00000445923 GAPVD1Q14C86 1478 aa12.28□□□□□ -0.44
SS18L2P1-201ENST00000445923 IGF1RP08069 1367 aa12.28□□□□□ -0.44
SS18L2P1-201ENST00000445923 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.44
SS18L2P1-201ENST00000445923 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
SS18L2P1-201ENST00000445923 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.45
SS18L2P1-201ENST00000445923 RUSC2Q8N2Y8 1516 aa12.27□□□□□ -0.45
SS18L2P1-201ENST00000445923 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
SS18L2P1-201ENST00000445923 ZNF608Q9ULD9 1512 aaPredicted RBP12.23□□□□□ -0.45
SS18L2P1-201ENST00000445923 AQRO60306 1485 aaKnown RBP eCLIP12.23□□□□□ -0.45
SS18L2P1-201ENST00000445923 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
SS18L2P1-201ENST00000445923 PRXQ9BXM0 1461 aa12.21□□□□□ -0.45
SS18L2P1-201ENST00000445923 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.45
SS18L2P1-201ENST00000445923 CUL7Q14999 1698 aa12.19□□□□□ -0.46
SS18L2P1-201ENST00000445923 EIF4G3O43432 1585 aaKnown RBP12.19□□□□□ -0.46
SS18L2P1-201ENST00000445923 KIF21BO75037 1637 aa12.19□□□□□ -0.46
SS18L2P1-201ENST00000445923 MAGI1Q96QZ7 1491 aaPredicted RBP12.18□□□□□ -0.46
SS18L2P1-201ENST00000445923 FHAD1B1AJZ9 1412 aa12.18□□□□□ -0.46
SS18L2P1-201ENST00000445923 PBRM1Q86U86 1689 aa12.17□□□□□ -0.46
SS18L2P1-201ENST00000445923 RAPGEF2Q9Y4G8 1499 aa12.17□□□□□ -0.46
SS18L2P1-201ENST00000445923 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
SS18L2P1-201ENST00000445923 SNAPC4Q5SXM2 1469 aa12.12□□□□□ -0.47
SS18L2P1-201ENST00000445923 ADAMTS12P58397 1594 aa12.11□□□□□ -0.47
SS18L2P1-201ENST00000445923 SYNJ2O15056 1496 aa12.11□□□□□ -0.47
SS18L2P1-201ENST00000445923 TNIKQ9UKE5 1360 aa12.1□□□□□ -0.47
SS18L2P1-201ENST00000445923 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
SS18L2P1-201ENST00000445923 CHMP7Q8WUX9 453 aaPredicted RBP12.09□□□□□ -0.47
SS18L2P1-201ENST00000445923 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
SS18L2P1-201ENST00000445923 GRIN2AQ12879 1464 aa12.06□□□□□ -0.48
SS18L2P1-201ENST00000445923 NUP160Q12769 1436 aa12.02□□□□□ -0.49
SS18L2P1-201ENST00000445923 FBLN2P98095 1184 aa12.01□□□□□ -0.49
SS18L2P1-201ENST00000445923 KIAA0586Q9BVV6 1533 aa12.01□□□□□ -0.49
SS18L2P1-201ENST00000445923 CTTNBP2Q8WZ74 1663 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms